Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445792

Identifier: 46445792

GI number: 46445792

Start: 236401

End: 238191

Strand: Reverse

Name: 46445792

Synonym: pc0158

Alternate gene names: NA

Gene position: 238191-236401 (Counterclockwise)

Preceding gene: 46445793

Following gene: 46445789

Centisome position: 9.87

GC content: 33.28

Gene sequence:

>1791_bases
GTGATGAAAAACGAAGATGGCAAAAATCAAATTCCCCCTCATTCTTTGTCTCATGTTGTTGATATCCTAAAGACTGCAAT
TAAGAAAATCGATATTTTTACACAACCTGAAGCGTCTAGTTTAGAAGTCAAAGAGGACGGAAGTTTAATTGCGAAGAAAA
AAAACCGCCTCGAAAAATTTCTAGGGTTTGCAAAGTCTTTTATGGGGCCCTTATTGTTTGCAACAATACGCCATCAACAA
GAAAAAAAACTATATGATCTCAAGCAACAAATTTTGCAAGCAAGAGACGTTTTACAAAGTCACTCCTCATTAATTGAAAA
ATTAAAAACTGGAGATTCCTCACAGCAAAAGCTAGCCAATTCCGCTTTAGAAGCCATCCAACGTTATAATTCAATTTTAA
AAAAAGATTATAAATCTTTAGCAAGATATGACTTCTATAATTATGAGCGTAATAATCTTTTATCCGATAAAGAAATTAAA
GGACAACTGATTCAATTGCCTCATACCGTTTCTATTAAATACGACGCAAGTGTTTATTCCGATAAAACTAAAACAACTTT
GAAAGAATTAGGAATAGCATTTCAAGCTAACTCTTTTAAAAAAACGCATGCCGTTAAGCAAACTACGCATAAAAAAGCTG
AACAATTCATGCTTGATACATTTCGCATGAAGGCGATTCGGATGATACAATCGCATCTTCCGCAATCCTATTCAACTGCT
GAAATTTTACAACTCATTACTCAAAGCCCTATTAACTTGGAATTGGAAAATGATCTTGTATTAATAAGACAGCAATTAAC
TATAGGTCCAGGGTCTATTATTATATTATTTGGATCATTTAAGCAGTCTTCCGATTTAATGAGCATGCCTATTATTGATC
ATATTCAACTCTCTTCGGAATCCACACATTCCGGGTTTCCCTATCCTTCTCAACACTGTGGATGGGCGTTAATAGATGAG
TTAGTGCATGCCTATACTCTGAGAACAGAGCAAATCCCCTTATATAGACAAATTGAATCTCGCAAAAAAAAACTTTCCCA
ACTCTTATTATTTGATCCTGATTATATTGCTAAAAGCTATCAACAATTCAAACTCAAGCGAGAAAATTTTGATAAAAATA
AAGCGATTATTTTACCTTTGCATAGGCAATTACAAGAAGCTATTTTAAAAGGTTGTTTTCTATTTACCGAAAACAACAAA
AAAATACTCTCCATTTTTTATGAAAAAATTCATTCGTCTGTTTCTCCTTTCGATCTTCTCACATCTCTTCAAGAAGAAAT
TACAAGGAAATTTATTCAATATCCAGCTAAGCTACTGGAAGACGAGTGGTTAGAAGGCAATCAAACTCTTCTTCGTAAAG
GAACTCCAGCTGAAAGATTCCAACAAGCTAAGACCATCCTAGAAACAAGCCGAGAACAAATGATTTCTGATATTTCAGAT
TTAGAAGAAAATGACATATCAGCTTATATCCGTCTTATCGGTTCGGCGCTTGGCAAAGCCTCTCAAAATATTCTTCTACA
ATACTTTTCTGAAAAAATCGGTTACGCCCCTCCTATGCTTAGCGATTTTGAAAGAAAGGTTCAGCTTTGTGCGTTCGAAC
AATTATTAGTTTTTCTTGATGATATGGAAAAACCTATTGACCCAACTACTGATTTTATTCAAGATTTGATACAAAAAACT
CAAAAAGATTTGGCAATTTTTACACAAACAATAGATGAATTACCCGCGGAAGCTTTAATTAATGAGTTAGAAATTTATTT
TAATTCTAGATATAATAGTATAGTTAAATAA

Upstream 100 bases:

>100_bases
TTAATCTAATATTTATAGATTGCCTCTATTTTTATTTTCATTTATCAAAATTTTTTTAAAAATTAATTTCCAAATGAAAA
GTTTAACGGACCGACCATAC

Downstream 100 bases:

>100_bases
AACTAAAATTTATTATAAAAATAATTCTATGTTTTCTTCTAATCTAAGGAAATCCTCTTAAAAACTCTCAGCAATAATGT
ATTAAAACTATGGCTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ
EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK
GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA
EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE
LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK
KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD
LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT
QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK

Sequences:

>Translated_596_residues
MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ
EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK
GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA
EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE
LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK
KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD
LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT
QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK
>Mature_596_residues
MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ
EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK
GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA
EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE
LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK
KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD
LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT
QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68694; Mature: 68694

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
LGFAKSFMGPLLFATIRHQQEKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIKGQLIQLPHTVSIKYDASVYS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEECCCEEEEEECCHHHC
DKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA
CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSE
HHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCHHHHCCCCC
STHSGFPYPSQHCGWALIDELVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSY
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNKKILSIFYEKIHSSVSPFDLL
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHH
TSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DMEKPIDPTTDFIQDLIQKTQKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
LGFAKSFMGPLLFATIRHQQEKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIKGQLIQLPHTVSIKYDASVYS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEECCCEEEEEECCHHHC
DKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA
CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSE
HHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCHHHHCCCCC
STHSGFPYPSQHCGWALIDELVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSY
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNKKILSIFYEKIHSSVSPFDLL
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHH
TSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DMEKPIDPTTDFIQDLIQKTQKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA