Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 45659001

GI number: 45659001

Start: 3891425

End: 3891862

Strand: Reverse

Name: yjbI [H]

Synonym: LIC13179

Alternate gene names: 45659001

Gene position: 3891862-3891425 (Counterclockwise)

Preceding gene: 45659002

Following gene: 45659000

Centisome position: 90.99

GC content: 39.5

Gene sequence:

>438_bases
ATGTCCTTTTTTATTCCACCTGGTGGCCCTCCGGGACCAATTCCTGGTTTACAATTGGTTTTCGGTTCTGTTGGCGAAAA
TAGTCTTCGTAAACTCGTTTCTGATTTTTATGATCAGATTCCTTCTAGTTCGATCTCTTTTATGTTTCAGGAAAATCTAG
AAGATAGTAAAATTAAATCCGCTGATTTTTTAATTCAGGTAACGGGCGGTCCACCTTTGTATTCTCAAAACTACGGACCA
CCTAAAATGCGTGCCAGACATCTTCTGTTTCCGATCGATGAAAAAGCGAGAAGGGTTTGGCTTTCTTGTTATCGTAAGGT
TTTGGACGATTGGGATGCGGAAGTTTCAGCTAAAGAAGTTCTTTGGATTTTTTTTAAGGACTTCTCTACGTGGATGGTAA
ATCTGGAAAGTAAAACGGAGGAATCTAATGGGATCTAA

Upstream 100 bases:

>100_bases
ATACAGTCGTTCCTTTTAAAAAAGATGTATATTATAAAATTGTAAATGACTTTGAGCCTAAGATCCAAAACTTTTTGCAA
GACATCGGAAATAGATCGTA

Downstream 100 bases:

>100_bases
AAATAATTCGAGGGCAAAAATTTTAGTTCGAGGAAAGGTTCAAGGAGTTGGTTTTAGATATTATATTCTTCAAAGAGCCC
AAGAATGTAGGCTAAGCGGT

Product: putative globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSFFIPPGGPPGPIPGLQLVFGSVGENSLRKLVSDFYDQIPSSSISFMFQENLEDSKIKSADFLIQVTGGPPLYSQNYGP
PKMRARHLLFPIDEKARRVWLSCYRKVLDDWDAEVSAKEVLWIFFKDFSTWMVNLESKTEESNGI

Sequences:

>Translated_145_residues
MSFFIPPGGPPGPIPGLQLVFGSVGENSLRKLVSDFYDQIPSSSISFMFQENLEDSKIKSADFLIQVTGGPPLYSQNYGP
PKMRARHLLFPIDEKARRVWLSCYRKVLDDWDAEVSAKEVLWIFFKDFSTWMVNLESKTEESNGI
>Mature_144_residues
SFFIPPGGPPGPIPGLQLVFGSVGENSLRKLVSDFYDQIPSSSISFMFQENLEDSKIKSADFLIQVTGGPPLYSQNYGPP
KMRARHLLFPIDEKARRVWLSCYRKVLDDWDAEVSAKEVLWIFFKDFSTWMVNLESKTEESNGI

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16469; Mature: 16338

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFIPPGGPPGPIPGLQLVFGSVGENSLRKLVSDFYDQIPSSSISFMFQENLEDSKIKS
CCEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
ADFLIQVTGGPPLYSQNYGPPKMRARHLLFPIDEKARRVWLSCYRKVLDDWDAEVSAKEV
CCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LWIFFKDFSTWMVNLESKTEESNGI
HHHHHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
SFFIPPGGPPGPIPGLQLVFGSVGENSLRKLVSDFYDQIPSSSISFMFQENLEDSKIKS
CEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
ADFLIQVTGGPPLYSQNYGPPKMRARHLLFPIDEKARRVWLSCYRKVLDDWDAEVSAKEV
CCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LWIFFKDFSTWMVNLESKTEESNGI
HHHHHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]