| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is batA
Identifier: 46445753
GI number: 46445753
Start: 188164
End: 189252
Strand: Reverse
Name: batA
Synonym: pc0119
Alternate gene names: NA
Gene position: 189252-188164 (Counterclockwise)
Preceding gene: 46445755
Following gene: 46445752
Centisome position: 7.84
GC content: 34.25
Gene sequence:
>1089_bases TTGCCATTGACGATTGACTATCTAGCTTTAGTTATCTTAGGAATTTTCCTGTTTATGGCATATTGGCTTCAGCAAAAATG GCAAACTCCTTATCTTCCTTCTTTAGCATTTTCTGATTTAGAATCAATCGATCGTTCTTCTAAACGGCGCCAATTCTCTC ATTTACCCTACAGACTTTATCAATTAACCTTATTTTTTTGGTGCATAGCTTTTATAGATCCTCATTTTTTATTTATTAAA AACGATCCATTAGCACAACCCTCTTTACCAATTCCTACAGAAGGAATTGCGATTTATTTGATCGTCGATCAATCTAGTTC TATGAACGAAAAAATTTCTTCAAACAGTTTTTTTGAAAGAGGAAGGTCTTTTACTAAAATTGATCTACTTAAAGTAATGG CTGGTCAGTTTATTTTACATCGTCCTTCAGATTTAATCGGACTCGTTGCTTTTGCTAGAGTTCCTAAAATCTTATCTCCT CTGACCCTAGATCATGAACTACTTATCAATCAATTAAATGATTTAAAGGCCATCAATTCCATGGAAGAAGATGGAACAGC AATGGGCTATGCGATTTATAAAACAGCTCATTTAATTGTTGCTACAAAACATTTTGCACAAGAATTACAAAAAAAGGGTA AGCCTGCCTACGAAATTAAAAATGCTATTATGGTTGTTTTAACTGATGGGTTCCAAGATCCTAATCGATTGGATTATGGT AATCGATTACGCACAATTGAGCTTGATGAAGCCATTGCTTATGCTAAAAATGCAGGAATTCATCTTTATATTATTAATGT AGATCCAAAGTTTTCCTCCCCACAATTTGCGCCCCATAGGCGACAAATAGAGACTTTAGCAGAATCAACAGGAGGTCAAC TTTATTTAGCCAATCAAGAGAAAGACTTAAAACGTGTATTTGATACTATTGATCGATTAGAAAAAAGTTCACTACCTCTG GATTCATTTAGCTCTTCCCCAGTGATTAAACATCGAGTATCGTTTTATCCTTACTTCATTGCCGCTGGATTAAGTTGTTT GTTCTTAGCTATTTTTTTAGAGAGTACTTGGTTGAGAAAATTTCCATGA
Upstream 100 bases:
>100_bases GTAAGAATGGCTCCTTATTCTTATACTTTATATAAAAAACAAATAGACTCGAGAAAAAAGAACAGATATAAAAAAAACAA TTTAAAATAAGGAGGAATCT
Downstream 100 bases:
>100_bases ATATACAAATTTTGAATAAAAAAAATGAAGATCATGTGGCATTTTTTTTTATTTCAAAACGAAATTTTGTAAAGTTTCAG TGTTTATTCAAAATTTGTGT
Product: putative batA protein
Products: NA
Alternate protein names: BatA Protein; Von Willebrand Factor Type A Domain Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; Aerotolerance-Like Membrane Protein
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MPLTIDYLALVILGIFLFMAYWLQQKWQTPYLPSLAFSDLESIDRSSKRRQFSHLPYRLYQLTLFFWCIAFIDPHFLFIK NDPLAQPSLPIPTEGIAIYLIVDQSSSMNEKISSNSFFERGRSFTKIDLLKVMAGQFILHRPSDLIGLVAFARVPKILSP LTLDHELLINQLNDLKAINSMEEDGTAMGYAIYKTAHLIVATKHFAQELQKKGKPAYEIKNAIMVVLTDGFQDPNRLDYG NRLRTIELDEAIAYAKNAGIHLYIINVDPKFSSPQFAPHRRQIETLAESTGGQLYLANQEKDLKRVFDTIDRLEKSSLPL DSFSSSPVIKHRVSFYPYFIAAGLSCLFLAIFLESTWLRKFP
Sequences:
>Translated_362_residues MPLTIDYLALVILGIFLFMAYWLQQKWQTPYLPSLAFSDLESIDRSSKRRQFSHLPYRLYQLTLFFWCIAFIDPHFLFIK NDPLAQPSLPIPTEGIAIYLIVDQSSSMNEKISSNSFFERGRSFTKIDLLKVMAGQFILHRPSDLIGLVAFARVPKILSP LTLDHELLINQLNDLKAINSMEEDGTAMGYAIYKTAHLIVATKHFAQELQKKGKPAYEIKNAIMVVLTDGFQDPNRLDYG NRLRTIELDEAIAYAKNAGIHLYIINVDPKFSSPQFAPHRRQIETLAESTGGQLYLANQEKDLKRVFDTIDRLEKSSLPL DSFSSSPVIKHRVSFYPYFIAAGLSCLFLAIFLESTWLRKFP >Mature_361_residues PLTIDYLALVILGIFLFMAYWLQQKWQTPYLPSLAFSDLESIDRSSKRRQFSHLPYRLYQLTLFFWCIAFIDPHFLFIKN DPLAQPSLPIPTEGIAIYLIVDQSSSMNEKISSNSFFERGRSFTKIDLLKVMAGQFILHRPSDLIGLVAFARVPKILSPL TLDHELLINQLNDLKAINSMEEDGTAMGYAIYKTAHLIVATKHFAQELQKKGKPAYEIKNAIMVVLTDGFQDPNRLDYGN RLRTIELDEAIAYAKNAGIHLYIINVDPKFSSPQFAPHRRQIETLAESTGGQLYLANQEKDLKRVFDTIDRLEKSSLPLD SFSSSPVIKHRVSFYPYFIAAGLSCLFLAIFLESTWLRKFP
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41425; Mature: 41293
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTIDYLALVILGIFLFMAYWLQQKWQTPYLPSLAFSDLESIDRSSKRRQFSHLPYRLY CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH QLTLFFWCIAFIDPHFLFIKNDPLAQPSLPIPTEGIAIYLIVDQSSSMNEKISSNSFFER HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCHHHHH GRSFTKIDLLKVMAGQFILHRPSDLIGLVAFARVPKILSPLTLDHELLINQLNDLKAINS CCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC MEEDGTAMGYAIYKTAHLIVATKHFAQELQKKGKPAYEIKNAIMVVLTDGFQDPNRLDYG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCCCCCC NRLRTIELDEAIAYAKNAGIHLYIINVDPKFSSPQFAPHRRQIETLAESTGGQLYLANQE CCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCH KDLKRVFDTIDRLEKSSLPLDSFSSSPVIKHRVSFYPYFIAAGLSCLFLAIFLESTWLRK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FP CC >Mature Secondary Structure PLTIDYLALVILGIFLFMAYWLQQKWQTPYLPSLAFSDLESIDRSSKRRQFSHLPYRLY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH QLTLFFWCIAFIDPHFLFIKNDPLAQPSLPIPTEGIAIYLIVDQSSSMNEKISSNSFFER HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCHHHHH GRSFTKIDLLKVMAGQFILHRPSDLIGLVAFARVPKILSPLTLDHELLINQLNDLKAINS CCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC MEEDGTAMGYAIYKTAHLIVATKHFAQELQKKGKPAYEIKNAIMVVLTDGFQDPNRLDYG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCCCCCC NRLRTIELDEAIAYAKNAGIHLYIINVDPKFSSPQFAPHRRQIETLAESTGGQLYLANQE CCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCH KDLKRVFDTIDRLEKSSLPLDSFSSSPVIKHRVSFYPYFIAAGLSCLFLAIFLESTWLRK HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA