Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ybeT [C]

Identifier: 46446342

GI number: 46446342

Start: 860165

End: 860641

Strand: Reverse

Name: ybeT [C]

Synonym: pc0708

Alternate gene names: 46446342

Gene position: 860641-860165 (Counterclockwise)

Preceding gene: 46446343

Following gene: 46446334

Centisome position: 35.65

GC content: 37.11

Gene sequence:

>477_bases
ATGCGATTAAAATTTATAGACGGTGATACTCCTATTAACTATTCTACTTTTTCTTCTAGCACAGATTCAAAACTCAGCCA
AAGTAAAATAATTAAGGGGAAAATGTATGTGCTTTTAGGAAGCTTTGAAAAAACACATCCTTTAATACGTAGAATTGGAA
TTGGAATACGTGCAGTTTGCAAAATTCTATTTTCTTTAGGATTCGGGCTTTATTCGGAAAGTGTTCGAGAAGATTGGAAG
TCTTTTTGGAATGGCAAAAAAAGTAAAGTTATTTACAGTTCCTCCCCAACTTTATCGATTAAACTTTTGGCAGATCGAGG
CAACGCAACTGCTCAGCATAAGCTCGGATTGATGTATGAACAGGGACAAGGTGTCCCGCAGTCTGATCAAGAAGCTATTA
AATATTACCAACTTGCTGCGGATCAAGGTAATGCAGACACTCGATATAACCTGGGACGTATGTATAAAAAGGGGTGA

Upstream 100 bases:

>100_bases
TCGTTAAATCAATTTTTAATTTTTATTTTATATTTATAATAAAAAATTGTAAATAATATATATACATATATTATTAATAA
TAAATTAAAAAGGAAATCAT

Downstream 100 bases:

>100_bases
GGTGTTCCACCATCTCACAAAAAAGCTTTTGAATGTTTTAAACTCGTGGCAGACCAAGGAGATCCATTCGCTCAATATTA
TGTCGGGGTGATGTATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK
SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG

Sequences:

>Translated_158_residues
MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK
SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG
>Mature_158_residues
MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK
SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17746; Mature: 17746

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVC
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCHHHHH
KILFSLGFGLYSESVREDWKSFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYE
HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCHHHCCEEEE
QGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVC
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCHHHHH
KILFSLGFGLYSESVREDWKSFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYE
HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCHHHCCEEEE
QGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA