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The map label for this gene is 46446425

Identifier: 46446425

GI number: 46446425

Start: 970920

End: 972371

Strand: Reverse

Name: 46446425

Synonym: pc0791

Alternate gene names: NA

Gene position: 972371-970920 (Counterclockwise)

Preceding gene: 46446426

Following gene: 46446424

Centisome position: 40.27

GC content: 33.95

Gene sequence:

>1452_bases
ATGATTACTTTCATTCAAGACTATATAGATTCTTCTATTCCAAAAGCAAAAGCTTGTATTATTGGAGCAGGAGCAGCTGG
GATTGAAATAGCTACTCAGCTAGCTTCTTCATTTGGCTCCATTTTGCTTTTAGAAGCAGGTTTAGAAGAGTTTGATTTCG
AAACACAAAAATTAACTTATTTTAAGCAGCAAGGAAAAAAAATTAGGTCCTTAGACCCACAAAATCCTTTTACTTTTGAA
ATGAGTAAAAAAGGTCAAACGCATTTAAAGCAGTATGGGGGGACATTAAATATTTGGGGAGGAAAATGGAAAACTCTTGA
TCCAATTGATTTTGAATCGAGGTTTGACTTGTCAGAAACAGCTTGGCCCATCACTTATCAAGATTTATATTCTTATTATG
CTTCTATCGCGCAAGATTATCAAATATTAGATCTTACTTGGGCTAATGCTCATAACGCTGACCTCCCCTTTACAATTTCT
CAATTACCTGGTTTTTCTCCGAGCTTAGATTTACTAGAAAAACATCCAACAAATAGTAAACATAAATTTCAAAAACAGCT
CGCGTCCTCTTCAATCCAAGTAATTTTAGGAGCTCATGTTGTTAATATTGCGCTTTCAGAGAATTTAGATTCGGTTAAAC
ATCTACATGTACGCTCCTTACGAGGACAGGATTGGCACGTTGAAGCACAATTTTACATTTTAGCGGCCGGATCAATAGAA
AATGCCAAACTTCTTCTTAATTCTCGTTCTCAGTTAAAAAAAGGTGTAGGTAACCATAGTGATTGGGTAGGAAGAAATTT
GCTCGACCATCCTAAAGGTTTTGGAGGATTACTTTTTCCTTATGATCAAAATGACATTATTGAAGGTCGTACTTTTTCTG
ACAAAAATAAAACTTTAGAAATAGGTATCTCTTTAAATCAGGAATTACTTAAAAAAGAGCGATTACCCAATCATTGTATA
AACATCTTTCCTCGTATTGACCAAAATCAAATAGTTTATGCTACCAAATTTTATCTCGAACAGCTTCCAAATGCAAATAG
CCATCTATTTTTAACAAATGAAAAAGATGCATTGAATCAGAATATTGTTTCTTTAGATTGGAAGTTTAGAAAAGAAGATT
TAATTTGCTTTGAAAATTATCTCAAGATTTTTGCTAATCTTTTAAAAAAGCACCAAGTCGGAGAACTAAATATGAAAGCT
GATGCTTTAACAATGGAAATTTTTAGAGATGCAAGTCACCAACTGGGAACGACTCGAATGGCTTTAAAAGCTCAAGATGG
AGTTGTTGACTCAAATTGTCAAGTTTTTGGAGTAAATAATTTATTTATTGCTGGAAGTTCCATTTTTCCCACTGCCGGAC
ATGCCAATCCGACATTGACAATCTTAGCCTTAGCTCGCAGACTTGCTGATCATTTAAAGCGAACTTATGGCAATATTTTT
TTTAATTCTTGA

Upstream 100 bases:

>100_bases
GAGTTTTTACGTTACCAAGTTTTATTCATGTCGAAAATGAATATTATGATTCTTTAAAAAGAGCATTTGAAAAAATACAC
TCTTATTATCAAAAGATCAT

Downstream 100 bases:

>100_bases
TAAATGATATAATAAAGAGAAAAAAATTAAAAATTCCTTCATTGGAGGTTTATGAAAAATGTTTACCACATCATTTTTAT
GGGGATAATGGGATTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; NAD-Dependent Epimerase/Dehydratase; Choline Dehydrogenase-Like Flavoprotein; GMC Oxidoreductase Family; Choline Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Dehydrogenase Subunit I; GMC Family Oxidoreductase; Gluconate Dehydrogenase Subunit; Capsular Polysaccharide Biosynthesis Oxidoreductase; Oxidoreductase-Like Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MITFIQDYIDSSIPKAKACIIGAGAAGIEIATQLASSFGSILLLEAGLEEFDFETQKLTYFKQQGKKIRSLDPQNPFTFE
MSKKGQTHLKQYGGTLNIWGGKWKTLDPIDFESRFDLSETAWPITYQDLYSYYASIAQDYQILDLTWANAHNADLPFTIS
QLPGFSPSLDLLEKHPTNSKHKFQKQLASSSIQVILGAHVVNIALSENLDSVKHLHVRSLRGQDWHVEAQFYILAAGSIE
NAKLLLNSRSQLKKGVGNHSDWVGRNLLDHPKGFGGLLFPYDQNDIIEGRTFSDKNKTLEIGISLNQELLKKERLPNHCI
NIFPRIDQNQIVYATKFYLEQLPNANSHLFLTNEKDALNQNIVSLDWKFRKEDLICFENYLKIFANLLKKHQVGELNMKA
DALTMEIFRDASHQLGTTRMALKAQDGVVDSNCQVFGVNNLFIAGSSIFPTAGHANPTLTILALARRLADHLKRTYGNIF
FNS

Sequences:

>Translated_483_residues
MITFIQDYIDSSIPKAKACIIGAGAAGIEIATQLASSFGSILLLEAGLEEFDFETQKLTYFKQQGKKIRSLDPQNPFTFE
MSKKGQTHLKQYGGTLNIWGGKWKTLDPIDFESRFDLSETAWPITYQDLYSYYASIAQDYQILDLTWANAHNADLPFTIS
QLPGFSPSLDLLEKHPTNSKHKFQKQLASSSIQVILGAHVVNIALSENLDSVKHLHVRSLRGQDWHVEAQFYILAAGSIE
NAKLLLNSRSQLKKGVGNHSDWVGRNLLDHPKGFGGLLFPYDQNDIIEGRTFSDKNKTLEIGISLNQELLKKERLPNHCI
NIFPRIDQNQIVYATKFYLEQLPNANSHLFLTNEKDALNQNIVSLDWKFRKEDLICFENYLKIFANLLKKHQVGELNMKA
DALTMEIFRDASHQLGTTRMALKAQDGVVDSNCQVFGVNNLFIAGSSIFPTAGHANPTLTILALARRLADHLKRTYGNIF
FNS
>Mature_483_residues
MITFIQDYIDSSIPKAKACIIGAGAAGIEIATQLASSFGSILLLEAGLEEFDFETQKLTYFKQQGKKIRSLDPQNPFTFE
MSKKGQTHLKQYGGTLNIWGGKWKTLDPIDFESRFDLSETAWPITYQDLYSYYASIAQDYQILDLTWANAHNADLPFTIS
QLPGFSPSLDLLEKHPTNSKHKFQKQLASSSIQVILGAHVVNIALSENLDSVKHLHVRSLRGQDWHVEAQFYILAAGSIE
NAKLLLNSRSQLKKGVGNHSDWVGRNLLDHPKGFGGLLFPYDQNDIIEGRTFSDKNKTLEIGISLNQELLKKERLPNHCI
NIFPRIDQNQIVYATKFYLEQLPNANSHLFLTNEKDALNQNIVSLDWKFRKEDLICFENYLKIFANLLKKHQVGELNMKA
DALTMEIFRDASHQLGTTRMALKAQDGVVDSNCQVFGVNNLFIAGSSIFPTAGHANPTLTILALARRLADHLKRTYGNIF
FNS

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54441; Mature: 54441

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFIQDYIDSSIPKAKACIIGAGAAGIEIATQLASSFGSILLLEAGLEEFDFETQKLTY
CCEEHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHHHH
FKQQGKKIRSLDPQNPFTFEMSKKGQTHLKQYGGTLNIWGGKWKTLDPIDFESRFDLSET
HHHHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
AWPITYQDLYSYYASIAQDYQILDLTWANAHNADLPFTISQLPGFSPSLDLLEKHPTNSK
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHCCCCCCCHHHHHCCCCCHH
HKFQKQLASSSIQVILGAHVVNIALSENLDSVKHLHVRSLRGQDWHVEAQFYILAAGSIE
HHHHHHHHHCCCEEEEEHHEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC
NAKLLLNSRSQLKKGVGNHSDWVGRNLLDHPKGFGGLLFPYDQNDIIEGRTFSDKNKTLE
CHHEEECCHHHHHHCCCCCCHHHHCCHHHCCCCCCCEEEECCCCCCCCCCEECCCCCEEE
IGISLNQELLKKERLPNHCINIFPRIDQNQIVYATKFYLEQLPNANSHLFLTNEKDALNQ
EEECCCHHHHHHHCCCHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCHHHHCC
NIVSLDWKFRKEDLICFENYLKIFANLLKKHQVGELNMKADALTMEIFRDASHQLGTTRM
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
ALKAQDGVVDSNCQVFGVNNLFIAGSSIFPTAGHANPTLTILALARRLADHLKRTYGNIF
EEEECCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
FNS
ECC
>Mature Secondary Structure
MITFIQDYIDSSIPKAKACIIGAGAAGIEIATQLASSFGSILLLEAGLEEFDFETQKLTY
CCEEHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHHHH
FKQQGKKIRSLDPQNPFTFEMSKKGQTHLKQYGGTLNIWGGKWKTLDPIDFESRFDLSET
HHHHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
AWPITYQDLYSYYASIAQDYQILDLTWANAHNADLPFTISQLPGFSPSLDLLEKHPTNSK
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHCCCCCCCHHHHHCCCCCHH
HKFQKQLASSSIQVILGAHVVNIALSENLDSVKHLHVRSLRGQDWHVEAQFYILAAGSIE
HHHHHHHHHCCCEEEEEHHEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC
NAKLLLNSRSQLKKGVGNHSDWVGRNLLDHPKGFGGLLFPYDQNDIIEGRTFSDKNKTLE
CHHEEECCHHHHHHCCCCCCHHHHCCHHHCCCCCCCEEEECCCCCCCCCCEECCCCCEEE
IGISLNQELLKKERLPNHCINIFPRIDQNQIVYATKFYLEQLPNANSHLFLTNEKDALNQ
EEECCCHHHHHHHCCCHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCHHHHCC
NIVSLDWKFRKEDLICFENYLKIFANLLKKHQVGELNMKADALTMEIFRDASHQLGTTRM
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
ALKAQDGVVDSNCQVFGVNNLFIAGSSIFPTAGHANPTLTILALARRLADHLKRTYGNIF
EEEECCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
FNS
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA