| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445718
Identifier: 46445718
GI number: 46445718
Start: 143526
End: 144194
Strand: Reverse
Name: 46445718
Synonym: pc0084
Alternate gene names: NA
Gene position: 144194-143526 (Counterclockwise)
Preceding gene: 46445719
Following gene: 46445717
Centisome position: 5.97
GC content: 32.14
Gene sequence:
>669_bases TTGCAAAGTTCTCGAGAGCAATTTATTTTAGATTTAGATAAAAAAATTTCTATACTCAAAATAGATGTTTCAATTGTGTT TGATGGAACTTTTCAAGAAGGAGAAGGAACGCGTTCCCACTTCAATAACGTTGAAATTTTATTCACCGCCCAGGGAGAAA CAGCAGATGAATTTATTTTAGATGCTCTTAAATATTCTTCTCAACCTCAACAAGAAATTATCATTACTTCAGATAAAAAA CTGGCAAAGTTAGCCCGAAATAAACAGGCTCAAACAGAAAGCGTAGAAAATTTTATTCAATGGTTAAATAAAGCTTATAA AAATAAACTAAAGAAACTGACAAATCGCTCTAAATTTTTTAATCCAGTTACTACTCCAAAAACTTCAATTCCTTCTAATC CTTCTAATCCTAAAGTCGATCAAAAAATTGAAGGTTCAACTGATTATTATCAGCAAATTTTTGAAAACGAGTATCAAAAA CTTCTAAAAAAAGAACCGGCATTGGACAAAAAAACGCCTTCAAAATCCAGAAAGCCTAAAGAAAAAGAAGACCCTTTCCC CAAAATTCCACCCCTTGCTATTGATGCTCCAACTCAAATGGAGCGATGGGAAAAAGTTTTCGAAGCAAGATTAAAACATT TTTCATATCAAGACGTCGAAAAATCCTAA
Upstream 100 bases:
>100_bases CGACTCTCTGCATTTTTAGAAAATCTTCGGGATTAAATAAATGCATTATTATATTGATGGATACAATTTCCTTTTTAGAT TAGTTCATGCTTATGAGAAT
Downstream 100 bases:
>100_bases CAACTTTGCGGTAATTCTATGGCGTGTTATGGTAATAATAAATTTGTAAAATCGAACTAAAAGATAATGGAAAAGTTTGA AGATCATTCAATAACCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQSSREQFILDLDKKISILKIDVSIVFDGTFQEGEGTRSHFNNVEILFTAQGETADEFILDALKYSSQPQQEIIITSDKK LAKLARNKQAQTESVENFIQWLNKAYKNKLKKLTNRSKFFNPVTTPKTSIPSNPSNPKVDQKIEGSTDYYQQIFENEYQK LLKKEPALDKKTPSKSRKPKEKEDPFPKIPPLAIDAPTQMERWEKVFEARLKHFSYQDVEKS
Sequences:
>Translated_222_residues MQSSREQFILDLDKKISILKIDVSIVFDGTFQEGEGTRSHFNNVEILFTAQGETADEFILDALKYSSQPQQEIIITSDKK LAKLARNKQAQTESVENFIQWLNKAYKNKLKKLTNRSKFFNPVTTPKTSIPSNPSNPKVDQKIEGSTDYYQQIFENEYQK LLKKEPALDKKTPSKSRKPKEKEDPFPKIPPLAIDAPTQMERWEKVFEARLKHFSYQDVEKS >Mature_222_residues MQSSREQFILDLDKKISILKIDVSIVFDGTFQEGEGTRSHFNNVEILFTAQGETADEFILDALKYSSQPQQEIIITSDKK LAKLARNKQAQTESVENFIQWLNKAYKNKLKKLTNRSKFFNPVTTPKTSIPSNPSNPKVDQKIEGSTDYYQQIFENEYQK LLKKEPALDKKTPSKSRKPKEKEDPFPKIPPLAIDAPTQMERWEKVFEARLKHFSYQDVEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25735; Mature: 25735
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSREQFILDLDKKISILKIDVSIVFDGTFQEGEGTRSHFNNVEILFTAQGETADEFIL CCCCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHH DALKYSSQPQQEIIITSDKKLAKLARNKQAQTESVENFIQWLNKAYKNKLKKLTNRSKFF HHHHHCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NPVTTPKTSIPSNPSNPKVDQKIEGSTDYYQQIFENEYQKLLKKEPALDKKTPSKSRKPK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EKEDPFPKIPPLAIDAPTQMERWEKVFEARLKHFSYQDVEKS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MQSSREQFILDLDKKISILKIDVSIVFDGTFQEGEGTRSHFNNVEILFTAQGETADEFIL CCCCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHH DALKYSSQPQQEIIITSDKKLAKLARNKQAQTESVENFIQWLNKAYKNKLKKLTNRSKFF HHHHHCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NPVTTPKTSIPSNPSNPKVDQKIEGSTDYYQQIFENEYQKLLKKEPALDKKTPSKSRKPK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EKEDPFPKIPPLAIDAPTQMERWEKVFEARLKHFSYQDVEKS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA