Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445909

Identifier: 46445909

GI number: 46445909

Start: 386518

End: 387192

Strand: Direct

Name: 46445909

Synonym: pc0275

Alternate gene names: NA

Gene position: 386518-387192 (Clockwise)

Preceding gene: 46445899

Following gene: 46445910

Centisome position: 16.01

GC content: 33.04

Gene sequence:

>675_bases
TTGATAGAATTTGAAGATTTTTTATCAGAAGAACAAGTATCAACTGTCAATCGGGCAATAGATCGAGTCTTGACTGAACG
TTTAAAAGTGACTCCTCAACGTCTAAAACTTCTTTCTTCTGAATGCGTATTTTCTCAAGGAAGAGATTTGTGGCGATCAA
ATGAAGAGCTAAAAAAAATCGTTTGCCAGCCAAAATTTGCTGAAATAGCTTCTGAATTAATTGAAAAAAAACCTTTGCGT
TTAGGATATGACCAGTTATTTCCAGCTCATTACCAAACTAAATTTAGTTCTAAACAACAAAGAATTTATGCACAATTTCT
TGAACAAACTCTAAGTTTAGAATCGATTAGTGGCGTAAGTGGCGTCCTTTGTGGTTTAATGATATGTCTTGGAGAAAAAG
GTGAGCTTTTTTCGCAAGAGCAATTCTCTATTGAAGGAATAGATATTTATTCAAGGCAAGCAGGCCATGCTATTTATTTT
AATCCAAATGCTCTAGTGAATTGGCGTAATTTTTATGCGCATTCTGCTTATCGTTATTTTCTAATTGTTTATACGCAAAA
CCATTCTCATTATCAATTACAGGTAAGTGATCCTCATACTCATTTTCTTAAACAATTAGGATATGTTTTTAATGATAAAT
TGAACGATCGATTACATCCGATCGTTTATCGTTAG

Upstream 100 bases:

>100_bases
CACTTATAATTGAACGCATTATATTACCTCATTATTATAATTTTATTTTATGAAATTTGCTATTGCTAAAGAACATAGAG
ATTTTTTTCAAAAAAATGGT

Downstream 100 bases:

>100_bases
AGTTTAATCTCGTGGAATGGCAACTAATTGATTCTGGCAAATTGTCTCCGCAAGCCATTATGGCTAAAGATGAAGAATTA
CTAAAAAATCTTCAGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIEFEDFLSEEQVSTVNRAIDRVLTERLKVTPQRLKLLSSECVFSQGRDLWRSNEELKKIVCQPKFAEIASELIEKKPLR
LGYDQLFPAHYQTKFSSKQQRIYAQFLEQTLSLESISGVSGVLCGLMICLGEKGELFSQEQFSIEGIDIYSRQAGHAIYF
NPNALVNWRNFYAHSAYRYFLIVYTQNHSHYQLQVSDPHTHFLKQLGYVFNDKLNDRLHPIVYR

Sequences:

>Translated_224_residues
MIEFEDFLSEEQVSTVNRAIDRVLTERLKVTPQRLKLLSSECVFSQGRDLWRSNEELKKIVCQPKFAEIASELIEKKPLR
LGYDQLFPAHYQTKFSSKQQRIYAQFLEQTLSLESISGVSGVLCGLMICLGEKGELFSQEQFSIEGIDIYSRQAGHAIYF
NPNALVNWRNFYAHSAYRYFLIVYTQNHSHYQLQVSDPHTHFLKQLGYVFNDKLNDRLHPIVYR
>Mature_224_residues
MIEFEDFLSEEQVSTVNRAIDRVLTERLKVTPQRLKLLSSECVFSQGRDLWRSNEELKKIVCQPKFAEIASELIEKKPLR
LGYDQLFPAHYQTKFSSKQQRIYAQFLEQTLSLESISGVSGVLCGLMICLGEKGELFSQEQFSIEGIDIYSRQAGHAIYF
NPNALVNWRNFYAHSAYRYFLIVYTQNHSHYQLQVSDPHTHFLKQLGYVFNDKLNDRLHPIVYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26209; Mature: 26209

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFEDFLSEEQVSTVNRAIDRVLTERLKVTPQRLKLLSSECVFSQGRDLWRSNEELKKI
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHH
VCQPKFAEIASELIEKKPLRLGYDQLFPAHYQTKFSSKQQRIYAQFLEQTLSLESISGVS
HCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GVLCGLMICLGEKGELFSQEQFSIEGIDIYSRQAGHAIYFNPNALVNWRNFYAHSAYRYF
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEHHHHHHHCEEEEE
LIVYTQNHSHYQLQVSDPHTHFLKQLGYVFNDKLNDRLHPIVYR
EEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEFEDFLSEEQVSTVNRAIDRVLTERLKVTPQRLKLLSSECVFSQGRDLWRSNEELKKI
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHH
VCQPKFAEIASELIEKKPLRLGYDQLFPAHYQTKFSSKQQRIYAQFLEQTLSLESISGVS
HCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GVLCGLMICLGEKGELFSQEQFSIEGIDIYSRQAGHAIYFNPNALVNWRNFYAHSAYRYF
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEHHHHHHHCEEEEE
LIVYTQNHSHYQLQVSDPHTHFLKQLGYVFNDKLNDRLHPIVYR
EEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA