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The map label for this gene is ywmC [H]

Identifier: 45659178

GI number: 45659178

Start: 4117133

End: 4118266

Strand: Direct

Name: ywmC [H]

Synonym: LIC13359

Alternate gene names: 45659178

Gene position: 4117133-4118266 (Clockwise)

Preceding gene: 45659177

Following gene: 45659184

Centisome position: 96.26

GC content: 34.13

Gene sequence:

>1134_bases
ATGATTAAAATACGTTTTAAAATTTTGCCCTCTTTTTTAGACAACATTATCTGCCATAACTTTAAACTTTTAAGTCTGAT
AAAGAAAATCTTACATTTTATGTTTTTACAGAGGCTTTTAAATTTTATCGGATTTACATTTTTTATTTTAGTAACTGGAA
CAAACGTATCTTCAGAAAATCAAACGCCATCCCAATTGTTTATCATAGACGCTTCTGGATCTATGAACGAATATTTAGGG
ATTTATCAAAAAATTCATTTAGCTAAGAAACACGTTAGTCACTATATATCCACTCTTCCTCAAGAAACTGAAATCGGTTT
TTTAGCCTATGGAAATCGGCTGCCAGGATGTTCGTCCTCAAGATTGTATCAGCCTTTAGAAATGGGAAATCGCGATACTT
TTAAAAACCGACTATTTAGTCTAACTCCTTCGGGTGCTACACCTCTCGCAGAATCAATTCGAATCGCAGGAACTTTAATT
TCGCAAAGAAAAAAGGAAACTGAAATTATTTTAGTGACGGACGGTATAGAAAGTTGTTACGGAGATCCTAAAAAAGAACT
TCAAGCACTCAAACAAAAAGGAATCCCATTTCAATTTCATGTCCTCGGTCTCGGGCTCAAAAGTCATGAGGAGTTACAAA
TGAAAATTCTCACAGAGGAAGGAAATGGAAAGTATTTCAGTATCGAGGACGATTCTTCTTTTTATACCGCTCTCGATTCG
CTTAGGAATTCACCCGCTAAAAAAACATCTCAAAAATCGAATGAATTGAGTATAAAACCTAACAGCGATTCAATGATATG
GTTTGAAGAAATTCACAAAAACCAAGAATCAGATTCGAGAGTAGAATATACGATCAACTTCGGCTTTAAAACCAAAAACA
ATCCAAATAATTGTGTAATATTCAATTTAAAACAAAGAAAGAATTCTTCCTATCAAAGCCTAGGTCCAAAAAGAATTTCT
TCCCCAGAAACTTTGATTCTGAATCAGAGCGCGTGTTTTGACGTTTCCGAAAGTAAAGGAACAATTACGATCGAAATTCC
AAAACAAAACTCTCTTATCGGAGTTTTAGAACTTTGGGATATGACGGAAATTCCTTCTCCTATTGGAATTTCAAGAGAAG
AAGATATACGTTAG

Upstream 100 bases:

>100_bases
CTAATATATACATCAGTAAAAACTTACAAAATAATTATCCCTGAGCATAAATAAATTCTTTAATATAAAACTTTTCAAAA
TTTAGGTTCGACCCACTTTT

Downstream 100 bases:

>100_bases
ACGTCACATATTCAAGTCAAATTCCGCTGGAAAACTTACTTTGTACTTAAGTTTAATTTCTTGTTTTTGATTCGGTTTTA
AATCTAATTTCCATTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MIKIRFKILPSFLDNIICHNFKLLSLIKKILHFMFLQRLLNFIGFTFFILVTGTNVSSENQTPSQLFIIDASGSMNEYLG
IYQKIHLAKKHVSHYISTLPQETEIGFLAYGNRLPGCSSSRLYQPLEMGNRDTFKNRLFSLTPSGATPLAESIRIAGTLI
SQRKKETEIILVTDGIESCYGDPKKELQALKQKGIPFQFHVLGLGLKSHEELQMKILTEEGNGKYFSIEDDSSFYTALDS
LRNSPAKKTSQKSNELSIKPNSDSMIWFEEIHKNQESDSRVEYTINFGFKTKNNPNNCVIFNLKQRKNSSYQSLGPKRIS
SPETLILNQSACFDVSESKGTITIEIPKQNSLIGVLELWDMTEIPSPIGISREEDIR

Sequences:

>Translated_377_residues
MIKIRFKILPSFLDNIICHNFKLLSLIKKILHFMFLQRLLNFIGFTFFILVTGTNVSSENQTPSQLFIIDASGSMNEYLG
IYQKIHLAKKHVSHYISTLPQETEIGFLAYGNRLPGCSSSRLYQPLEMGNRDTFKNRLFSLTPSGATPLAESIRIAGTLI
SQRKKETEIILVTDGIESCYGDPKKELQALKQKGIPFQFHVLGLGLKSHEELQMKILTEEGNGKYFSIEDDSSFYTALDS
LRNSPAKKTSQKSNELSIKPNSDSMIWFEEIHKNQESDSRVEYTINFGFKTKNNPNNCVIFNLKQRKNSSYQSLGPKRIS
SPETLILNQSACFDVSESKGTITIEIPKQNSLIGVLELWDMTEIPSPIGISREEDIR
>Mature_377_residues
MIKIRFKILPSFLDNIICHNFKLLSLIKKILHFMFLQRLLNFIGFTFFILVTGTNVSSENQTPSQLFIIDASGSMNEYLG
IYQKIHLAKKHVSHYISTLPQETEIGFLAYGNRLPGCSSSRLYQPLEMGNRDTFKNRLFSLTPSGATPLAESIRIAGTLI
SQRKKETEIILVTDGIESCYGDPKKELQALKQKGIPFQFHVLGLGLKSHEELQMKILTEEGNGKYFSIEDDSSFYTALDS
LRNSPAKKTSQKSNELSIKPNSDSMIWFEEIHKNQESDSRVEYTINFGFKTKNNPNNCVIFNLKQRKNSSYQSLGPKRIS
SPETLILNQSACFDVSESKGTITIEIPKQNSLIGVLELWDMTEIPSPIGISREEDIR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 42751; Mature: 42751

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIRFKILPSFLDNIICHNFKLLSLIKKILHFMFLQRLLNFIGFTFFILVTGTNVSSEN
CEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC
QTPSQLFIIDASGSMNEYLGIYQKIHLAKKHVSHYISTLPQETEIGFLAYGNRLPGCSSS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
RLYQPLEMGNRDTFKNRLFSLTPSGATPLAESIRIAGTLISQRKKETEIILVTDGIESCY
CCCCHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
GDPKKELQALKQKGIPFQFHVLGLGLKSHEELQMKILTEEGNGKYFSIEDDSSFYTALDS
CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHH
LRNSPAKKTSQKSNELSIKPNSDSMIWFEEIHKNQESDSRVEYTINFGFKTKNNPNNCVI
HHCCCCHHHCCCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEEEEECEEECCCCCCEEE
FNLKQRKNSSYQSLGPKRISSPETLILNQSACFDVSESKGTITIEIPKQNSLIGVLELWD
EEEHHCCCCCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEHHH
MTEIPSPIGISREEDIR
HHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKIRFKILPSFLDNIICHNFKLLSLIKKILHFMFLQRLLNFIGFTFFILVTGTNVSSEN
CEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC
QTPSQLFIIDASGSMNEYLGIYQKIHLAKKHVSHYISTLPQETEIGFLAYGNRLPGCSSS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
RLYQPLEMGNRDTFKNRLFSLTPSGATPLAESIRIAGTLISQRKKETEIILVTDGIESCY
CCCCHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHH
GDPKKELQALKQKGIPFQFHVLGLGLKSHEELQMKILTEEGNGKYFSIEDDSSFYTALDS
CCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHH
LRNSPAKKTSQKSNELSIKPNSDSMIWFEEIHKNQESDSRVEYTINFGFKTKNNPNNCVI
HHCCCCHHHCCCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEEEEECEEECCCCCCEEE
FNLKQRKNSSYQSLGPKRISSPETLILNQSACFDVSESKGTITIEIPKQNSLIGVLELWD
EEEHHCCCCCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEHHH
MTEIPSPIGISREEDIR
HHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]