| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is ykuE [C]
Identifier: 46445960
GI number: 46445960
Start: 446484
End: 447449
Strand: Direct
Name: ykuE [C]
Synonym: pc0326
Alternate gene names: 46445960
Gene position: 446484-447449 (Clockwise)
Preceding gene: 46445959
Following gene: 46445961
Centisome position: 18.49
GC content: 35.3
Gene sequence:
>966_bases ATGAATACTAAAAAGACATGGAGTGAATGGCTTTGGGATTTCTGGTGTATCGTGTCTATTATAGGAATTTGGCCTCGCTT TATTGAACCACAATTATTAGGTGTTTCAAAGTTGACATTGCCTATTGCTAATCTTCCTTCGTCTTTAAGTGGGCTGACTA TTCTTCAATTTAGTGATCTACACTGGAACAACTTATTTTCAAAAAGATTAGAAAAAAAGTTAATTAATAAAATTAAACGA TTGAAACCCGATATTATTGTTTTTACGGGAGACTGGATATGCCGTTCAAAAATCGAAAAGAAAGAACAATTAAAATTTTT TTTAAATCAATTACAGGCTCCCCTGGGTTGCTTTACCATTTTTGGTAATCATGATTATGACCGCTTTGTGACCATAAATG AAAAAGGGGATTATGATGTGGAATATCCTTCCTCTTCTTCAAATATCGGAAAAGGGTTTGGACGTTTATTGAGTTCTATT CGCTTAACAGGAAAGGTGACTGACGCTGCAAAATCAACCCTAATTCATGCAGAGCTTTGCGAACTGCTGAAAGAAACTCC TTTTCAAATGCTCGATAATGAAACAATAACTATTTCTCACAAGAATAAGCAATTGAATATTTGTGGTCTCGGCGAGTATT CTTTGGGTCGCTTTGATCCTGAAAAAGCTTTTCGGAAATACAATAAGGCGTATCCAGGTGTTATCCTTTCTCATCATCCA GATACAATTGAAATCCTTAAAAAATATCCCGGAGATCTTATATTAGTAGGCCATACGCATGGAGGTCAGGTTAACCTTCC ATTTTTTTGGAGTAAATTTACTCAACTTGAGAACAAAAAATATAAGCGAGGGCTTAAAATCGTGGATAAAAAATGGGCTT ACATCAATCGTGGAATTGGTAGTGTTATCCATTTTCGTTGGTTTGCTACGCCTGAGTTGACTTTGATGACTTTAAAACAA GGATAA
Upstream 100 bases:
>100_bases TTAGTCTACCTTTTATTTATTTTCCATTCCCCGCTATAATAGCGAAATTTCAATTAGGCAAAATCATAGAATAATTTTAA GCGATGTTTATGGAATGGTT
Downstream 100 bases:
>100_bases GATGGAACATCAACTAATTCCTTTTACAGTTGTTCTTTTAGCTGGTGGAATGGGAACCAGAATGAAAAATCTTATTCCCA AACAATATCTAACTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNTKKTWSEWLWDFWCIVSIIGIWPRFIEPQLLGVSKLTLPIANLPSSLSGLTILQFSDLHWNNLFSKRLEKKLINKIKR LKPDIIVFTGDWICRSKIEKKEQLKFFLNQLQAPLGCFTIFGNHDYDRFVTINEKGDYDVEYPSSSSNIGKGFGRLLSSI RLTGKVTDAAKSTLIHAELCELLKETPFQMLDNETITISHKNKQLNICGLGEYSLGRFDPEKAFRKYNKAYPGVILSHHP DTIEILKKYPGDLILVGHTHGGQVNLPFFWSKFTQLENKKYKRGLKIVDKKWAYINRGIGSVIHFRWFATPELTLMTLKQ G
Sequences:
>Translated_321_residues MNTKKTWSEWLWDFWCIVSIIGIWPRFIEPQLLGVSKLTLPIANLPSSLSGLTILQFSDLHWNNLFSKRLEKKLINKIKR LKPDIIVFTGDWICRSKIEKKEQLKFFLNQLQAPLGCFTIFGNHDYDRFVTINEKGDYDVEYPSSSSNIGKGFGRLLSSI RLTGKVTDAAKSTLIHAELCELLKETPFQMLDNETITISHKNKQLNICGLGEYSLGRFDPEKAFRKYNKAYPGVILSHHP DTIEILKKYPGDLILVGHTHGGQVNLPFFWSKFTQLENKKYKRGLKIVDKKWAYINRGIGSVIHFRWFATPELTLMTLKQ G >Mature_321_residues MNTKKTWSEWLWDFWCIVSIIGIWPRFIEPQLLGVSKLTLPIANLPSSLSGLTILQFSDLHWNNLFSKRLEKKLINKIKR LKPDIIVFTGDWICRSKIEKKEQLKFFLNQLQAPLGCFTIFGNHDYDRFVTINEKGDYDVEYPSSSSNIGKGFGRLLSSI RLTGKVTDAAKSTLIHAELCELLKETPFQMLDNETITISHKNKQLNICGLGEYSLGRFDPEKAFRKYNKAYPGVILSHHP DTIEILKKYPGDLILVGHTHGGQVNLPFFWSKFTQLENKKYKRGLKIVDKKWAYINRGIGSVIHFRWFATPELTLMTLKQ G
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=265, Percent_Identity=26.7924528301887, Blast_Score=104, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 37024; Mature: 37024
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKTWSEWLWDFWCIVSIIGIWPRFIEPQLLGVSKLTLPIANLPSSLSGLTILQFSDL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHEEEHHCCCCCCCCEEEEEECCC HWNNLFSKRLEKKLINKIKRLKPDIIVFTGDWICRSKIEKKEQLKFFLNQLQAPLGCFTI CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE FGNHDYDRFVTINEKGDYDVEYPSSSSNIGKGFGRLLSSIRLTGKVTDAAKSTLIHAELC ECCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ELLKETPFQMLDNETITISHKNKQLNICGLGEYSLGRFDPEKAFRKYNKAYPGVILSHHP HHHHHCCHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCC DTIEILKKYPGDLILVGHTHGGQVNLPFFWSKFTQLENKKYKRGLKIVDKKWAYINRGIG CHHHHHHHCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC SVIHFRWFATPELTLMTLKQG CEEEEEEECCCCEEEEEECCC >Mature Secondary Structure MNTKKTWSEWLWDFWCIVSIIGIWPRFIEPQLLGVSKLTLPIANLPSSLSGLTILQFSDL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHEEEHHCCCCCCCCEEEEEECCC HWNNLFSKRLEKKLINKIKRLKPDIIVFTGDWICRSKIEKKEQLKFFLNQLQAPLGCFTI CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE FGNHDYDRFVTINEKGDYDVEYPSSSSNIGKGFGRLLSSIRLTGKVTDAAKSTLIHAELC ECCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ELLKETPFQMLDNETITISHKNKQLNICGLGEYSLGRFDPEKAFRKYNKAYPGVILSHHP HHHHHCCHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCC DTIEILKKYPGDLILVGHTHGGQVNLPFFWSKFTQLENKKYKRGLKIVDKKWAYINRGIG CHHHHHHHCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC SVIHFRWFATPELTLMTLKQG CEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]