| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is ybeT [C]
Identifier: 46446342
GI number: 46446342
Start: 860165
End: 860641
Strand: Reverse
Name: ybeT [C]
Synonym: pc0708
Alternate gene names: 46446342
Gene position: 860641-860165 (Counterclockwise)
Preceding gene: 46446343
Following gene: 46446334
Centisome position: 35.65
GC content: 37.11
Gene sequence:
>477_bases ATGCGATTAAAATTTATAGACGGTGATACTCCTATTAACTATTCTACTTTTTCTTCTAGCACAGATTCAAAACTCAGCCA AAGTAAAATAATTAAGGGGAAAATGTATGTGCTTTTAGGAAGCTTTGAAAAAACACATCCTTTAATACGTAGAATTGGAA TTGGAATACGTGCAGTTTGCAAAATTCTATTTTCTTTAGGATTCGGGCTTTATTCGGAAAGTGTTCGAGAAGATTGGAAG TCTTTTTGGAATGGCAAAAAAAGTAAAGTTATTTACAGTTCCTCCCCAACTTTATCGATTAAACTTTTGGCAGATCGAGG CAACGCAACTGCTCAGCATAAGCTCGGATTGATGTATGAACAGGGACAAGGTGTCCCGCAGTCTGATCAAGAAGCTATTA AATATTACCAACTTGCTGCGGATCAAGGTAATGCAGACACTCGATATAACCTGGGACGTATGTATAAAAAGGGGTGA
Upstream 100 bases:
>100_bases TCGTTAAATCAATTTTTAATTTTTATTTTATATTTATAATAAAAAATTGTAAATAATATATATACATATATTATTAATAA TAAATTAAAAAGGAAATCAT
Downstream 100 bases:
>100_bases GGTGTTCCACCATCTCACAAAAAAGCTTTTGAATGTTTTAAACTCGTGGCAGACCAAGGAGATCCATTCGCTCAATATTA TGTCGGGGTGATGTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG
Sequences:
>Translated_158_residues MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG >Mature_158_residues MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVCKILFSLGFGLYSESVREDWK SFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYEQGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17746; Mature: 17746
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVC CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCHHHHH KILFSLGFGLYSESVREDWKSFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYE HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCHHHCCEEEE QGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MRLKFIDGDTPINYSTFSSSTDSKLSQSKIIKGKMYVLLGSFEKTHPLIRRIGIGIRAVC CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCHHHHH KILFSLGFGLYSESVREDWKSFWNGKKSKVIYSSSPTLSIKLLADRGNATAQHKLGLMYE HHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCHHHCCEEEE QGQGVPQSDQEAIKYYQLAADQGNADTRYNLGRMYKKG CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA