| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446131
Identifier: 46446131
GI number: 46446131
Start: 637095
End: 637832
Strand: Reverse
Name: 46446131
Synonym: pc0497
Alternate gene names: NA
Gene position: 637832-637095 (Counterclockwise)
Preceding gene: 46446133
Following gene: 46446130
Centisome position: 26.42
GC content: 36.86
Gene sequence:
>738_bases ATGCTTCACAAAATCTTTTTAACGCTAATCTGCTTATTGATAAGCTGGAAGCCGATTTTAGCTAGCGAAATTTTACAGTT ACGCAAAAATTTACAAAGAGCGGTGCCTGGAGACTATCTTGTTATTTCTTCAAATAAAACTGATACACTCATGCATATCT ACGATAAACAAGATGATATTCTTACCATCGAAGAGATTGCGATTCCCGATTGTCGTAAACCTAAGCAATTAAGCTGGAAA AAATGGGTAGAACAATATGCTCCAGGAAATACTTCTTGGGTGATGTATGAAATTAATTTGCAAACTGGACGTATGATTCG TTACTACTCTTTTTCTAAAAATGATTGGTACGCGATTTCTGATGCTGATAATTTTTTATCGACTCTTCTCAATTTGAAAT TATCTCCTATTCCTCAAGAAGCCCGTAAAAAAATCGGACCCAAGCCTAATTCTGGGCCGGATTGGAGACCTGTATGGCAA CCTCGTATGATTGTCAATGGTTCGATCATTAAAGATGTTCGCTTTAATGCTTGGCGTACCAGATGGCCTAAAGATGGAAG TGAGCTATCAGGCAAAATAATCGAAATTTATTTACCTGTAGATAATCAGCAGTATCCTTCTTATTTCCCTTACTGGCTTC AAGTCAATGGAGTGATTGGTAAAGCTAAAATTAGAATAATTGATTCTGGTACGCAGCTCATATCTCCAAAATCACCTCTT CCTGCTTTAAATCCTTGA
Upstream 100 bases:
>100_bases CTAGTATACTATATTGCTTTATTGTTTTATTGCTGGTAATTTATCATAAATCAAATCTTTTATTAAAATAAAAGCTTTCA GGCATAGATGGAGAATAAAA
Downstream 100 bases:
>100_bases CCAGGGCGGTTAATTTGGCGTATACTTATCAACAATTTTTTCATCGAAAAAAATATTTCTCAGCTTTTGGAATCTGTTCA CTAACAAACTTTCGTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL PALNP
Sequences:
>Translated_245_residues MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL PALNP >Mature_245_residues MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL PALNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28371; Mature: 28371
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCE LTIEEIAIPDCRKPKQLSWKKWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAIS EEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCEEEEC DADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQPRMIVNGSIIKDVRFNAWRT CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHC RWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEECCCCCC PALNP CCCCC >Mature Secondary Structure MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCE LTIEEIAIPDCRKPKQLSWKKWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAIS EEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCEEEEC DADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQPRMIVNGSIIKDVRFNAWRT CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHC RWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEECCCCCC PALNP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA