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The map label for this gene is gidB

Identifier: 45659303

GI number: 45659303

Start: 4264601

End: 4265365

Strand: Reverse

Name: gidB

Synonym: LIC13490

Alternate gene names: 45659303

Gene position: 4265365-4264601 (Counterclockwise)

Preceding gene: 45659304

Following gene: 45659302

Centisome position: 99.72

GC content: 35.16

Gene sequence:

>765_bases
ATGCAAGATCCGGAACAATTTTCAATTGAGTCAATTTTACAAAGACTAAAAGAAAGATTTCCAACCGAAGCGGACGAAAT
CAGCTCTTTCTTCGATTGGGATTTGGTTCATAAATTCACGGTGTTCTTAAAGGAAAAGAATGAAGCGGGAGGATTTTTTT
CTAAAAGGGATTCAGAAGAAATTTTAGATCGGCATGTTCTCGAATCGATTTATCACGTTTATCGAATTACAAAAAAAATA
GGATCTTGGAAGGGGACGCAGCTTGGAGATGCGGGAACCGGACCAGGAATTCCTGGATTTTTTTTTCGTTGTCTCAAAGA
ACATCCGATTGTCGTTTTAATTGATTCTCAAAAAAGAAAACTTTCACATACTGAAAATTTTGTTCGATCCAATCAAATTG
ATGGCGTAAAATTTCAATTCATCCGAGCCGAGGAATCTAAATTATCTTTAAATTATGTCACATCTCGAGGTTTTATTCCC
TATCCTTATAGTATAGAAGCGATTTGTAATCTTTTAAAGATAAATGGAACTTATGTCCCATTTTTAGGAAAACATGATAT
GGATACAAATTTAGAGAAGAAAGTTCTTTCTTATTCTGGCTTTAAATTGGAATTTTCAGAAGATCTAGTTCCTCTTGAAT
TTTTAGGCATGCGACATATTAAATTCTTGAAAAAGGTTTCTAGCCCAAGGCATGGTTATCCAAGAGCTTGGAAGGAAATT
AGCAAGGAGAGTAAGGGCGCAAATGGGAAAGATCGTATCGATTAG

Upstream 100 bases:

>100_bases
GAGTTCAACCATTTTCAGACGAGCTATGATTTTGCTGTGTCACAAAACAAACAAAAAGAAACTGTGAAGACAAAACAAAT
CAAGATCCAATCTTAGTAAC

Downstream 100 bases:

>100_bases
CAATCAAAAAGGTGGTGTCGGAAAAACGACAACTTCTATCAATCTCGCGGCCAATCTTGCTTCGATTGAAAAAAAAGTTT
TAATTATAGATATGGACCCG

Product: glucose inhibited division protein B

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKI
GSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIP
YPYSIEAICNLLKINGTYVPFLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEI
SKESKGANGKDRID

Sequences:

>Translated_254_residues
MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKI
GSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIP
YPYSIEAICNLLKINGTYVPFLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEI
SKESKGANGKDRID
>Mature_254_residues
MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKI
GSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIP
YPYSIEAICNLLKINGTYVPFLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEI
SKESKGANGKDRID

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_LEPIC (Q72LR3)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_003389.1
- ProteinModelPortal:   Q72LR3
- SMR:   Q72LR3
- GeneID:   2771618
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC13490
- HOGENOM:   HBG530268
- OMA:   KIRINLM
- ProtClustDB:   CLSK575259
- BioCyc:   LINT267671:LIC_13490-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 29393; Mature: 29393

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
ILDRHVLESIYHVYRITKKIGSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHH
LSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIPYPYSIEAICNLLKINGTYVP
HHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEC
FLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEI
CCCCCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SKESKGANGKDRID
HHHHCCCCCCCCCC
>Mature Secondary Structure
MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
ILDRHVLESIYHVYRITKKIGSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHH
LSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIPYPYSIEAICNLLKINGTYVP
HHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEC
FLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEI
CCCCCCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SKESKGANGKDRID
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA