| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445938
Identifier: 46445938
GI number: 46445938
Start: 421278
End: 422255
Strand: Direct
Name: 46445938
Synonym: pc0304
Alternate gene names: NA
Gene position: 421278-422255 (Clockwise)
Preceding gene: 46445937
Following gene: 46445939
Centisome position: 17.45
GC content: 30.27
Gene sequence:
>978_bases ATGTTTTTAAATAAATGGTTTGTTGTCTTTTTAATTTTCCTTCTCAGCTTTCTTGGAATCTACTTTTACAATTCTTTAAC TGATGGTTTTCGAATTGCTCATATCACTCATCAGTTAGATTTTACACCTTTCTGGAAGACATCCAATTTATCGGAACATG AAAAAAAGTCTTTGAAAGCTATATTAGATCAAAAATATACTTATCTTGGCAAAGGAGCTCAGTCTTATGCCTTTGTTAGT GCAGATCACCAATATGTTCTAAAATTTTTTAAATTTAAAAATTTTAAACCACATTTTTTAGTAAAACTTCTTCCTTCCTT ACCACCTTTTAATCACTACAAACAGCTTTATCTTCAGCGCAAGCAAAAAAAATTGATGAGTGTGTTTAATGGTTATGATA TTGCATATCAACAAAACAAACTTGAATCAGGTTTAATTTATCTCCATTTATTACCTACAAATTTTTTGAATTATAAGGTA ACTCTCGAGGATAAAATGGGGATTATTCATAAAGTAGATTTAGATTCTGTCGCTTTTTTAATTCAACGTAAAGGGGAGAC ACTTGGTAATCATCTAACGAGTTTATTAGAACAAGGAAATCAAGAAAAGGCAAAACAAGCTATCTCAAAAATTTTTACTA TGTATATGCAAGAGTATCAAAAAGGGATTTATGATCGAGATCATTCTGTGATCGATAACACAGGATTTATTGGAGAAAAC CCTTTTCATTTAGATGCCGGCAAATTGACACGGGATGATCTGATTAAGCAACGAAAATTTTATAAAAAAGATTTAGAGCA GGTCGCTTGGAAGATTGATCAATGGATCAAAAAAAAGTACCCAGACTATTATTATTCTATTTCTTCTTACCTCGCAAACA ATTATAATGAATGGATAGGAGAAATATTTGATCCTGCAAAAATTGATTTAAATCATTATCGAAAAAATCGTCATGTTTTG AATCAGGCAGAGGAATAA
Upstream 100 bases:
>100_bases AGGAGCTGCAGCTTTGTTTGGTAAATAAATATTTAATAAAATTAAATTTCGTTTATAATTTTGCAAAACAAAAATAAATA AAATTTAATAGAGAAAATAA
Downstream 100 bases:
>100_bases AAATGTATTGGTGGCAGGAGATTAAAAAATCCTGGATCCATTTTGTTTTTCCCGCTACCTGTTTATATTGTAAAGAAAGT TTACAACCTAGCCAAGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL NQAEE
Sequences:
>Translated_325_residues MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL NQAEE >Mature_325_residues MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKAILDQKYTYLGKGAQSYAFVS ADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQRKQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKV TLEDKMGIIHKVDLDSVAFLIQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIGEIFDPAKIDLNHYRKNRHVL NQAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38645; Mature: 38645
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHH ILDQKYTYLGKGAQSYAFVSADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQR HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH KQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKVTLEDKMGIIHKVDLDSVAFL HHHHHHHHHCCCCCEEHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCHHHHHHH IQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH EIFDPAKIDLNHYRKNRHVLNQAEE HHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLNKWFVVFLIFLLSFLGIYFYNSLTDGFRIAHITHQLDFTPFWKTSNLSEHEKKSLKA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHH ILDQKYTYLGKGAQSYAFVSADHQYVLKFFKFKNFKPHFLVKLLPSLPPFNHYKQLYLQR HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH KQKKLMSVFNGYDIAYQQNKLESGLIYLHLLPTNFLNYKVTLEDKMGIIHKVDLDSVAFL HHHHHHHHHCCCCCEEHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCHHHHHHH IQRKGETLGNHLTSLLEQGNQEKAKQAISKIFTMYMQEYQKGIYDRDHSVIDNTGFIGEN HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PFHLDAGKLTRDDLIKQRKFYKKDLEQVAWKIDQWIKKKYPDYYYSISSYLANNYNEWIG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH EIFDPAKIDLNHYRKNRHVLNQAEE HHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA