Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446262

Identifier: 46446262

GI number: 46446262

Start: 767989

End: 768606

Strand: Reverse

Name: 46446262

Synonym: pc0628

Alternate gene names: NA

Gene position: 768606-767989 (Counterclockwise)

Preceding gene: 46446264

Following gene: 46446258

Centisome position: 31.83

GC content: 31.07

Gene sequence:

>618_bases
ATGAGTTCGAACATTGAACTTGTCGCAGACGGTATTTTATTTAGTAATTTCTATTTAAACTCTATCTTCTTAAAGGAAAT
TATCAAAAATTGTGCAAGCATTTTAACTTGTACTTTTGGAATACTTGAGATTTGTAATCTTTATCAAATCTCAAAAGGCC
GACATTTATTAAATGCTTTATTTTCTACTAATATAGGAATATCTAAAATTCACATTTTCAGTATCATTTGCAGTAAAATT
TCTCTTATTTTGAGTGCTGTAGCCTCTCGTCCGGGATTCGCTTTGATTACGGAAGTTTCCTATTATTTTTTTTCTCCTCT
TCAAATGGAAGTTTACTTTGGTCCTAATACAATTTTTGAAGTTAATCCTTGGCACCCTCGCCATGTGATTAGCATTTTAG
CTGTTTGCTTTGCTTGTCCTATCCTTCTTCAACTTTTCTATCAATCTTTTCGTCGGATTAATCTATTCATTAATAAATAT
TTTCAATGTCAAATGACAGAAACCTCTTCAACGAGAAGATTGACTGATGCAAAAGAAACTTTCATTTGGTTTTTTAATTT
TTTAGCCAGCAGACCTATTTTGCATATCGGTAACCAATGTGCACAATTTCTTTTATAA

Upstream 100 bases:

>100_bases
GTTAGAGTTTGTTGCAGTTTATGTAGAAATAAGTATAATATTTCTTTTTTTATCCGCTATTCATTATTTTTGAACTGACA
TGCACTAAACGGAAATAATT

Downstream 100 bases:

>100_bases
TACAAAAAATTTTCGTTGATAAAATCAACGTTTCTTATACAAATTTTATAGTTGTTAAGAGCTAAAAAATGTTTCTTTAG
ACAGAAAACAGATAGATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSSNIELVADGILFSNFYLNSIFLKEIIKNCASILTCTFGILEICNLYQISKGRHLLNALFSTNIGISKIHIFSIICSKI
SLILSAVASRPGFALITEVSYYFFSPLQMEVYFGPNTIFEVNPWHPRHVISILAVCFACPILLQLFYQSFRRINLFINKY
FQCQMTETSSTRRLTDAKETFIWFFNFLASRPILHIGNQCAQFLL

Sequences:

>Translated_205_residues
MSSNIELVADGILFSNFYLNSIFLKEIIKNCASILTCTFGILEICNLYQISKGRHLLNALFSTNIGISKIHIFSIICSKI
SLILSAVASRPGFALITEVSYYFFSPLQMEVYFGPNTIFEVNPWHPRHVISILAVCFACPILLQLFYQSFRRINLFINKY
FQCQMTETSSTRRLTDAKETFIWFFNFLASRPILHIGNQCAQFLL
>Mature_204_residues
SSNIELVADGILFSNFYLNSIFLKEIIKNCASILTCTFGILEICNLYQISKGRHLLNALFSTNIGISKIHIFSIICSKIS
LILSAVASRPGFALITEVSYYFFSPLQMEVYFGPNTIFEVNPWHPRHVISILAVCFACPILLQLFYQSFRRINLFINKYF
QCQMTETSSTRRLTDAKETFIWFFNFLASRPILHIGNQCAQFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23525; Mature: 23394

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNIELVADGILFSNFYLNSIFLKEIIKNCASILTCTFGILEICNLYQISKGRHLLNAL
CCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FSTNIGISKIHIFSIICSKISLILSAVASRPGFALITEVSYYFFSPLQMEVYFGPNTIFE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCEEEEEEECCCEEEE
VNPWHPRHVISILAVCFACPILLQLFYQSFRRINLFINKYFQCQMTETSSTRRLTDAKET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH
FIWFFNFLASRPILHIGNQCAQFLL
HHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SSNIELVADGILFSNFYLNSIFLKEIIKNCASILTCTFGILEICNLYQISKGRHLLNAL
CCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FSTNIGISKIHIFSIICSKISLILSAVASRPGFALITEVSYYFFSPLQMEVYFGPNTIFE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCEEEEEEECCCEEEE
VNPWHPRHVISILAVCFACPILLQLFYQSFRRINLFINKYFQCQMTETSSTRRLTDAKET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHH
FIWFFNFLASRPILHIGNQCAQFLL
HHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA