Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ybeQ [C]

Identifier: 46445950

GI number: 46445950

Start: 434217

End: 435107

Strand: Direct

Name: ybeQ [C]

Synonym: pc0316

Alternate gene names: 46445950

Gene position: 434217-435107 (Clockwise)

Preceding gene: 46445949

Following gene: 46445951

Centisome position: 17.98

GC content: 33.67

Gene sequence:

>891_bases
ATGATGTCATTTTCTTTCAATAAGTTACTTATTTTATTTACATTGTCTTACAGCTGGCTAGTTAGTGCTTCACAAGGGTT
TTTAGAAGAAAAAAATTTGAATAAAACGGCTAATTTGCCTATTCGGGAAACACTTCAAGAAAGATTAACTTCTTTAGCTC
TTGAAGGGGATATGAACGCCCAGTACAAGCTTGGCATGTTATTAATGAATGGCGAAAAAGAGGATTGTCTTAAAGGCGTT
GAATGGCTTGAAATAGCGGCGGAGCAAGGCCAAGTTGAGGCTCAACTGACTTTAGGAAAGATGTATCAAATAGGCTTGAA
AGTCGAAAGAAATTCTCTTACCTCTCTATACTGGATTTCACAAGCGGCATTGCAAGGAAATGAAAAAGCTATTCAATCCT
TAAAAAACTTATTTTCGACTTTTCAAGAGTTATACAGTATTCATTTACCAAAAGAAGAGAGGAACTATTGGAAAATAGAT
AATCATCAGGTGAGTATTGACGAGTATATTATTGAGTCTGTCCCATTAAATGAAACTGTTACTCATTGGTCGCAAATTTT
TACTATTTCGTTTATGTCCAAAAAAATATTAAATCGAGATTTTAAAACAGCCTTGAGCAGTATGAATGCTGTTAAAGAAT
TGATGAGAAAAAATTATGGGGGCAAGGCTAAATTGACTCCTATACAGGTGACAGATAATGATGTAATTTATGAGTCTTTT
ATCCCTCTTAATAAAACGAATCAGTTTGAAAATGAAATTGTCAGACTTATTAGAACTCCACGAGGTTTGTATCGGATTGC
TTATTCGAGAAAAAATTCGTATATTGACGATAAAACCAAGCATAAGTGGTTAAAAAGTTTGTGTGAAGCAGATTTGATCA
AACTGAAGTAA

Upstream 100 bases:

>100_bases
GAGTAATTATTCATTGCAAGTGAATCATTGTTATTTTTAATTCTCTAAATTTTAATCGATTAATAATTAGATTCTCATTT
TATCCTAATTAAAGGAGTCA

Downstream 100 bases:

>100_bases
TTCTCCTTGATGAATTGTCCTCGGCGCGACTCGAACGCGCGGCCTGTTGCTTAGGAGGCAACCGCTCTATCCACCTGAGC
TACGAGAACATAATGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MMSFSFNKLLILFTLSYSWLVSASQGFLEEKNLNKTANLPIRETLQERLTSLALEGDMNAQYKLGMLLMNGEKEDCLKGV
EWLEIAAEQGQVEAQLTLGKMYQIGLKVERNSLTSLYWISQAALQGNEKAIQSLKNLFSTFQELYSIHLPKEERNYWKID
NHQVSIDEYIIESVPLNETVTHWSQIFTISFMSKKILNRDFKTALSSMNAVKELMRKNYGGKAKLTPIQVTDNDVIYESF
IPLNKTNQFENEIVRLIRTPRGLYRIAYSRKNSYIDDKTKHKWLKSLCEADLIKLK

Sequences:

>Translated_296_residues
MMSFSFNKLLILFTLSYSWLVSASQGFLEEKNLNKTANLPIRETLQERLTSLALEGDMNAQYKLGMLLMNGEKEDCLKGV
EWLEIAAEQGQVEAQLTLGKMYQIGLKVERNSLTSLYWISQAALQGNEKAIQSLKNLFSTFQELYSIHLPKEERNYWKID
NHQVSIDEYIIESVPLNETVTHWSQIFTISFMSKKILNRDFKTALSSMNAVKELMRKNYGGKAKLTPIQVTDNDVIYESF
IPLNKTNQFENEIVRLIRTPRGLYRIAYSRKNSYIDDKTKHKWLKSLCEADLIKLK
>Mature_296_residues
MMSFSFNKLLILFTLSYSWLVSASQGFLEEKNLNKTANLPIRETLQERLTSLALEGDMNAQYKLGMLLMNGEKEDCLKGV
EWLEIAAEQGQVEAQLTLGKMYQIGLKVERNSLTSLYWISQAALQGNEKAIQSLKNLFSTFQELYSIHLPKEERNYWKID
NHQVSIDEYIIESVPLNETVTHWSQIFTISFMSKKILNRDFKTALSSMNAVKELMRKNYGGKAKLTPIQVTDNDVIYESF
IPLNKTNQFENEIVRLIRTPRGLYRIAYSRKNSYIDDKTKHKWLKSLCEADLIKLK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34315; Mature: 34315

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFSFNKLLILFTLSYSWLVSASQGFLEEKNLNKTANLPIRETLQERLTSLALEGDMNA
CCCCCHHHEEEHEEHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
QYKLGMLLMNGEKEDCLKGVEWLEIAAEQGQVEAQLTLGKMYQIGLKVERNSLTSLYWIS
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCEEEECCCCHHHHHHH
QAALQGNEKAIQSLKNLFSTFQELYSIHLPKEERNYWKIDNHQVSIDEYIIESVPLNETV
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHCCCCCHHH
THWSQIFTISFMSKKILNRDFKTALSSMNAVKELMRKNYGGKAKLTPIQVTDNDVIYESF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECC
IPLNKTNQFENEIVRLIRTPRGLYRIAYSRKNSYIDDKTKHKWLKSLCEADLIKLK
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSFSFNKLLILFTLSYSWLVSASQGFLEEKNLNKTANLPIRETLQERLTSLALEGDMNA
CCCCCHHHEEEHEEHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
QYKLGMLLMNGEKEDCLKGVEWLEIAAEQGQVEAQLTLGKMYQIGLKVERNSLTSLYWIS
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHCCEEEECCCCHHHHHHH
QAALQGNEKAIQSLKNLFSTFQELYSIHLPKEERNYWKIDNHQVSIDEYIIESVPLNETV
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHCCCCCHHH
THWSQIFTISFMSKKILNRDFKTALSSMNAVKELMRKNYGGKAKLTPIQVTDNDVIYESF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECC
IPLNKTNQFENEIVRLIRTPRGLYRIAYSRKNSYIDDKTKHKWLKSLCEADLIKLK
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA