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The map label for this gene is 45658857

Identifier: 45658857

GI number: 45658857

Start: 3693380

End: 3693970

Strand: Reverse

Name: 45658857

Synonym: LIC13030

Alternate gene names: NA

Gene position: 3693970-3693380 (Counterclockwise)

Preceding gene: 45658858

Following gene: 45658855

Centisome position: 86.36

GC content: 35.36

Gene sequence:

>591_bases
ATGCAATTGACTACCGTTTTTTCCGATTTCATTTTAAGTCTTGTATCCATCTTTGTCGCGATTCAAATTAAAAATGAAAC
TTCTTATTCGAAATCTGCGGGTTTTATAGGATTTCTTGCGATAGGAATTTCTGCCGGTTTAGGAACGATTCACTTTTTAG
GAATCGAAGTTTTAGATCCTATTTATCGTTTTGCAGTGGGTTTTGCTTCTTTTGTGGGAGTACCATTGATTGGAACCGGT
TTTTTTCATATTGGAATCAAAAAGTTGAAAAAAAATAATCTCTATCCAGTTGGAGGAGTTTTGTTGTCTTTTTATTTGAT
TTTTGGTTATATCTTTCCACTTCCAATCGTATCTACTGTGTTAGGTGGAATTTCTATGATTACGGCAATTCTTGTTTGTA
TTCGTAAAAATTCTGGAGAAAATAAAGTCCCGGCTTTATATGGGATTTTAGGCGCGATTCTTTTTATTCTTGCGGGGCTT
GTGATTGGAACATCTGGATCTAGGGGACCAGTTTTGAACGTAGACATTTTTCACGTCGTTTTAGCAGTTGCCGTTTATTC
TTTAGGTGCTTCTCTCAAACGATTAAACTAA

Upstream 100 bases:

>100_bases
GTAAAATACTTGGATTTATTTAAACAAATCCAGGCAATACAGTCATTTGTTTTTTGAAAAAGAATTGCAAAAATTGTTTC
TATAATAAAGATCATTTTCC

Downstream 100 bases:

>100_bases
TTTTGTTCCAAAATTTGGGAATTACTAACGTTAGTTTAATGGTGAAAATTTTATTTAAAAACTTATAAAGTCTCAAAAAA
AGTAATCTGTGGAAACTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQLTTVFSDFILSLVSIFVAIQIKNETSYSKSAGFIGFLAIGISAGLGTIHFLGIEVLDPIYRFAVGFASFVGVPLIGTG
FFHIGIKKLKKNNLYPVGGVLLSFYLIFGYIFPLPIVSTVLGGISMITAILVCIRKNSGENKVPALYGILGAILFILAGL
VIGTSGSRGPVLNVDIFHVVLAVAVYSLGASLKRLN

Sequences:

>Translated_196_residues
MQLTTVFSDFILSLVSIFVAIQIKNETSYSKSAGFIGFLAIGISAGLGTIHFLGIEVLDPIYRFAVGFASFVGVPLIGTG
FFHIGIKKLKKNNLYPVGGVLLSFYLIFGYIFPLPIVSTVLGGISMITAILVCIRKNSGENKVPALYGILGAILFILAGL
VIGTSGSRGPVLNVDIFHVVLAVAVYSLGASLKRLN
>Mature_196_residues
MQLTTVFSDFILSLVSIFVAIQIKNETSYSKSAGFIGFLAIGISAGLGTIHFLGIEVLDPIYRFAVGFASFVGVPLIGTG
FFHIGIKKLKKNNLYPVGGVLLSFYLIFGYIFPLPIVSTVLGGISMITAILVCIRKNSGENKVPALYGILGAILFILAGL
VIGTSGSRGPVLNVDIFHVVLAVAVYSLGASLKRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20787; Mature: 20787

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTTVFSDFILSLVSIFVAIQIKNETSYSKSAGFIGFLAIGISAGLGTIHFLGIEVLDP
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
IYRFAVGFASFVGVPLIGTGFFHIGIKKLKKNNLYPVGGVLLSFYLIFGYIFPLPIVSTV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGGISMITAILVCIRKNSGENKVPALYGILGAILFILAGLVIGTSGSRGPVLNVDIFHVV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHH
LAVAVYSLGASLKRLN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLTTVFSDFILSLVSIFVAIQIKNETSYSKSAGFIGFLAIGISAGLGTIHFLGIEVLDP
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
IYRFAVGFASFVGVPLIGTGFFHIGIKKLKKNNLYPVGGVLLSFYLIFGYIFPLPIVSTV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGGISMITAILVCIRKNSGENKVPALYGILGAILFILAGLVIGTSGSRGPVLNVDIFHVV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHH
LAVAVYSLGASLKRLN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA