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The map label for this gene is 46445991

Identifier: 46445991

GI number: 46445991

Start: 483551

End: 483799

Strand: Direct

Name: 46445991

Synonym: pc0357

Alternate gene names: NA

Gene position: 483551-483799 (Clockwise)

Preceding gene: 46445990

Following gene: 46445995

Centisome position: 20.03

GC content: 34.14

Gene sequence:

>249_bases
ATGAAAGAATTTGTAGCATATATAGTTAAGAATTTGGTCGATCATCCAGACAAGGTAAAGATTAATGAAATCGGCGGTAC
ACAAACACTGATTATCGAATTATCAGTCGAAAAGTCTGATATTGGAAAAATTATAGGGAAAAAAGGTAAGACCATTAATG
CGATCCGTACTCTATTGATGTCTGTTGCAAGTCGCAATGGTATTCGCGTTAATTTGGAAATCTTAGAAGAAAATTCTAGA
CCCGAATAA

Upstream 100 bases:

>100_bases
TTATAGAATAATTCGCTATTGTCAAATTAAGAGACAATTATGTTTTATTGCATACGACGTCGAATGTTATCAACGTTTCA
TATTTGCAAAGGATCGAATT

Downstream 100 bases:

>100_bases
TTTCTATTTAAGGATGTAAGAAATAAGTTTGCTTATTTCTTATGCTATTTGTCAGAAATAGTCTTACTGTATTAATTACA
GCTATATTTCTGACAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKEFVAYIVKNLVDHPDKVKINEIGGTQTLIIELSVEKSDIGKIIGKKGKTINAIRTLLMSVASRNGIRVNLEILEENSR
PE

Sequences:

>Translated_82_residues
MKEFVAYIVKNLVDHPDKVKINEIGGTQTLIIELSVEKSDIGKIIGKKGKTINAIRTLLMSVASRNGIRVNLEILEENSR
PE
>Mature_82_residues
MKEFVAYIVKNLVDHPDKVKINEIGGTQTLIIELSVEKSDIGKIIGKKGKTINAIRTLLMSVASRNGIRVNLEILEENSR
PE

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 9131; Mature: 9131

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFVAYIVKNLVDHPDKVKINEIGGTQTLIIELSVEKSDIGKIIGKKGKTINAIRTLLM
CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHH
SVASRNGIRVNLEILEENSRPE
HHHCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKEFVAYIVKNLVDHPDKVKINEIGGTQTLIIELSVEKSDIGKIIGKKGKTINAIRTLLM
CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHH
SVASRNGIRVNLEILEENSRPE
HHHCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]