Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445738

Identifier: 46445738

GI number: 46445738

Start: 168921

End: 169613

Strand: Reverse

Name: 46445738

Synonym: pc0104

Alternate gene names: NA

Gene position: 169613-168921 (Counterclockwise)

Preceding gene: 46445739

Following gene: 46445737

Centisome position: 7.02

GC content: 33.62

Gene sequence:

>693_bases
ATGACTTTATTTTTTACTCTTTTTCCCCTTTACTTGTTTGGAAATGTGCATTGTTTAGGAATGTGCGGTCCTTTAGTCCT
GTTACTTGGAAAACATCATCATCGATATTTTTACTTCATAGGTAGAATCCTTTCTTTTAGTTTAGCAGGCTTAGTTGCAG
GAGAGGCTGGAGCAGTCACTCAAATTTTTCTCAAAGACTACTATTTGGCAGAAATTATAAGTATTTTTTTTGGAGTCTTG
ATTATCTATTGGGGACTAAACTTGTTATTTAATTGGAATTTTTTTAAAAGTATCACGCAATGGAATTTATTACAGACAAT
CAATTTGACTCTTTCTCAACTGATGTTGAAAAATAATTGGAAAGCGACCTTTTTTTTTGGTTTTTTTACAGTGATGTTAC
CTTGCGGTCAAACCCTCGTTGTTTTTTCAGCTTGTGCTTTAACGGGAGATGCATTCATTGGCCTAGGAAATGGATTTGCC
TTTGCTATTTTAACAACACCTTCGCTTGTTTTGGCTATGCATACTTATAAATTTTTTAACCAACTAAAGCAATATTCCAA
TATTATTTTAGGATTAAGCTCGATTTTCGTCGGAATTTTAGCTTGTTGTAGAGGATTTGCAGAACTGGGGTGGATTTCAC
ATTTTGTCTTAAATCCTGACTCTTCACCCCTTTATCATATAGTGATTTTCTAA

Upstream 100 bases:

>100_bases
CGGGTTTAGACATGGCCCGTATTCAAAAAGTACGCTATGATTCGCTTCAAGATAAACAAACATCTATAAATGATCCTGTT
TTTCTTCATCACGAACAATA

Downstream 100 bases:

>100_bases
TGAATAAAGAGCCTATTAGTTTATATATCTTCCGATTTATCTTAGGGTTTGGGTTATTCGCGTTCATGGCTATGTTGTAT
TGGTCATCTGCTCTGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVL
IIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFA
FAILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF

Sequences:

>Translated_230_residues
MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVL
IIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFA
FAILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF
>Mature_229_residues
TLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVLI
IYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAF
AILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25943; Mature: 25812

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVT
CCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
QIFLKDYYLAEIISIFFGVLIIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAFAILTTPSLVLAMHTYKFFN
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHH
QLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
>Mature Secondary Structure 
TLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVT
CHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
QIFLKDYYLAEIISIFFGVLIIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAFAILTTPSLVLAMHTYKFFN
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHH
QLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA