Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446131

Identifier: 46446131

GI number: 46446131

Start: 637095

End: 637832

Strand: Reverse

Name: 46446131

Synonym: pc0497

Alternate gene names: NA

Gene position: 637832-637095 (Counterclockwise)

Preceding gene: 46446133

Following gene: 46446130

Centisome position: 26.42

GC content: 36.86

Gene sequence:

>738_bases
ATGCTTCACAAAATCTTTTTAACGCTAATCTGCTTATTGATAAGCTGGAAGCCGATTTTAGCTAGCGAAATTTTACAGTT
ACGCAAAAATTTACAAAGAGCGGTGCCTGGAGACTATCTTGTTATTTCTTCAAATAAAACTGATACACTCATGCATATCT
ACGATAAACAAGATGATATTCTTACCATCGAAGAGATTGCGATTCCCGATTGTCGTAAACCTAAGCAATTAAGCTGGAAA
AAATGGGTAGAACAATATGCTCCAGGAAATACTTCTTGGGTGATGTATGAAATTAATTTGCAAACTGGACGTATGATTCG
TTACTACTCTTTTTCTAAAAATGATTGGTACGCGATTTCTGATGCTGATAATTTTTTATCGACTCTTCTCAATTTGAAAT
TATCTCCTATTCCTCAAGAAGCCCGTAAAAAAATCGGACCCAAGCCTAATTCTGGGCCGGATTGGAGACCTGTATGGCAA
CCTCGTATGATTGTCAATGGTTCGATCATTAAAGATGTTCGCTTTAATGCTTGGCGTACCAGATGGCCTAAAGATGGAAG
TGAGCTATCAGGCAAAATAATCGAAATTTATTTACCTGTAGATAATCAGCAGTATCCTTCTTATTTCCCTTACTGGCTTC
AAGTCAATGGAGTGATTGGTAAAGCTAAAATTAGAATAATTGATTCTGGTACGCAGCTCATATCTCCAAAATCACCTCTT
CCTGCTTTAAATCCTTGA

Upstream 100 bases:

>100_bases
CTAGTATACTATATTGCTTTATTGTTTTATTGCTGGTAATTTATCATAAATCAAATCTTTTATTAAAATAAAAGCTTTCA
GGCATAGATGGAGAATAAAA

Downstream 100 bases:

>100_bases
CCAGGGCGGTTAATTTGGCGTATACTTATCAACAATTTTTTCATCGAAAAAAATATTTCTCAGCTTTTGGAATCTGTTCA
CTAACAAACTTTCGTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK
KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ
PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL
PALNP

Sequences:

>Translated_245_residues
MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK
KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ
PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL
PALNP
>Mature_245_residues
MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDILTIEEIAIPDCRKPKQLSWK
KWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAISDADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQ
PRMIVNGSIIKDVRFNAWRTRWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL
PALNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28371; Mature: 28371

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDI
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCE
LTIEEIAIPDCRKPKQLSWKKWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAIS
EEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCEEEEC
DADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQPRMIVNGSIIKDVRFNAWRT
CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHC
RWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEECCCCCC
PALNP
CCCCC
>Mature Secondary Structure
MLHKIFLTLICLLISWKPILASEILQLRKNLQRAVPGDYLVISSNKTDTLMHIYDKQDDI
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCE
LTIEEIAIPDCRKPKQLSWKKWVEQYAPGNTSWVMYEINLQTGRMIRYYSFSKNDWYAIS
EEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCEEEEC
DADNFLSTLLNLKLSPIPQEARKKIGPKPNSGPDWRPVWQPRMIVNGSIIKDVRFNAWRT
CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHC
RWPKDGSELSGKIIEIYLPVDNQQYPSYFPYWLQVNGVIGKAKIRIIDSGTQLISPKSPL
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEECCCEEECCCCCC
PALNP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA