| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is devB [H]
Identifier: 46446453
GI number: 46446453
Start: 1001027
End: 1001665
Strand: Reverse
Name: devB [H]
Synonym: pc0819
Alternate gene names: 46446453
Gene position: 1001665-1001027 (Counterclockwise)
Preceding gene: 46446454
Following gene: 46446452
Centisome position: 41.49
GC content: 38.5
Gene sequence:
>639_bases TTGTTTACAGTGGCTTTATCAGGAGGACAAACCCCTAATGCTATTTTTAAAGAATTGAGTCAACAAGACTATTTAAAGCA ATTGGACTGGACTAAAGTGTTCTGTTTTTGGAGTGATGAAAGGAGCGTTCCTCCGACAGATACGGAGAGCAATTATGCCA TGGCTATGGAATCTGGCCTCGCTAAACTTCCTTTAAAAAGAGAACATATTTTTCGCATGAAAGCAGAAAGTGACATTGAA GAGAACGCTCTCGAGTACGAAGCCATCATACGTGAAAAAGTCTCTTCTAATAGCTTTGATTTATTAATGCTAGGAATGGG AGATGATGGTCATACAGCATCACTTTTTCCTCATACGCAAGGCTTACACGCAAAAGATCGTCTAGTCATTGCTAATTACG TTCCCCAAAAACATACTTGGCGCATGTCTTTGACCTATGAATGTATTCATTTGGCTAAAACGATTTGTATTTACGCCATG GGAAAGAAAAAAGCCAATATGGTTGCTCAAGCATTAACAAAAAGCTATGATCCAGATAACCTTCCCATCCAACGTATTGG TACAACACATCATAAAGCTCTATGGATTTTAGATCATGAAGCTGGTGAAAAACTCTTGCAAATTTTCCAAAGACGGTAA
Upstream 100 bases:
>100_bases AAGGCGTAATTTTATCGTTGTTGGAAATGCAGAAGAAACAATTCAATTTTGCGTAAAACAATTCATAGAAATTGCGCAAG AGGCAATTGAAAAACGGGGT
Downstream 100 bases:
>100_bases ACACTTAAGACAAAAATCCACAAAAATGAAATAGTTTAGACCTTATGTTAGTTTTGGGAATAGAAAGTACTTGTGATGAA ACAGCGTGTGCCATCGTTCG
Product: putative 6-phosphogluconolactonase (6PGL).
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFTVALSGGQTPNAIFKELSQQDYLKQLDWTKVFCFWSDERSVPPTDTESNYAMAMESGLAKLPLKREHIFRMKAESDIE ENALEYEAIIREKVSSNSFDLLMLGMGDDGHTASLFPHTQGLHAKDRLVIANYVPQKHTWRMSLTYECIHLAKTICIYAM GKKKANMVAQALTKSYDPDNLPIQRIGTTHHKALWILDHEAGEKLLQIFQRR
Sequences:
>Translated_212_residues MFTVALSGGQTPNAIFKELSQQDYLKQLDWTKVFCFWSDERSVPPTDTESNYAMAMESGLAKLPLKREHIFRMKAESDIE ENALEYEAIIREKVSSNSFDLLMLGMGDDGHTASLFPHTQGLHAKDRLVIANYVPQKHTWRMSLTYECIHLAKTICIYAM GKKKANMVAQALTKSYDPDNLPIQRIGTTHHKALWILDHEAGEKLLQIFQRR >Mature_212_residues MFTVALSGGQTPNAIFKELSQQDYLKQLDWTKVFCFWSDERSVPPTDTESNYAMAMESGLAKLPLKREHIFRMKAESDIE ENALEYEAIIREKVSSNSFDLLMLGMGDDGHTASLFPHTQGLHAKDRLVIANYVPQKHTWRMSLTYECIHLAKTICIYAM GKKKANMVAQALTKSYDPDNLPIQRIGTTHHKALWILDHEAGEKLLQIFQRR
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=209, Percent_Identity=32.5358851674641, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI6912586, Length=218, Percent_Identity=30.2752293577982, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI115533060, Length=178, Percent_Identity=29.7752808988764, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533058, Length=178, Percent_Identity=29.7752808988764, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321957, Length=217, Percent_Identity=31.7972350230415, Blast_Score=89, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321687, Length=216, Percent_Identity=30.0925925925926, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6319918, Length=181, Percent_Identity=29.8342541436464, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324362, Length=180, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI24641119, Length=208, Percent_Identity=33.1730769230769, Blast_Score=90, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24260; Mature: 24260
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVALSGGQTPNAIFKELSQQDYLKQLDWTKVFCFWSDERSVPPTDTESNYAMAMESGL CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCH AKLPLKREHIFRMKAESDIEENALEYEAIIREKVSSNSFDLLMLGMGDDGHTASLFPHTQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCC GLHAKDRLVIANYVPQKHTWRMSLTYECIHLAKTICIYAMGKKKANMVAQALTKSYDPDN CCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC LPIQRIGTTHHKALWILDHEAGEKLLQIFQRR CCHHHCCCCCCEEEEEEECHHHHHHHHHHHCC >Mature Secondary Structure MFTVALSGGQTPNAIFKELSQQDYLKQLDWTKVFCFWSDERSVPPTDTESNYAMAMESGL CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCH AKLPLKREHIFRMKAESDIEENALEYEAIIREKVSSNSFDLLMLGMGDDGHTASLFPHTQ HHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCC GLHAKDRLVIANYVPQKHTWRMSLTYECIHLAKTICIYAMGKKKANMVAQALTKSYDPDN CCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC LPIQRIGTTHHKALWILDHEAGEKLLQIFQRR CCHHHCCCCCCEEEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]