Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445787

Identifier: 46445787

GI number: 46445787

Start: 229898

End: 230818

Strand: Direct

Name: 46445787

Synonym: pc0153

Alternate gene names: NA

Gene position: 229898-230818 (Clockwise)

Preceding gene: 46445786

Following gene: 46445788

Centisome position: 9.52

GC content: 35.61

Gene sequence:

>921_bases
ATGCAAGAATCAGGCGAACCATTTGAACATTATCCTTTAGTAGATGCAATGGATCATGAAATTTTGATGCATCGAGACGC
TCATTTTGGCGGTCTCTTTTCTGTCATGTTAGATTATTATAAAGGAGAAGGAAAAGGAATTCAGCCTGACTTTACAATTG
AGAGGATTGAACGATTGGCAACTCTCGAAGCTGAAATGAAAGAAAATTTAGCAGCTTTATTTTTTACAGCATCGGAAGCG
CAAAAAGTGGCTGACGCGAGAGCAGCGTATCAAAATTTACGTTCTATTTATGAAATTCAAAATCAACAAAATCGTTTTCC
TCGATTGATTGCTGATTTAATTTTATCTGAAGACGAAGAAGCAGAAAAAGAAGTGAATGCCATTGTGGCAGAGAAAGATA
AAATTGTTCCTCTTCTTATTGAATGTTTGGGCAATGAGCAATTTTATGATCCAATTTTTCCTGGCTATGGATTGCTACCC
TCTTTGATAGTTAAATGTTTAGGTAAAATTGGAGATAAACGAGCCATTATTTCTTTATTTGAAGCGCTTGGTCAAGGAGA
TTTTTTTGCAGATGAACAAATACTTAGAGCGCTCAAAGCAATTGGGGATCCTGCAAAGGCTTTTTTATTAAAAGTTGTTT
GTGGGAAACCTTTGAATGAAGATAATGAACGTGCTGCGATTGGTTTACTTGCTTTTAAAGAAAATCCTGAAGTTGCAAAT
ACATGTTTTAATTTATTAAAAAACGAAGATATTCAAAAAAGACCTTGCCTCTCCACTTATTTGGCTTTAGCTTGCATAGG
TTTACAAGATGAGCATTTAAGACAAGAATTTCGGCAAATGGTTACCCAGCCGCAACTCAATGCAATGTTGAAAGAGGATA
TGAAAGGAATTCTTCACAGTTGGGATCATCTCGATCAATAA

Upstream 100 bases:

>100_bases
GTGGACCTTTTGTTAGATCTAGCTATAACGCAAATTTAGTTCTTATGCGTGCAAATCAAAAAGAAGCAATTGTTAACAGC
GAATAGTAATTAGGTGAATG

Downstream 100 bases:

>100_bases
ATCCTCGTATTTTAATAATCAATAGAGTTAAAAAACAATGAAGCTAAAAACATTAACGAACAAATAAAAGAACTTGCCAG
AAAAGCTCTTTGAGAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MQESGEPFEHYPLVDAMDHEILMHRDAHFGGLFSVMLDYYKGEGKGIQPDFTIERIERLATLEAEMKENLAALFFTASEA
QKVADARAAYQNLRSIYEIQNQQNRFPRLIADLILSEDEEAEKEVNAIVAEKDKIVPLLIECLGNEQFYDPIFPGYGLLP
SLIVKCLGKIGDKRAIISLFEALGQGDFFADEQILRALKAIGDPAKAFLLKVVCGKPLNEDNERAAIGLLAFKENPEVAN
TCFNLLKNEDIQKRPCLSTYLALACIGLQDEHLRQEFRQMVTQPQLNAMLKEDMKGILHSWDHLDQ

Sequences:

>Translated_306_residues
MQESGEPFEHYPLVDAMDHEILMHRDAHFGGLFSVMLDYYKGEGKGIQPDFTIERIERLATLEAEMKENLAALFFTASEA
QKVADARAAYQNLRSIYEIQNQQNRFPRLIADLILSEDEEAEKEVNAIVAEKDKIVPLLIECLGNEQFYDPIFPGYGLLP
SLIVKCLGKIGDKRAIISLFEALGQGDFFADEQILRALKAIGDPAKAFLLKVVCGKPLNEDNERAAIGLLAFKENPEVAN
TCFNLLKNEDIQKRPCLSTYLALACIGLQDEHLRQEFRQMVTQPQLNAMLKEDMKGILHSWDHLDQ
>Mature_306_residues
MQESGEPFEHYPLVDAMDHEILMHRDAHFGGLFSVMLDYYKGEGKGIQPDFTIERIERLATLEAEMKENLAALFFTASEA
QKVADARAAYQNLRSIYEIQNQQNRFPRLIADLILSEDEEAEKEVNAIVAEKDKIVPLLIECLGNEQFYDPIFPGYGLLP
SLIVKCLGKIGDKRAIISLFEALGQGDFFADEQILRALKAIGDPAKAFLLKVVCGKPLNEDNERAAIGLLAFKENPEVAN
TCFNLLKNEDIQKRPCLSTYLALACIGLQDEHLRQEFRQMVTQPQLNAMLKEDMKGILHSWDHLDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34601; Mature: 34601

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESGEPFEHYPLVDAMDHEILMHRDAHFGGLFSVMLDYYKGEGKGIQPDFTIERIERLA
CCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TLEAEMKENLAALFFTASEAQKVADARAAYQNLRSIYEIQNQQNRFPRLIADLILSEDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AEKEVNAIVAEKDKIVPLLIECLGNEQFYDPIFPGYGLLPSLIVKCLGKIGDKRAIISLF
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
EALGQGDFFADEQILRALKAIGDPAKAFLLKVVCGKPLNEDNERAAIGLLAFKENPEVAN
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCCHHH
TCFNLLKNEDIQKRPCLSTYLALACIGLQDEHLRQEFRQMVTQPQLNAMLKEDMKGILHS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
WDHLDQ
HHHCCC
>Mature Secondary Structure
MQESGEPFEHYPLVDAMDHEILMHRDAHFGGLFSVMLDYYKGEGKGIQPDFTIERIERLA
CCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TLEAEMKENLAALFFTASEAQKVADARAAYQNLRSIYEIQNQQNRFPRLIADLILSEDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AEKEVNAIVAEKDKIVPLLIECLGNEQFYDPIFPGYGLLPSLIVKCLGKIGDKRAIISLF
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
EALGQGDFFADEQILRALKAIGDPAKAFLLKVVCGKPLNEDNERAAIGLLAFKENPEVAN
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCCHHH
TCFNLLKNEDIQKRPCLSTYLALACIGLQDEHLRQEFRQMVTQPQLNAMLKEDMKGILHS
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
WDHLDQ
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA