Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446027

Identifier: 46446027

GI number: 46446027

Start: 526096

End: 526593

Strand: Reverse

Name: 46446027

Synonym: pc0393

Alternate gene names: NA

Gene position: 526593-526096 (Counterclockwise)

Preceding gene: 161611309

Following gene: 46446020

Centisome position: 21.81

GC content: 29.52

Gene sequence:

>498_bases
TTGAATGAAATTAGCCAATACGTTTTTATTCCAAAGGAAGAGATAAGAGAGCTATATATGCACAATTTAGCAATGATCGA
AGAATATTATAAAAAATTTAGTAAGAATCTTTCTTATTGGATTCCTGATGGAATTTTTTACGTTAACCTTGATCTCCTTC
ATCATTTTGATTTATTACATTTTCAGCCCTTGACAAAAAAGAAAGCTCAATTGATCCCTCGTTATTTTCATATCATTGAA
TCGACAGATAAAATTACCTTAGTTAACGATGATTATATCGTATGGATTGTTCCTGATCAGCTAGATGATTTACCCGTCAC
TTATACATTAATTGCTTTAAATAAGCCTGAAGAAGATGTTCACTTAGAAGCTACTTTTATAGCGTCCGGAATTTATAACA
ATTCTAAAATTGTTTTAAAAATATTAGAAAGTTTTTTGGCAGAAATTCAAGACAATGAACAGCAACTATCTCAACTAAAA
GACTCTTACAATCTATGA

Upstream 100 bases:

>100_bases
AAAAAAACAACTAAAAAATTGAAAATCAATTAAAAAATAAATTAAAATTATTATGTAAGATTAGTATTTTCAGACCTCTA
GAAGTGAATGAATTTACTAA

Downstream 100 bases:

>100_bases
TTTTAAATGCATTTTCTAAGTTTTAAATTATTGTTCAGGATCCATAATGTATTTAATCAAAGAAAGGATATTGCCCTCCT
TACCTCTTTGATATTCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNEISQYVFIPKEEIRELYMHNLAMIEEYYKKFSKNLSYWIPDGIFYVNLDLLHHFDLLHFQPLTKKKAQLIPRYFHIIE
STDKITLVNDDYIVWIVPDQLDDLPVTYTLIALNKPEEDVHLEATFIASGIYNNSKIVLKILESFLAEIQDNEQQLSQLK
DSYNL

Sequences:

>Translated_165_residues
MNEISQYVFIPKEEIRELYMHNLAMIEEYYKKFSKNLSYWIPDGIFYVNLDLLHHFDLLHFQPLTKKKAQLIPRYFHIIE
STDKITLVNDDYIVWIVPDQLDDLPVTYTLIALNKPEEDVHLEATFIASGIYNNSKIVLKILESFLAEIQDNEQQLSQLK
DSYNL
>Mature_165_residues
MNEISQYVFIPKEEIRELYMHNLAMIEEYYKKFSKNLSYWIPDGIFYVNLDLLHHFDLLHFQPLTKKKAQLIPRYFHIIE
STDKITLVNDDYIVWIVPDQLDDLPVTYTLIALNKPEEDVHLEATFIASGIYNNSKIVLKILESFLAEIQDNEQQLSQLK
DSYNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19586; Mature: 19586

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEISQYVFIPKEEIRELYMHNLAMIEEYYKKFSKNLSYWIPDGIFYVNLDLLHHFDLLH
CCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEHHHHHHHHHHH
FQPLTKKKAQLIPRYFHIIESTDKITLVNDDYIVWIVPDQLDDLPVTYTLIALNKPEEDV
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEECCCCCHH
HLEATFIASGIYNNSKIVLKILESFLAEIQDNEQQLSQLKDSYNL
EEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNEISQYVFIPKEEIRELYMHNLAMIEEYYKKFSKNLSYWIPDGIFYVNLDLLHHFDLLH
CCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEHHHHHHHHHHH
FQPLTKKKAQLIPRYFHIIESTDKITLVNDDYIVWIVPDQLDDLPVTYTLIALNKPEEDV
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEECCCCCHH
HLEATFIASGIYNNSKIVLKILESFLAEIQDNEQQLSQLKDSYNL
EEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA