Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445899

Identifier: 46445899

GI number: 46445899

Start: 378091

End: 378417

Strand: Direct

Name: 46445899

Synonym: pc0265

Alternate gene names: NA

Gene position: 378091-378417 (Clockwise)

Preceding gene: 46445897

Following gene: 46445909

Centisome position: 15.66

GC content: 30.28

Gene sequence:

>327_bases
ATGATGACAATTGTCATTTTATTTCATCAATCAAGTTATCGAATATTTAAGCACTTTTATGAATATGTTATTAATTACTT
AGGCAAAGAATTTTCAAACTCAATAAGCACTAGTTGCTTTGTTTATTTAGAGAAGAACCTTTTTGTTCCTCTATTTGCTT
ATCTTCTGGACAAAAGAGGAGAAGTCACAGGAATTGCTTTTATTGATTTTCCATCGATAGATGTTTGCCATTATAAACGC
ATGAAAAGGAATAAGATCCTCAAAGATTTGGCCAAAAGAGGAAAAACAGCCTCAGGATGTTTTTTGGATTTAAATGACAT
TTCATAA

Upstream 100 bases:

>100_bases
AAAATTATTTATGAAGATTTAACCAAAGAACGAAGAAACTCAGGTAATTGACCATGGCAAAACAAAGCGAAGACCTCAAC
CTGAATTATCAATACCAGAG

Downstream 100 bases:

>100_bases
TCAATGAAAAAGAAGAGATTTTGGTTTTTCGAATTAACTAGACATGTTGCTGATGTCTCTATTGCCGAAACCTTATCGAA
AGGGATTTTGGAGAAGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; ISPg3 Transposase

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MMTIVILFHQSSYRIFKHFYEYVINYLGKEFSNSISTSCFVYLEKNLFVPLFAYLLDKRGEVTGIAFIDFPSIDVCHYKR
MKRNKILKDLAKRGKTASGCFLDLNDIS

Sequences:

>Translated_108_residues
MMTIVILFHQSSYRIFKHFYEYVINYLGKEFSNSISTSCFVYLEKNLFVPLFAYLLDKRGEVTGIAFIDFPSIDVCHYKR
MKRNKILKDLAKRGKTASGCFLDLNDIS
>Mature_108_residues
MMTIVILFHQSSYRIFKHFYEYVINYLGKEFSNSISTSCFVYLEKNLFVPLFAYLLDKRGEVTGIAFIDFPSIDVCHYKR
MKRNKILKDLAKRGKTASGCFLDLNDIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12638; Mature: 12638

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTIVILFHQSSYRIFKHFYEYVINYLGKEFSNSISTSCFVYLEKNLFVPLFAYLLDKRG
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC
EVTGIAFIDFPSIDVCHYKRMKRNKILKDLAKRGKTASGCFLDLNDIS
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure
MMTIVILFHQSSYRIFKHFYEYVINYLGKEFSNSISTSCFVYLEKNLFVPLFAYLLDKRG
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC
EVTGIAFIDFPSIDVCHYKRMKRNKILKDLAKRGKTASGCFLDLNDIS
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA