| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445744
Identifier: 46445744
GI number: 46445744
Start: 177439
End: 178206
Strand: Direct
Name: 46445744
Synonym: pc0110
Alternate gene names: NA
Gene position: 177439-178206 (Clockwise)
Preceding gene: 46445743
Following gene: 46445754
Centisome position: 7.35
GC content: 36.07
Gene sequence:
>768_bases ATGTTCTCAATTTGGGCAATTGCTGACCTTCATCTTCCTTTTGGTGCCCCTAATAAACACATGAGGATCTTTGGCCCACA ATGGGAAGAATATACTGACAAAATTAAACAATCTTGGCTTGAATTGGTTGCTGAAAATGATTTGGTTTTAATTCCAGGTG ATATTTCTTGGGCTATGCGCTTAGAAGAAGCTCGGTTGGACCTTGATTGGATTGGTCAGCTTCCAGGGACAAAAGTATTG CTTAAAGGAAATCATGACTATTGGTGGGGATCATTATCCAAGATTCAGTCGATTTTGCCCCCTTCTTGTCATTTGATTCA AAATAATAGTTTTTTTTGGAATGGGGTAAATATTGCAGGAGCTCGCCTTTGGGACATTCCAGGAATCAGTTTTAATGAGT GGATTGATTTTAAGGATTTTGCGTGTATCAAAAAAATTAATGACGAAGATCATTCAGAGGAAAGTCAAAAAATCTATGAA CGCGAATTAAAGCGACTGGAAACAAGCTTGAAAACGATGCATTCTCAAGCAAAGTTGCGTATTGCCATGACTCATTATCC TCCTATTGGAGCGAATTTAGAAGAAACAGAGGTAAGTCGTTTATTAGAAAAATATCACATTAATATTTGTGTATTTGGGC ATTTACACAATGTTAAAGCTGACCGTGAAATTTTTGGTATGCATAACAATATCCGTTATCAGTTAGTTGCTTGTGATTAT CTTCACCAATTTAAACCTATTAAAATAGCAGATCTTTCTCCTTTTTAA
Upstream 100 bases:
>100_bases ATCAGTCCTTCCAGACGGATTTATTTTATAATTAATATTATCTATTTCATCACTCACCGAACGTATTTTTTAAGTGAGTG ATTAATTTTTTTAGGTTAAT
Downstream 100 bases:
>100_bases CTATTTCAGTTTTAAAAACGTATCTGACCATTGGCAAAAAAATCGACCTTCGGTTTGACCAAAAAAATTAACTTGAAGTA AGCGATTTTTTTCACATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase; Phoshohydrolase; Phosphohydrolase Metallophosphoesterase; Ser/Thr Phosphatase Family Protein; Ser/Thr Protein Phosphatase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MFSIWAIADLHLPFGAPNKHMRIFGPQWEEYTDKIKQSWLELVAENDLVLIPGDISWAMRLEEARLDLDWIGQLPGTKVL LKGNHDYWWGSLSKIQSILPPSCHLIQNNSFFWNGVNIAGARLWDIPGISFNEWIDFKDFACIKKINDEDHSEESQKIYE RELKRLETSLKTMHSQAKLRIAMTHYPPIGANLEETEVSRLLEKYHINICVFGHLHNVKADREIFGMHNNIRYQLVACDY LHQFKPIKIADLSPF
Sequences:
>Translated_255_residues MFSIWAIADLHLPFGAPNKHMRIFGPQWEEYTDKIKQSWLELVAENDLVLIPGDISWAMRLEEARLDLDWIGQLPGTKVL LKGNHDYWWGSLSKIQSILPPSCHLIQNNSFFWNGVNIAGARLWDIPGISFNEWIDFKDFACIKKINDEDHSEESQKIYE RELKRLETSLKTMHSQAKLRIAMTHYPPIGANLEETEVSRLLEKYHINICVFGHLHNVKADREIFGMHNNIRYQLVACDY LHQFKPIKIADLSPF >Mature_255_residues MFSIWAIADLHLPFGAPNKHMRIFGPQWEEYTDKIKQSWLELVAENDLVLIPGDISWAMRLEEARLDLDWIGQLPGTKVL LKGNHDYWWGSLSKIQSILPPSCHLIQNNSFFWNGVNIAGARLWDIPGISFNEWIDFKDFACIKKINDEDHSEESQKIYE RELKRLETSLKTMHSQAKLRIAMTHYPPIGANLEETEVSRLLEKYHINICVFGHLHNVKADREIFGMHNNIRYQLVACDY LHQFKPIKIADLSPF
Specific function: Unknown
COG id: COG1768
COG function: function code R; Predicted phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29739; Mature: 29739
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIWAIADLHLPFGAPNKHMRIFGPQWEEYTDKIKQSWLELVAENDLVLIPGDISWAMR CEEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEE LEEARLDLDWIGQLPGTKVLLKGNHDYWWGSLSKIQSILPPSCHLIQNNSFFWNGVNIAG HHHHHCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCEECC ARLWDIPGISFNEWIDFKDFACIKKINDEDHSEESQKIYERELKRLETSLKTMHSQAKLR EEEEECCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IAMTHYPPIGANLEETEVSRLLEKYHINICVFGHLHNVKADREIFGMHNNIRYQLVACDY EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEHH LHQFKPIKIADLSPF HHCCCCEEEECCCCC >Mature Secondary Structure MFSIWAIADLHLPFGAPNKHMRIFGPQWEEYTDKIKQSWLELVAENDLVLIPGDISWAMR CEEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEE LEEARLDLDWIGQLPGTKVLLKGNHDYWWGSLSKIQSILPPSCHLIQNNSFFWNGVNIAG HHHHHCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCEECC ARLWDIPGISFNEWIDFKDFACIKKINDEDHSEESQKIYERELKRLETSLKTMHSQAKLR EEEEECCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IAMTHYPPIGANLEETEVSRLLEKYHINICVFGHLHNVKADREIFGMHNNIRYQLVACDY EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCEEEEEEEHH LHQFKPIKIADLSPF HHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA