| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445814
Identifier: 46445814
GI number: 46445814
Start: 270611
End: 271741
Strand: Reverse
Name: 46445814
Synonym: pc0180
Alternate gene names: NA
Gene position: 271741-270611 (Counterclockwise)
Preceding gene: 46445815
Following gene: 46445811
Centisome position: 11.25
GC content: 34.39
Gene sequence:
>1131_bases ATGACTCAAGGAAGTGATCGTTTTCAATTTTTGGATGGACTCAGAGGAATAGCAGCTTTATGGGTCGTTCTCCTTCATTT TCATACGCTCATTAATGAAAGGTCTACTAATCAATTTTCTTGGGTTCTTAATCAAATATTGCCACATGGACATATAGGAG TTAACATTTTTTTTGTCTTGAGCGGTTTCGTTATAGCTTATAGCATTAGACAAAACATTATTACCTTTCCTTTCATTGCT CGTTTTTTTATTCGGAGATCTATTCGCTTAGATCCCCCGTATTGGGCAGCTTTACTCATTTTGACTGGGCTGATTTTAGC CGGACCCTTTTTCTTTCAAAGAGGGATAGAGTATGTACCTAGCTACCAGCACCTGTTTCTCAATGCTTTTTATATTCACA ATTTTTTCGAGTTAAAAAGTATTTTACCTGTTGCTTGGACACTTGCCTTAGAATTTCAATTCTACTTTGTCTTCGTTTTT CTTCTTAAATCTGTACAATCTTTAAATATTCAAATGAATCATTCTGAATTCAACTATTCTACAAAATATGCAACAGGTTT ATTTTGGTTTTTATTCATCTTATCCCTCATGCAGATGTCTCATATAGGATTATTTTTGGAATTACCTGGTTTTTTTCTGC CTTTCTGGTATAGCTTTTTTATTGGTTCTTTGCTTTGTTGGGCGATGTTGAGCTTAGTATCCGAATTTCAGCTTTTTTTA TTCTTTACTGCCATGCTTCTTTTTTATGTGATTGGAAAAAATGAAGATATTTTGATCACTTCAGCTGTCGCTTTATCTAT TCAATTATGCATAAAGAAAAATAAACTCCACAGCTACTTAAGCTCTTATCCCTTTCAATACTTAGGTAAGATTTCTTATA GCTTATACTTGACTCACTGGTGCGTCGGGACTAAATTGATCAGTCTTATTTCCTATGCTTTAAATACAGGTATTAACGAA ATCCCAGCTTCTATTCTTCTTATAATGGGTACTCTCCCAAGTCTTGCGGTTGCTCACATATTTTATCATTACATTGAACA ACCTTGCCTGCATTGGAGCCGAAAAATTAAATTCGAAACTATTTTTCCACTTCAGAATTTCCGAGCCACAAAAGAAAAAC AAGGTCCATGA
Upstream 100 bases:
>100_bases TATTCTTCACAAATCCAACAATCCAAATATGAATTTGGAACTGACAAAGATGGAATTAGCTTAGGAAATCGTTGGTTCCT GTCAAAGCACTTATAAAGCC
Downstream 100 bases:
>100_bases GGATGGTTCAGCTGGTCAAAATTAATATCAATACGGTTATAGCCAAAATGGTAGCAACAATTAAGTATATCTTCCCTAGT TAACCACTGACTTGTATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTQGSDRFQFLDGLRGIAALWVVLLHFHTLINERSTNQFSWVLNQILPHGHIGVNIFFVLSGFVIAYSIRQNIITFPFIA RFFIRRSIRLDPPYWAALLILTGLILAGPFFFQRGIEYVPSYQHLFLNAFYIHNFFELKSILPVAWTLALEFQFYFVFVF LLKSVQSLNIQMNHSEFNYSTKYATGLFWFLFILSLMQMSHIGLFLELPGFFLPFWYSFFIGSLLCWAMLSLVSEFQLFL FFTAMLLFYVIGKNEDILITSAVALSIQLCIKKNKLHSYLSSYPFQYLGKISYSLYLTHWCVGTKLISLISYALNTGINE IPASILLIMGTLPSLAVAHIFYHYIEQPCLHWSRKIKFETIFPLQNFRATKEKQGP
Sequences:
>Translated_376_residues MTQGSDRFQFLDGLRGIAALWVVLLHFHTLINERSTNQFSWVLNQILPHGHIGVNIFFVLSGFVIAYSIRQNIITFPFIA RFFIRRSIRLDPPYWAALLILTGLILAGPFFFQRGIEYVPSYQHLFLNAFYIHNFFELKSILPVAWTLALEFQFYFVFVF LLKSVQSLNIQMNHSEFNYSTKYATGLFWFLFILSLMQMSHIGLFLELPGFFLPFWYSFFIGSLLCWAMLSLVSEFQLFL FFTAMLLFYVIGKNEDILITSAVALSIQLCIKKNKLHSYLSSYPFQYLGKISYSLYLTHWCVGTKLISLISYALNTGINE IPASILLIMGTLPSLAVAHIFYHYIEQPCLHWSRKIKFETIFPLQNFRATKEKQGP >Mature_375_residues TQGSDRFQFLDGLRGIAALWVVLLHFHTLINERSTNQFSWVLNQILPHGHIGVNIFFVLSGFVIAYSIRQNIITFPFIAR FFIRRSIRLDPPYWAALLILTGLILAGPFFFQRGIEYVPSYQHLFLNAFYIHNFFELKSILPVAWTLALEFQFYFVFVFL LKSVQSLNIQMNHSEFNYSTKYATGLFWFLFILSLMQMSHIGLFLELPGFFLPFWYSFFIGSLLCWAMLSLVSEFQLFLF FTAMLLFYVIGKNEDILITSAVALSIQLCIKKNKLHSYLSSYPFQYLGKISYSLYLTHWCVGTKLISLISYALNTGINEI PASILLIMGTLPSLAVAHIFYHYIEQPCLHWSRKIKFETIFPLQNFRATKEKQGP
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43773; Mature: 43642
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGSDRFQFLDGLRGIAALWVVLLHFHTLINERSTNQFSWVLNQILPHGHIGVNIFFVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH SGFVIAYSIRQNIITFPFIARFFIRRSIRLDPPYWAALLILTGLILAGPFFFQRGIEYVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYQHLFLNAFYIHNFFELKSILPVAWTLALEFQFYFVFVFLLKSVQSLNIQMNHSEFNYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC TKYATGLFWFLFILSLMQMSHIGLFLELPGFFLPFWYSFFIGSLLCWAMLSLVSEFQLFL HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTAMLLFYVIGKNEDILITSAVALSIQLCIKKNKLHSYLSSYPFQYLGKISYSLYLTHW HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH CVGTKLISLISYALNTGINEIPASILLIMGTLPSLAVAHIFYHYIEQPCLHWSRKIKFET HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IFPLQNFRATKEKQGP ECCHHHCCCCCCCCCC >Mature Secondary Structure TQGSDRFQFLDGLRGIAALWVVLLHFHTLINERSTNQFSWVLNQILPHGHIGVNIFFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH SGFVIAYSIRQNIITFPFIARFFIRRSIRLDPPYWAALLILTGLILAGPFFFQRGIEYVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYQHLFLNAFYIHNFFELKSILPVAWTLALEFQFYFVFVFLLKSVQSLNIQMNHSEFNYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCC TKYATGLFWFLFILSLMQMSHIGLFLELPGFFLPFWYSFFIGSLLCWAMLSLVSEFQLFL HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTAMLLFYVIGKNEDILITSAVALSIQLCIKKNKLHSYLSSYPFQYLGKISYSLYLTHW HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH CVGTKLISLISYALNTGINEIPASILLIMGTLPSLAVAHIFYHYIEQPCLHWSRKIKFET HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IFPLQNFRATKEKQGP ECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA