Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445809

Identifier: 46445809

GI number: 46445809

Start: 262984

End: 264057

Strand: Reverse

Name: 46445809

Synonym: pc0175

Alternate gene names: NA

Gene position: 264057-262984 (Counterclockwise)

Preceding gene: 46445810

Following gene: 46445799

Centisome position: 10.94

GC content: 36.69

Gene sequence:

>1074_bases
ATGAATGGGCCCATCTCTTTTCAAACTAGACTGACAGGAAACCAAGCATTTTATGATCACTCTGACTACATAACATCTAC
TAAGGAAGACTTTAATTTCCCTCACGCTTTGTCTACTACTTATCGATGGAATGCGGAACATAAAATTATTCGAATTATTA
AAGACGTTTTTTCATTAATTATTTTTCCCTTTACTATCATGCATATTATCGCCGGCAAAATAGCCCTACTTCCCGCCTCC
TCTCCTACTTTACTTGAACGTTCAGAAAATTTTGCTCATAAGGTAAGAATGGCCATTGATCTCCAAAGTTCATGGAAATA
TAAACGTTTAACAATAAAAGTCGATGGCTATAAGATTGATGCCATGATCATGGGCCAAAAAGAAACGTTGCATAACGGAA
GATGGGTGCTAGTTTCTAACGGGAATGCAGAATTTTATGAGACTAAATTGCTCGATGGACAATTCAAAAAACTTCTTTTT
CAAATTAATGGTAACGCCATCTTTTTTAACTATCCGGGAGTCGGCGCCAGCTCAAATTTACCCAATAAAAATGCCATGAC
AAAAGCTTATCAAGCGCTCTTACGCTTTTTAGAAGATCAAGAAAAAGGAATAGCAGCCAAAGAAATTATTGGATATGGAC
ATTCCATTGGAGCAGGAGTTCAAGCAGAAGCCTTGAAAGGCCACGCATTAAAATCAGGAATAAAATATGTCTGGGTAAAA
AGCCGAACCTTTTCTGATTTAGCAACTACTGCTGGCCTCATTACCAATAAAGCCTTGGGGCTTTTAGTGAAAGTCATAGG
ATGGAATATTGATTGTGTAGAGTCTTCTAAAACATTACAAGCTCCCGAAATTATTCTACAAACAGCCTCTGTCGCTAATT
ATCAAGAATTGACGAATAGTTCAAAAATTATCTACGATGGAATCATCCCTGAAAATGCAACATTAGCTAAAGTCTTATTG
GATCAAGGGTGCTCAATAAGTAAGAAACGTATTATTGGTGTCCCTGAATCGCACAATGAAGAACTAACTGAGCTTCAATA
TTTAGCAAATAGTATTAACCAAATGCTTGCTTAA

Upstream 100 bases:

>100_bases
AATTAAATAATTTTTAACTATTAATTCATATTTTTTTTGAAATTTAATTCACTTTATTATACAATTTTTTTATTAAAAAC
AATTACGGAGACATAACAAA

Downstream 100 bases:

>100_bases
TCTTTGAGCCAATCAGGCCAATGTTAATTCGATTTGTTGATAACGCCGCATCTGATCTCGCCAATCTGCGGCTTCTTCAA
ATCGAAATTCTTTGGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS
SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF
QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK
SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL
DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA

Sequences:

>Translated_357_residues
MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS
SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF
QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK
SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL
DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA
>Mature_357_residues
MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLIIFPFTIMHIIAGKIALLPAS
SPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKIDAMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLF
QINGNAIFFNYPGVGASSNLPNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK
SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNSSKIIYDGIIPENATLAKVLL
DQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39735; Mature: 39735

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLI
CCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
IFPFTIMHIIAGKIALLPASSPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKID
HHHHHHHHHHHCCEEEECCCCCHHHHHCHHHHHHEEEEEEECCCCCEEEEEEEECCEEEE
AMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLFQINGNAIFFNYPGVGASSNL
EEEECCHHHCCCCCEEEEECCCCCEEEEECCCHHHHEEEEEECCCEEEEECCCCCCCCCC
PNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCEEEEEE
SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
SKIIYDGIIPENATLAKVLLDQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA
CCEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGPISFQTRLTGNQAFYDHSDYITSTKEDFNFPHALSTTYRWNAEHKIIRIIKDVFSLI
CCCCCEEEEEECCCCEEECCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
IFPFTIMHIIAGKIALLPASSPTLLERSENFAHKVRMAIDLQSSWKYKRLTIKVDGYKID
HHHHHHHHHHHCCEEEECCCCCHHHHHCHHHHHHEEEEEEECCCCCEEEEEEEECCEEEE
AMIMGQKETLHNGRWVLVSNGNAEFYETKLLDGQFKKLLFQINGNAIFFNYPGVGASSNL
EEEECCHHHCCCCCEEEEECCCCCEEEEECCCHHHHEEEEEECCCEEEEECCCCCCCCCC
PNKNAMTKAYQALLRFLEDQEKGIAAKEIIGYGHSIGAGVQAEALKGHALKSGIKYVWVK
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHCHHHHCCCEEEEEE
SRTFSDLATTAGLITNKALGLLVKVIGWNIDCVESSKTLQAPEIILQTASVANYQELTNS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
SKIIYDGIIPENATLAKVLLDQGCSISKKRIIGVPESHNEELTELQYLANSINQMLA
CCEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA