| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445809
Identifier: 46445809
GI number: 46445809
Start: 262984
End: 264057
Strand: Reverse
Name: 46445809
Synonym: pc0175
Alternate gene names: NA
Gene position: 264057-262984 (Counterclockwise)
Preceding gene: 46445810
Following gene: 46445799
Centisome position: 10.94
GC content: 36.69
Gene sequence:
>1074_bases ATGAATGGGCCCATCTCTTTTCAAACTAGACTGACAGGAAACCAAGCATTTTATGATCACTCTGACTACATAACATCTAC TAAGGAAGACTTTAATTTCCCTCACGCTTTGTCTACTACTTATCGATGGAATGCGGAACATAAAATTATTCGAATTATTA AAGACGTTTTTTCATTAATTATTTTTCCCTTTACTATCATGCATATTATCGCCGGCAAAATAGCCCTACTTCCCGCCTCC TCTCCTACTTTACTTGAACGTTCAGAAAATTTTGCTCATAAGGTAAGAATGGCCATTGATCTCCAAAGTTCATGGAAATA TAAACGTTTAACAATAAAAGTCGATGGCTATAAGATTGATGCCATGATCATGGGCCAAAAAGAAACGTTGCATAACGGAA GATGGGTGCTAGTTTCTAACGGGAATGCAGAATTTTATGAGACTAAATTGCTCGATGGACAATTCAAAAAACTTCTTTTT CAAATTAATGGTAACGCCATCTTTTTTAACTATCCGGGAGTCGGCGCCAGCTCAAATTTACCCAATAAAAATGCCATGAC AAAAGCTTATCAAGCGCTCTTACGCTTTTTAGAAGATCAAGAAAAAGGAATAGCAGCCAAAGAAATTATTGGATATGGAC ATTCCATTGGAGCAGGAGTTCAAGCAGAAGCCTTGAAAGGCCACGCATTAAAATCAGGAATAAAATATGTCTGGGTAAAA AGCCGAACCTTTTCTGATTTAGCAACTACTGCTGGCCTCATTACCAATAAAGCCTTGGGGCTTTTAGTGAAAGTCATAGG ATGGAATATTGATTGTGTAGAGTCTTCTAAAACATTACAAGCTCCCGAAATTATTCTACAAACAGCCTCTGTCGCTAATT ATCAAGAATTGACGAATAGTTCAAAAATTATCTACGATGGAATCATCCCTGAAAATGCAACATTAGCTAAAGTCTTATTG GATCAAGGGTGCTCAATAAGTAAGAAACGTATTATTGGTGTCCCTGAATCGCACAATGAAGAACTAACTGAGCTTCAATA TTTAGCAAATAGTATTAACCAAATGCTTGCTTAA
Upstream 100 bases:
>100_bases AATTAAATAATTTTTAACTATTAATTCATATTTTTTTTGAAATTTAATTCACTTTATTATACAATTTTTTTATTAAAAAC AATTACGGAGACATAACAAA
Downstream 100 bases:
>100_bases TCTTTGAGCCAATCAGGCCAATGTTAATTCGATTTGTTGATAACGCCGCATCTGATCTCGCCAATCTGCGGCTTCTTCAA ATCGAAATTCTTTGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA
Sequences:
>Translated_357_residues MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA >Mature_357_residues MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39735; Mature: 39735
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLI CCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHH IFPFTIMHIIAGKIALLPASSPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKID HHHHHHHHHHHCCEEEECCCCCHHHHHCHHHHHHEEEEEEECCCCCEEEEEEEECCEEEE AMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLFQINGNAIFFNYPGVGASSNL EEEECCHHHCCCCCEEEEECCCCCEEEEECCCHHHHEEEEEECCCEEEEECCCCCCCCCC PNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCEEEEEE SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC SKIIYDGIIPENATLAKVLLDQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA CCEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLI CCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHH IFPFTIMHIIAGKIALLPASSPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKID HHHHHHHHHHHCCEEEECCCCCHHHHHCHHHHHHEEEEEEECCCCCEEEEEEEECCEEEE AMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLFQINGNAIFFNYPGVGASSNL EEEECCHHHCCCCCEEEEECCCCCEEEEECCCHHHHEEEEEECCCEEEEECCCCCCCCCC PNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCEEEEEE SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC SKIIYDGIIPENATLAKVLLDQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA CCEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA