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The map label for this gene is livS [H]

Identifier: 46446426

GI number: 46446426

Start: 972368

End: 973666

Strand: Reverse

Name: livS [H]

Synonym: pc0792

Alternate gene names: 46446426

Gene position: 973666-972368 (Counterclockwise)

Preceding gene: 46446427

Following gene: 46446425

Centisome position: 40.33

GC content: 38.11

Gene sequence:

>1299_bases
ATGTATTCAACTGAATTAGCTATTTTGGGTGGGCCAAAAGCTTTTAAAAAAGCTTTTGAAGAAAAATGGCAACGACCCAA
AGATAAAGAAAAAAAACTCATTAATACATTAATTGATCGGGATGAATTATCAGGATCTGGATTTGGAATCAGTCTAGATT
TTGAACAAGCTTTCGCTTCTTATATTGGATGTCAGTATTGCTTATCATTCAGTCATGGGACAGCTGCATTAATGGCCGCT
TATTTTGCAGCTGGAATAGGGCCAGGAGATGAAGTTTTAACACCGGCTGTTGGTTATATCGCGAGTTACTCAGGGGCGAT
TCATATGGGGGCCCGCCCAATTTTCTGTGATATTGACCCCTCGTCCTTATTAATTAATCCTCAAGAAATTCAAAAAAAAA
TTTCTCTGCGTACCAAAGCTATCAATATTACAGATCTAAATGGACGTATTTGCGACCTTGATAAGATCCTTTCTCTTGCT
AACCATAAAGGAATTCCTGTTGTTGAAGATGCCTCTCATGCTCATGGAGGATATTGGAATAAAAAAAAGATCGGTAATTT
TTCGCATGCAACTTGCTTCAGTTTGCAAGGTGTCAATCCAATGGGTAAAGCTGTTGCTGGAGGCGAAGGGGGTGTTGTGT
GTACAAATGATCAAGACATTTACCAAGCTATGCTGGCATACTGCCAATTGCATCGAAAAAATATCAAGCAAGAATTACAC
AATAGCCCTTTTGAAGTATTAGATAGTGAGGTGCTTGGGCTTAAGTGGAGAGCGCATCCCCTAGCCTTAGCGATTGCCCT
AGTTTCATTAGAAAGTTTAGATTTCAGAAATCAGTGTCGAACAGACAATGCATGCTTAACTCAAAACGCTCTCAAAGACT
TTTCATTTATCTCTTTTCCCCTTCTTAAAACAGAAGCTAAAGTCGGAGGCTTCTATGGAGGATTAAAAGTCATTTACAAT
CCTTCTCAATTAAATAATCTACCTTTTTCTACATTTATCCAAAGTTTAATCGAAGAAGGGGTGCCTATTATCAGTGTTGG
GGTCGGTTCTTGTGAATACCGACGCACGCTTGCTCATACTGGATTTGATTTATGGGGAGAAGGAAGAGGGCCTTTAGGTC
CTGCTTGGCAAGGATTAGAACCTTATCGACAGCTTGATAAGAAAAATTTTCCTATCGCAGAAGAAATGGATCAGCGAGTT
TTTACGTTACCAAGTTTTATTCATGTCGAAAATGAATATTATGATTCTTTAAAAAGAGCATTTGAAAAAATACACTCTTA
TTATCAAAAGATCATATGA

Upstream 100 bases:

>100_bases
TACAAGAGAATGTCCAGAATGTTTAATGACTATACCAATTCAAGCTAAAAATGTGGACATTGCACTCTAGACCTCGCTCA
AAAAAAAGATTATTTAACTC

Downstream 100 bases:

>100_bases
TTACTTTCATTCAAGACTATATAGATTCTTCTATTCCAAAAGCAAAAGCTTGTATTATTGGAGCAGGAGCAGCTGGGATT
GAAATAGCTACTCAGCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: L-glutamine:DOI aminotransferase [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MYSTELAILGGPKAFKKAFEEKWQRPKDKEKKLINTLIDRDELSGSGFGISLDFEQAFASYIGCQYCLSFSHGTAALMAA
YFAAGIGPGDEVLTPAVGYIASYSGAIHMGARPIFCDIDPSSLLINPQEIQKKISLRTKAINITDLNGRICDLDKILSLA
NHKGIPVVEDASHAHGGYWNKKKIGNFSHATCFSLQGVNPMGKAVAGGEGGVVCTNDQDIYQAMLAYCQLHRKNIKQELH
NSPFEVLDSEVLGLKWRAHPLALAIALVSLESLDFRNQCRTDNACLTQNALKDFSFISFPLLKTEAKVGGFYGGLKVIYN
PSQLNNLPFSTFIQSLIEEGVPIISVGVGSCEYRRTLAHTGFDLWGEGRGPLGPAWQGLEPYRQLDKKNFPIAEEMDQRV
FTLPSFIHVENEYYDSLKRAFEKIHSYYQKII

Sequences:

>Translated_432_residues
MYSTELAILGGPKAFKKAFEEKWQRPKDKEKKLINTLIDRDELSGSGFGISLDFEQAFASYIGCQYCLSFSHGTAALMAA
YFAAGIGPGDEVLTPAVGYIASYSGAIHMGARPIFCDIDPSSLLINPQEIQKKISLRTKAINITDLNGRICDLDKILSLA
NHKGIPVVEDASHAHGGYWNKKKIGNFSHATCFSLQGVNPMGKAVAGGEGGVVCTNDQDIYQAMLAYCQLHRKNIKQELH
NSPFEVLDSEVLGLKWRAHPLALAIALVSLESLDFRNQCRTDNACLTQNALKDFSFISFPLLKTEAKVGGFYGGLKVIYN
PSQLNNLPFSTFIQSLIEEGVPIISVGVGSCEYRRTLAHTGFDLWGEGRGPLGPAWQGLEPYRQLDKKNFPIAEEMDQRV
FTLPSFIHVENEYYDSLKRAFEKIHSYYQKII
>Mature_432_residues
MYSTELAILGGPKAFKKAFEEKWQRPKDKEKKLINTLIDRDELSGSGFGISLDFEQAFASYIGCQYCLSFSHGTAALMAA
YFAAGIGPGDEVLTPAVGYIASYSGAIHMGARPIFCDIDPSSLLINPQEIQKKISLRTKAINITDLNGRICDLDKILSLA
NHKGIPVVEDASHAHGGYWNKKKIGNFSHATCFSLQGVNPMGKAVAGGEGGVVCTNDQDIYQAMLAYCQLHRKNIKQELH
NSPFEVLDSEVLGLKWRAHPLALAIALVSLESLDFRNQCRTDNACLTQNALKDFSFISFPLLKTEAKVGGFYGGLKVIYN
PSQLNNLPFSTFIQSLIEEGVPIISVGVGSCEYRRTLAHTGFDLWGEGRGPLGPAWQGLEPYRQLDKKNFPIAEEMDQRV
FTLPSFIHVENEYYDSLKRAFEKIHSYYQKII

Specific function: Catalyzes the PLP-dependent transamination of 2-deoxy- scyllo-inosose (DOI) to form 2-deoxy-scyllo-inosamine (DOIA) using L-glutamine as the amino donor [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. L-glutamine:2- deoxy-scyllo-inosose/scyllo-inosose aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=231, Percent_Identity=30.7359307359307, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI2367285, Length=246, Percent_Identity=26.8292682926829, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 47863; Mature: 47863

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTELAILGGPKAFKKAFEEKWQRPKDKEKKLINTLIDRDELSGSGFGISLDFEQAFAS
CCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
YIGCQYCLSFSHGTAALMAAYFAAGIGPGDEVLTPAVGYIASYSGAIHMGARPIFCDIDP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCC
SSLLINPQEIQKKISLRTKAINITDLNGRICDLDKILSLANHKGIPVVEDASHAHGGYWN
CCEEECHHHHHHHHHHHHEEEEEEECCCCEECHHHHHHHHCCCCCCEECCCCCCCCCCCC
KKKIGNFSHATCFSLQGVNPMGKAVAGGEGGVVCTNDQDIYQAMLAYCQLHRKNIKQELH
CCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHC
NSPFEVLDSEVLGLKWRAHPLALAIALVSLESLDFRNQCRTDNACLTQNALKDFSFISFP
CCCHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKTEAKVGGFYGGLKVIYNPSQLNNLPFSTFIQSLIEEGVPIISVGVGSCEYRRTLAHT
HHHHHHHHCCCCCCEEEEECHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
GFDLWGEGRGPLGPAWQGLEPYRQLDKKNFPIAEEMDQRVFTLPSFIHVENEYYDSLKRA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHEEECHHHHHHHHHH
FEKIHSYYQKII
HHHHHHHHHHHC
>Mature Secondary Structure
MYSTELAILGGPKAFKKAFEEKWQRPKDKEKKLINTLIDRDELSGSGFGISLDFEQAFAS
CCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
YIGCQYCLSFSHGTAALMAAYFAAGIGPGDEVLTPAVGYIASYSGAIHMGARPIFCDIDP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCC
SSLLINPQEIQKKISLRTKAINITDLNGRICDLDKILSLANHKGIPVVEDASHAHGGYWN
CCEEECHHHHHHHHHHHHEEEEEEECCCCEECHHHHHHHHCCCCCCEECCCCCCCCCCCC
KKKIGNFSHATCFSLQGVNPMGKAVAGGEGGVVCTNDQDIYQAMLAYCQLHRKNIKQELH
CCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHC
NSPFEVLDSEVLGLKWRAHPLALAIALVSLESLDFRNQCRTDNACLTQNALKDFSFISFP
CCCHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH
LLKTEAKVGGFYGGLKVIYNPSQLNNLPFSTFIQSLIEEGVPIISVGVGSCEYRRTLAHT
HHHHHHHHCCCCCCEEEEECHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
GFDLWGEGRGPLGPAWQGLEPYRQLDKKNFPIAEEMDQRVFTLPSFIHVENEYYDSLKRA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHEEECHHHHHHHHHH
FEKIHSYYQKII
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA