Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445938

Identifier: 46445938

GI number: 46445938

Start: 421278

End: 422255

Strand: Direct

Name: 46445938

Synonym: pc0304

Alternate gene names: NA

Gene position: 421278-422255 (Clockwise)

Preceding gene: 46445937

Following gene: 46445939

Centisome position: 17.45

GC content: 30.27

Gene sequence:

>978_bases
ATGTTTTTAAATAAATGGTTTGTTGTCTTTTTAATTTTCCTTCTCAGCTTTCTTGGAATCTACTTTTACAATTCTTTAAC
TGATGGTTTTCGAATTGCTCATATCACTCATCAGTTAGATTTTACACCTTTCTGGAAGACATCCAATTTATCGGAACATG
AAAAAAAGTCTTTGAAAGCTATATTAGATCAAAAATATACTTATCTTGGCAAAGGAGCTCAGTCTTATGCCTTTGTTAGT
GCAGATCACCAATATGTTCTAAAATTTTTTAAATTTAAAAATTTTAAACCACATTTTTTAGTAAAACTTCTTCCTTCCTT
ACCACCTTTTAATCACTACAAACAGCTTTATCTTCAGCGCAAGCAAAAAAAATTGATGAGTGTGTTTAATGGTTATGATA
TTGCATATCAACAAAACAAACTTGAATCAGGTTTAATTTATCTCCATTTATTACCTACAAATTTTTTGAATTATAAGGTA
ACTCTCGAGGATAAAATGGGGATTATTCATAAAGTAGATTTAGATTCTGTCGCTTTTTTAATTCAACGTAAAGGGGAGAC
ACTTGGTAATCATCTAACGAGTTTATTAGAACAAGGAAATCAAGAAAAGGCAAAACAAGCTATCTCAAAAATTTTTACTA
TGTATATGCAAGAGTATCAAAAAGGGATTTATGATCGAGATCATTCTGTGATCGATAACACAGGATTTATTGGAGAAAAC
CCTTTTCATTTAGATGCCGGCAAATTGACACGGGATGATCTGATTAAGCAACGAAAATTTTATAAAAAAGATTTAGAGCA
GGTCGCTTGGAAGATTGATCAATGGATCAAAAAAAAGTACCCAGACTATTATTATTCTATTTCTTCTTACCTCGCAAACA
ATTATAATGAATGGATAGGAGAAATATTTGATCCTGCAAAAATTGATTTAAATCATTATCGAAAAAATCGTCATGTTTTG
AATCAGGCAGAGGAATAA

Upstream 100 bases:

>100_bases
AGGAGCTGCAGCTTTGTTTGGTAAATAAATATTTAATAAAATTAAATTTCGTTTATAATTTTGCAAAACAAAAATAAATA
AAATTTAATAGAGAAAATAA

Downstream 100 bases:

>100_bases
AAATGTATTGGTGGCAGGAGATTAAAAAATCCTGGATCCATTTTGTTTTTCCCGCTACCTGTTTATATTGTAAAGAAAGT
TTACAACCTAGCCAAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS
ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV
TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN
PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL
NQAEE

Sequences:

>Translated_325_residues
MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS
ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV
TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN
PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL
NQAEE
>Mature_325_residues
MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS
ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV
TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN
PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL
NQAEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38645; Mature: 38645

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHH
ILDQKYTYLGKGAQSYAFVSADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQR
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH
KQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKVTLEDKMGIIHKVDLDSVAFL
HHHHHHHHHCCCCCEEHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCHHHHHHH
IQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
EIFDPAKIDLNHYRKNRHVLNQAEE
HHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHH
ILDQKYTYLGKGAQSYAFVSADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQR
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH
KQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKVTLEDKMGIIHKVDLDSVAFL
HHHHHHHHHCCCCCEEHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCHHHHHHH
IQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
EIFDPAKIDLNHYRKNRHVLNQAEE
HHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA