| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445778
Identifier: 46445778
GI number: 46445778
Start: 219175
End: 219570
Strand: Direct
Name: 46445778
Synonym: pc0144
Alternate gene names: NA
Gene position: 219175-219570 (Clockwise)
Preceding gene: 46445777
Following gene: 46445780
Centisome position: 9.08
GC content: 35.35
Gene sequence:
>396_bases TTGATGGATACAATTTATACAATCGTTTTATTTGGAGAGGCTGAACGCGGAGAGTTTCGCACGGCTTATCTTTGTCAAGG ATTAGAAGATTTAGATAAATATCTGGGAAATCCACCTTATCAAAGTAAAGGGTTATATTGCGCTGTGCAAGCACTTCTTT TTAAACGTCGCCTCATTTATTTTCGCGTTTCGGAAGAGGGGTTTAGTATAAATGATTATCTCATTGGCTTGAAAATGTTA GAGCAGCAAACTTTCATTCCTAATTTGGATGCGATTTATATGCCTGGAATAGGAAATCAGGAGGTGTTAGATGCGGTGCA ACCAATTTGTAAATTTTATCATAGTATTTTGTTGACTAATGAAGCCGATTTCTATGACTATCTTTATTATAAGTAA
Upstream 100 bases:
>100_bases CCGAATTGCTAAGTACAATCGGTTATTAGCTATTGAGGCAGAATTAGAATCGACAGCGCTTTATCAAGATAGTAATCGAT TTCAGATTTTCTAAGGTAAA
Downstream 100 bases:
>100_bases GTCGATGTAGATAGCCTACATCGACGACTGATTGAGAATTAACGACGATCGTTAAGTTTAGCAAGCAAACGTAACATTTC AATATAAAGCCAAACAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMDTIYTIVLFGEAERGEFRTAYLCQGLEDLDKYLGNPPYQSKGLYCAVQALLFKRRLIYFRVSEEGFSINDYLIGLKML EQQTFIPNLDAIYMPGIGNQEVLDAVQPICKFYHSILLTNEADFYDYLYYK
Sequences:
>Translated_131_residues MMDTIYTIVLFGEAERGEFRTAYLCQGLEDLDKYLGNPPYQSKGLYCAVQALLFKRRLIYFRVSEEGFSINDYLIGLKML EQQTFIPNLDAIYMPGIGNQEVLDAVQPICKFYHSILLTNEADFYDYLYYK >Mature_131_residues MMDTIYTIVLFGEAERGEFRTAYLCQGLEDLDKYLGNPPYQSKGLYCAVQALLFKRRLIYFRVSEEGFSINDYLIGLKML EQQTFIPNLDAIYMPGIGNQEVLDAVQPICKFYHSILLTNEADFYDYLYYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15290; Mature: 15290
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTIYTIVLFGEAERGEFRTAYLCQGLEDLDKYLGNPPYQSKGLYCAVQALLFKRRLIY CCCCEEEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEE FRVSEEGFSINDYLIGLKMLEQQTFIPNLDAIYMPGIGNQEVLDAVQPICKFYHSILLTN EEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC EADFYDYLYYK CCCHHHEEECC >Mature Secondary Structure MMDTIYTIVLFGEAERGEFRTAYLCQGLEDLDKYLGNPPYQSKGLYCAVQALLFKRRLIY CCCCEEEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEE FRVSEEGFSINDYLIGLKMLEQQTFIPNLDAIYMPGIGNQEVLDAVQPICKFYHSILLTN EEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC EADFYDYLYYK CCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA