| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445755
Identifier: 46445755
GI number: 46445755
Start: 190212
End: 192869
Strand: Reverse
Name: 46445755
Synonym: pc0121
Alternate gene names: NA
Gene position: 192869-190212 (Counterclockwise)
Preceding gene: 46445761
Following gene: 46445753
Centisome position: 7.99
GC content: 38.0
Gene sequence:
>2658_bases TTGCTTCAGATATTTATGACTTCATCTCCAGAACACCAACGTTTACTAGAGCATCATCAACGTCATTCGAATTGGAAAAA ATGGGGGCCTTACTTAAGTGATCGTGCTTGGGGAACTGTGCGTGAAGATTATAGTGAAACCGGAAATGCGTGGAATTATT TCCCTCATGACCATGCTAGAATGCGAGCCTACCGTTGGAATGAAGATGGAATTGGAGGAATTTCGGATCGGCATCAATAC GTTTGTTTTGCAGTTGCTTTGTGGAATGGAAAAGATCCGATTATTAAAGAACGTTTTTTTGGCTTAAATCCTCAAGAAGG CAATCATGGTGAAGATGTCAAAGAGTATTATTTTTACCTAGATAATACTCCGACTCATAGTTATATGAAAATGCTCTATA AATATCCACATCAAGCTTACCCGTACGAACAGCTTATTCAAGAAAATCAAAGGCGCTCTTCTCGTGATCCCGAATATGAA CTAATCGATACAGGCATCTTTCAAGATAAATGCTATTTCGATGTCCAGATAGAATATGCAAAAGCAGGGCATGAAGATAT TCTTATTCGTCTATCGATTACTAATCAAGCGTCTGAAGCTGCTCCTCTTTACTTATTACCGACTGTTTGGTTTCGAAATA CGTGGAGTTGGGGATACCCCGAAGGTCCCATGGAAGATATACCGACGAAGCCTTTTTTATTTCAAGAACAAGAAGGCAAT CGTTCGTTTATTAAAATCGAACATCCTGCTTTACGCACCTATTATCTTTATGCTCAAGACAATCCCGATTGGATTTTCAC AGAAAATGATACAAACTTTGAACGTTTAATGGGAAAACCCAATCCAACACCTTATGTGAAAGATGCTTTTGACCGTTATT TAGTCCATCAAGACAAAACAGCAGTAAATCCTGCTAAAAAAGGTTCCAAAGGCGCTGCATTATATAAATCGATCCTCCCT GCCAAACATACAGAAATTTTTCACCTCCGTTTATGTAAAAATTTCCTTAAACACCCATTTGAAGGATTTAATGAGATCTT TTCATTAAGAAAACATGAAGCGGATCTTTTTTATGAACAAGTTCAAAATCAAGCCTTAGATAAAGATGCAAAAAATTTAC AAAGACAGGCCTTTGCGGGACTTTTATGGTCCAAGCAACTCTATTATTATGATATTGAACAATGGTTAAGAGGAGATAAG CAAATTCCTCTGGAGCGTCAAAATGACCGTAATCAAGGTTGGATTCATCTTGTCAACTTTGATGTTATTTCAATGCCCGA CAAATGGGAATATCCGTGGTATGCCAGTTGGGATCTTGGATTTCATTGTATCTCACTGGTATTGATTGATCCAGACTTTG CCAAACGTCAGCTTATTCTTATGACAAGAGAATGGTATATGCATCCGAATGGTCAACTTCCCGCTTACGAATGGAACTTT AGCGATGTCAATCCTCCCGTTCTCGCTTGGGCAGCCTGGAGGATTTATAAAATTGACGGGAAACAAACAGGAAAACCTGA TCGAAATTTTCTAGAAGCCATTTTTCATAAACTTTTGCTTAATTTTACCTGGTGGGTTAATCAAAAAGATGAAAAAGGAA ATAATGTTTTTCAAGGAGGCTTTCTAGGTTTAGATAACATCAGTATTTTTGACAGAAGCTCCCCTCTTAATGATGCTCGC ATTGATCAAGCGGATGGAACAGCTTGGATGAGTTTTTACTGCATTTTAATGATGAAAATTTCTATCGAGCTGGCCAGAAC AAATCCCGTTTATCAAGATTCTGCCACAAAGTTTTTTGAACACTTCTTACGTATCGCCAGTGCCATGATCAAACCCGAGC AAAAGGGATATTCGCTATGGTGTAATGAAGATGGTTTTTTCTATGATGCTCTTCACACAAGTAATGATGTCATTCCTTTG CGTATTCGATCATTAGTTGGTTTATTACCCATTTTAGCTGTTGAAACGATTGACCGTCGAATTCTGGATGCTTTACCCAT TTACAAACAGCGATTAGAATGGTTCTTGAAAGAAAGGCCGGACTATACAAGTACACTAGCTTCAGTAGAAGAAACGAGTA CAGGAGCGAGACACCTTTTATCTATTTTAGATAAAGAACGTCTTGTTCAAACTCTGGGCTATTTATTTGATGAAAACGAG TTTTTATCGGAATATGGGATTCGCTCTCTTTCTAAATATCATGAAAAGCACCCCTACTCATTAAAAATTTGGAATCAAGA ACACTTTATTAGTTATCATCCCGGAGAGGCAGAATTTCGCCTTATTGCCGGAGGTAACTCCAACTGGAGAGGCCCCATCT GGTTTCCTATTAATTATCTTTTAATTGAATCATTACAAAAATTCTATCACTACTATGGAGATTCACTTAAAGTCGAATTT CCGACTGGATCGGGAAATCTCATGAACCTAGGAGAAATTTCTAAACAACTTTCTAATCGCCTTATCTCTTTATTTTTAAA ACGTGCTGATGGAACGCGACCTATCTACCAAAAAAATAGCCCCTTTAATCACGAAGAGGATTGGCAGAATCTTTTTCTCT TTTTTGAATTTTTCCATGGGGATACAGGAGAAGGGCATGGAGCAAATCACCAAACAGGATGGACAGCTCTTATCGCCAAA CTTTTACAACAATGCTAA
Upstream 100 bases:
>100_bases ATAAATAATTTACGCAATGTTGATTTGATAAATTCCAATAAATGTTATGAGTCAAGTAAGACAATATGTACTCAAAAAAA TTTAAATTTAAATTAAGCTT
Downstream 100 bases:
>100_bases ACTTCTACAACAATTGGGTGAAGAAAATTAATGCTATTTTGTCAAACAATTGGCCAAACCTTCTGTTTGATCTCAACTCA CTTAAACAAACATCGTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MLQIFMTSSPEHQRLLEHHQRHSNWKKWGPYLSDRAWGTVREDYSETGNAWNYFPHDHARMRAYRWNEDGIGGISDRHQY VCFAVALWNGKDPIIKERFFGLNPQEGNHGEDVKEYYFYLDNTPTHSYMKMLYKYPHQAYPYEQLIQENQRRSSRDPEYE LIDTGIFQDKCYFDVQIEYAKAGHEDILIRLSITNQASEAAPLYLLPTVWFRNTWSWGYPEGPMEDIPTKPFLFQEQEGN RSFIKIEHPALRTYYLYAQDNPDWIFTENDTNFERLMGKPNPTPYVKDAFDRYLVHQDKTAVNPAKKGSKGAALYKSILP AKHTEIFHLRLCKNFLKHPFEGFNEIFSLRKHEADLFYEQVQNQALDKDAKNLQRQAFAGLLWSKQLYYYDIEQWLRGDK QIPLERQNDRNQGWIHLVNFDVISMPDKWEYPWYASWDLGFHCISLVLIDPDFAKRQLILMTREWYMHPNGQLPAYEWNF SDVNPPVLAWAAWRIYKIDGKQTGKPDRNFLEAIFHKLLLNFTWWVNQKDEKGNNVFQGGFLGLDNISIFDRSSPLNDAR IDQADGTAWMSFYCILMMKISIELARTNPVYQDSATKFFEHFLRIASAMIKPEQKGYSLWCNEDGFFYDALHTSNDVIPL RIRSLVGLLPILAVETIDRRILDALPIYKQRLEWFLKERPDYTSTLASVEETSTGARHLLSILDKERLVQTLGYLFDENE FLSEYGIRSLSKYHEKHPYSLKIWNQEHFISYHPGEAEFRLIAGGNSNWRGPIWFPINYLLIESLQKFYHYYGDSLKVEF PTGSGNLMNLGEISKQLSNRLISLFLKRADGTRPIYQKNSPFNHEEDWQNLFLFFEFFHGDTGEGHGANHQTGWTALIAK LLQQC
Sequences:
>Translated_885_residues MLQIFMTSSPEHQRLLEHHQRHSNWKKWGPYLSDRAWGTVREDYSETGNAWNYFPHDHARMRAYRWNEDGIGGISDRHQY VCFAVALWNGKDPIIKERFFGLNPQEGNHGEDVKEYYFYLDNTPTHSYMKMLYKYPHQAYPYEQLIQENQRRSSRDPEYE LIDTGIFQDKCYFDVQIEYAKAGHEDILIRLSITNQASEAAPLYLLPTVWFRNTWSWGYPEGPMEDIPTKPFLFQEQEGN RSFIKIEHPALRTYYLYAQDNPDWIFTENDTNFERLMGKPNPTPYVKDAFDRYLVHQDKTAVNPAKKGSKGAALYKSILP AKHTEIFHLRLCKNFLKHPFEGFNEIFSLRKHEADLFYEQVQNQALDKDAKNLQRQAFAGLLWSKQLYYYDIEQWLRGDK QIPLERQNDRNQGWIHLVNFDVISMPDKWEYPWYASWDLGFHCISLVLIDPDFAKRQLILMTREWYMHPNGQLPAYEWNF SDVNPPVLAWAAWRIYKIDGKQTGKPDRNFLEAIFHKLLLNFTWWVNQKDEKGNNVFQGGFLGLDNISIFDRSSPLNDAR IDQADGTAWMSFYCILMMKISIELARTNPVYQDSATKFFEHFLRIASAMIKPEQKGYSLWCNEDGFFYDALHTSNDVIPL RIRSLVGLLPILAVETIDRRILDALPIYKQRLEWFLKERPDYTSTLASVEETSTGARHLLSILDKERLVQTLGYLFDENE FLSEYGIRSLSKYHEKHPYSLKIWNQEHFISYHPGEAEFRLIAGGNSNWRGPIWFPINYLLIESLQKFYHYYGDSLKVEF PTGSGNLMNLGEISKQLSNRLISLFLKRADGTRPIYQKNSPFNHEEDWQNLFLFFEFFHGDTGEGHGANHQTGWTALIAK LLQQC >Mature_885_residues MLQIFMTSSPEHQRLLEHHQRHSNWKKWGPYLSDRAWGTVREDYSETGNAWNYFPHDHARMRAYRWNEDGIGGISDRHQY VCFAVALWNGKDPIIKERFFGLNPQEGNHGEDVKEYYFYLDNTPTHSYMKMLYKYPHQAYPYEQLIQENQRRSSRDPEYE LIDTGIFQDKCYFDVQIEYAKAGHEDILIRLSITNQASEAAPLYLLPTVWFRNTWSWGYPEGPMEDIPTKPFLFQEQEGN RSFIKIEHPALRTYYLYAQDNPDWIFTENDTNFERLMGKPNPTPYVKDAFDRYLVHQDKTAVNPAKKGSKGAALYKSILP AKHTEIFHLRLCKNFLKHPFEGFNEIFSLRKHEADLFYEQVQNQALDKDAKNLQRQAFAGLLWSKQLYYYDIEQWLRGDK QIPLERQNDRNQGWIHLVNFDVISMPDKWEYPWYASWDLGFHCISLVLIDPDFAKRQLILMTREWYMHPNGQLPAYEWNF SDVNPPVLAWAAWRIYKIDGKQTGKPDRNFLEAIFHKLLLNFTWWVNQKDEKGNNVFQGGFLGLDNISIFDRSSPLNDAR IDQADGTAWMSFYCILMMKISIELARTNPVYQDSATKFFEHFLRIASAMIKPEQKGYSLWCNEDGFFYDALHTSNDVIPL RIRSLVGLLPILAVETIDRRILDALPIYKQRLEWFLKERPDYTSTLASVEETSTGARHLLSILDKERLVQTLGYLFDENE FLSEYGIRSLSKYHEKHPYSLKIWNQEHFISYHPGEAEFRLIAGGNSNWRGPIWFPINYLLIESLQKFYHYYGDSLKVEF PTGSGNLMNLGEISKQLSNRLISLFLKRADGTRPIYQKNSPFNHEEDWQNLFLFFEFFHGDTGEGHGANHQTGWTALIAK LLQQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323852, Length=938, Percent_Identity=46.2686567164179, Blast_Score=830, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104379; Mature: 104379
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQIFMTSSPEHQRLLEHHQRHSNWKKWGPYLSDRAWGTVREDYSETGNAWNYFPHDHAR CEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH MRAYRWNEDGIGGISDRHQYVCFAVALWNGKDPIIKERFFGLNPQEGNHGEDVKEYYFYL HEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHEEEEE DNTPTHSYMKMLYKYPHQAYPYEQLIQENQRRSSRDPEYELIDTGIFQDKCYFDVQIEYA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEEE KAGHEDILIRLSITNQASEAAPLYLLPTVWFRNTWSWGYPEGPMEDIPTKPFLFQEQEGN CCCCCEEEEEEEECCCCCCCCCEEEECHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCC RSFIKIEHPALRTYYLYAQDNPDWIFTENDTNFERLMGKPNPTPYVKDAFDRYLVHQDKT CCEEEEECCCEEEEEEEEECCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC AVNPAKKGSKGAALYKSILPAKHTEIFHLRLCKNFLKHPFEGFNEIFSLRKHEADLFYEQ CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH VQNQALDKDAKNLQRQAFAGLLWSKQLYYYDIEQWLRGDKQIPLERQNDRNQGWIHLVNF HHHHHHCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEE DVISMPDKWEYPWYASWDLGFHCISLVLIDPDFAKRQLILMTREWYMHPNGQLPAYEWNF EEEECCCCCCCCEEEECCCCCEEEEEEEECCCHHCCEEEEEEEEEEECCCCCCCEEECCC SDVNPPVLAWAAWRIYKIDGKQTGKPDRNFLEAIFHKLLLNFTWWVNQKDEKGNNVFQGG CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECC FLGLDNISIFDRSSPLNDARIDQADGTAWMSFYCILMMKISIELARTNPVYQDSATKFFE CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHH HFLRIASAMIKPEQKGYSLWCNEDGFFYDALHTSNDVIPLRIRSLVGLLPILAVETIDRR HHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH ILDALPIYKQRLEWFLKERPDYTSTLASVEETSTGARHLLSILDKERLVQTLGYLFDENE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH FLSEYGIRSLSKYHEKHPYSLKIWNQEHFISYHPGEAEFRLIAGGNSNWRGPIWFPINYL HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCEEECHHHH LIESLQKFYHYYGDSLKVEFPTGSGNLMNLGEISKQLSNRLISLFLKRADGTRPIYQKNS HHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PFNHEEDWQNLFLFFEFFHGDTGEGHGANHQTGWTALIAKLLQQC CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MLQIFMTSSPEHQRLLEHHQRHSNWKKWGPYLSDRAWGTVREDYSETGNAWNYFPHDHAR CEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH MRAYRWNEDGIGGISDRHQYVCFAVALWNGKDPIIKERFFGLNPQEGNHGEDVKEYYFYL HEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHEEEEE DNTPTHSYMKMLYKYPHQAYPYEQLIQENQRRSSRDPEYELIDTGIFQDKCYFDVQIEYA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEEE KAGHEDILIRLSITNQASEAAPLYLLPTVWFRNTWSWGYPEGPMEDIPTKPFLFQEQEGN CCCCCEEEEEEEECCCCCCCCCEEEECHHHHCCCCCCCCCCCCHHHCCCCCEEEEECCCC RSFIKIEHPALRTYYLYAQDNPDWIFTENDTNFERLMGKPNPTPYVKDAFDRYLVHQDKT CCEEEEECCCEEEEEEEEECCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC AVNPAKKGSKGAALYKSILPAKHTEIFHLRLCKNFLKHPFEGFNEIFSLRKHEADLFYEQ CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH VQNQALDKDAKNLQRQAFAGLLWSKQLYYYDIEQWLRGDKQIPLERQNDRNQGWIHLVNF HHHHHHCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEE DVISMPDKWEYPWYASWDLGFHCISLVLIDPDFAKRQLILMTREWYMHPNGQLPAYEWNF EEEECCCCCCCCEEEECCCCCEEEEEEEECCCHHCCEEEEEEEEEEECCCCCCCEEECCC SDVNPPVLAWAAWRIYKIDGKQTGKPDRNFLEAIFHKLLLNFTWWVNQKDEKGNNVFQGG CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECC FLGLDNISIFDRSSPLNDARIDQADGTAWMSFYCILMMKISIELARTNPVYQDSATKFFE CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHH HFLRIASAMIKPEQKGYSLWCNEDGFFYDALHTSNDVIPLRIRSLVGLLPILAVETIDRR HHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH ILDALPIYKQRLEWFLKERPDYTSTLASVEETSTGARHLLSILDKERLVQTLGYLFDENE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH FLSEYGIRSLSKYHEKHPYSLKIWNQEHFISYHPGEAEFRLIAGGNSNWRGPIWFPINYL HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCEEECHHHH LIESLQKFYHYYGDSLKVEFPTGSGNLMNLGEISKQLSNRLISLFLKRADGTRPIYQKNS HHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PFNHEEDWQNLFLFFEFFHGDTGEGHGANHQTGWTALIAKLLQQC CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA