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The map label for this gene is 45658925

Identifier: 45658925

GI number: 45658925

Start: 3794701

End: 3795318

Strand: Reverse

Name: 45658925

Synonym: LIC13102

Alternate gene names: NA

Gene position: 3795318-3794701 (Counterclockwise)

Preceding gene: 45658926

Following gene: 45658924

Centisome position: 88.73

GC content: 35.44

Gene sequence:

>618_bases
ATGAAAAGTAGAAAATTAGAATATTCGAATCATATAGAACGTCTTTTAAGTTGTAGAAAATGTCCTAATATGCAAGGGAA
TCCTGTACATGGATGTGTTCCCGTTTCAAAAATTATTAGTTTGGGTCAAGCTCCTGGAATTCACGAAGAAAGGTTTGGTA
GACCGTTTGCTTATACTGCTGGAAAGACCCTTTTTGGTTGGTTCAAAAAAATCGGAATTGAAGAGGAAAACTTTCGAAGT
AAAGTAAATATGTCTGCTGTTTGTAGATGTTTTCCTGGCAAAGCAAAAAGTGGAGATCGTAAACCGGATTCGATAGAAGT
AAAAAACTGTTCTCAATTTCTAGAATTTGAAGTTCGTTTTCATAAACCAGAACTTTTGATTCCGATTGGTAAGCTTGCAA
TTGATCAAGTGTTTGAACTTGGAAAATACAAACTTGAAGACGTGATCGGTAGAAGTTTTTCCCGTAAATTTTATGGAGTT
CAATTAGACTGGATTCCATTACCGCATCCTTCCGGATTGAACGTATGGAATCAAACTGAGACTGGTAAAAAATTAATCCA
AAAAGCATTGGAATTGTTAAAAGACCACCCTGTGATTCGAAAAGAGTTTTTCCGTTGA

Upstream 100 bases:

>100_bases
AAAAAAATTTTAGAGCTTACAAAATTAAAATCCACTATTCGGGTTGTTGATTCTTTGGCGGAGTCGATTAAGATTCTTTT
AAATTAGATTTTTCTATAGA

Downstream 100 bases:

>100_bases
TCCGAATTTGTGGGAGCTCATACAAATTTTATATAAAAAATAAAATTGCATGTAGGAACCTTCTATTTTTTAGAAATCAA
AAGATTCATTGGTATTCTTA

Product: uracil DNA glycosylase

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase; DNA-Directed DNA Polymerase

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKSRKLEYSNHIERLLSCRKCPNMQGNPVHGCVPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFKKIGIEEENFRS
KVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPIGKLAIDQVFELGKYKLEDVIGRSFSRKFYGV
QLDWIPLPHPSGLNVWNQTETGKKLIQKALELLKDHPVIRKEFFR

Sequences:

>Translated_205_residues
MKSRKLEYSNHIERLLSCRKCPNMQGNPVHGCVPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFKKIGIEEENFRS
KVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPIGKLAIDQVFELGKYKLEDVIGRSFSRKFYGV
QLDWIPLPHPSGLNVWNQTETGKKLIQKALELLKDHPVIRKEFFR
>Mature_205_residues
MKSRKLEYSNHIERLLSCRKCPNMQGNPVHGCVPVSKIISLGQAPGIHEERFGRPFAYTAGKTLFGWFKKIGIEEENFRS
KVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRFHKPELLIPIGKLAIDQVFELGKYKLEDVIGRSFSRKFYGV
QLDWIPLPHPSGLNVWNQTETGKKLIQKALELLKDHPVIRKEFFR

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23562; Mature: 23562

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRKLEYSNHIERLLSCRKCPNMQGNPVHGCVPVSKIISLGQAPGIHEERFGRPFAYTA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCEEHHC
GKTLFGWFKKIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRF
CHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEE
HKPELLIPIGKLAIDQVFELGKYKLEDVIGRSFSRKFYGVQLDWIPLPHPSGLNVWNQTE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH
TGKKLIQKALELLKDHPVIRKEFFR
HHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MKSRKLEYSNHIERLLSCRKCPNMQGNPVHGCVPVSKIISLGQAPGIHEERFGRPFAYTA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCEEHHC
GKTLFGWFKKIGIEEENFRSKVNMSAVCRCFPGKAKSGDRKPDSIEVKNCSQFLEFEVRF
CHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEE
HKPELLIPIGKLAIDQVFELGKYKLEDVIGRSFSRKFYGVQLDWIPLPHPSGLNVWNQTE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCH
TGKKLIQKALELLKDHPVIRKEFFR
HHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA