Click here to switch to the map view.

The map label for this gene is 45658829

Identifier: 45658829

GI number: 45658829

Start: 3650826

End: 3652247

Strand: Direct

Name: 45658829

Synonym: LIC13002

Alternate gene names: NA

Gene position: 3650826-3652247 (Clockwise)

Preceding gene: 45658821

Following gene: 45658831

Centisome position: 85.36

GC content: 39.8

Gene sequence:

>1422_bases
ATGAGAATTCTATTCAATCGAATCCAAAAAAGCACACTTCCAATCTTTATCGGTCTGGGAGTTTTTATTTCTTTTCCATC
CCTCTGGGCAGTTGCAAGTAACAGTAGAAATGCGATTAACGCAAGATACGAAGGTATGGCCGGCGTTAACTTTGCGTTAG
GCGGCTCTCCTATGGACGTTGCACTCAATCCCGCAAATTTATATTTAATGAAAGGAAAAAAAATAGAATTCGGCTTAGGA
ATGTCGCACGCCCAAATAAGACTGAAGGATCAGTTTTTAGATTCGGACCCAAGTTTAAATTATACGAATTCCAAATCTAG
AACCGGAGCAGGTGCAGCTCCATACATGGCAGTTAAACTTCCAGTAACGGATACGATCGACTATGGATTTGCGGCGTATG
TGTTCGGAGTTGTAAATGGGGCCGCGGAAAAAATCAACCGTAATACACCTACAGGAGAAACCGTAAATCAATGGGCGGGT
TTACCTGGTATTTTTGGAGATGGTAAAAGAATCCAAGAGACTACCGAAAATCAGGGAATTTTTATTAAGGCTGTAAATGG
TTTATCTATTAAGTTTGGAAATCTTTCTTTAGGCGCTAGTTTAGAATTAAACTATGGTGCTCAAAATCGCAATATAAGAT
ATTACGACGCCTTTGGAATTCGGGAAATTCCTGGACAGGGATTTCATTACGAAAGCAGAAAGAACGCTCTTGCATTGAGC
GGAATTATAGGTTCCAATTATACGGTTACAGATTGGTTCAGAATTGCATACGTATATCAATCGAGCGCGAACTTTCCGTT
TGATGGTAGTTATACGATCGGGGTCAATGATCCTACCTATTATCGATCTACAGGAGTTTCCTATAATTTCCGTTCGCCGG
AGAAACACGGTCTTGGATTTGCAGTTGGTCCAGAAAATCTAAAAGTAGCGATCGACTTTCTTTACATAAATTATGGTTCC
TACTTAAAAAACGCCCGACAAAATTTAGAAGATCCTTGGTATCCTAATCCTCAAGGACGAAGTTCAGAAACAATTGCACA
TTTGAATTATCGAAATCAATGGGCGGTGTTAATCGGACTCGAACATAAAATTACAAAAGAATGGACCTATCGTTTCGGAT
ATAGTTACAATTCTCCGATTGTTTCCAGTAACGCTTTAAACGGAGCACAAGGGATCTTATTAACTCTCAACCACGTAATT
GCAGGAGGATTTAGTTATTCTTCCGGACCTTGGAGTTTTGACTTTGGAGCAAGTTGTTTTATTCCCGGAAGACAAATCGA
AGGTGGTAAAGATACAGACTGGGCAATAAGTCACGGAATTTTTGGTCCGAACAACCAAAACAATATCGTAGGATATTCTT
ACAGTGCCCAAGCGCTTCATTCGATTGGAATCAATTTTGGTGTAACTCGTTCTTTTGATTAG

Upstream 100 bases:

>100_bases
TTGTTATAATGGATAAAAATTATTCCTATTTGAAATTGGGTCTCTACAAAAGATTCTCCACCGACAAACGAAGAAAATAT
CCGTTTTTTAAAGAGATCTT

Downstream 100 bases:

>100_bases
TCGCGAGAGTTTTTACATCTTTTTCGATGAACTACAACTTTGTGTTAGTTCCCACAAGTTCCGAGTTTTTATTGTAAAAT
CTCGGGCTTGCGGTAGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MRILFNRIQKSTLPIFIGLGVFISFPSLWAVASNSRNAINARYEGMAGVNFALGGSPMDVALNPANLYLMKGKKIEFGLG
MSHAQIRLKDQFLDSDPSLNYTNSKSRTGAGAAPYMAVKLPVTDTIDYGFAAYVFGVVNGAAEKINRNTPTGETVNQWAG
LPGIFGDGKRIQETTENQGIFIKAVNGLSIKFGNLSLGASLELNYGAQNRNIRYYDAFGIREIPGQGFHYESRKNALALS
GIIGSNYTVTDWFRIAYVYQSSANFPFDGSYTIGVNDPTYYRSTGVSYNFRSPEKHGLGFAVGPENLKVAIDFLYINYGS
YLKNARQNLEDPWYPNPQGRSSETIAHLNYRNQWAVLIGLEHKITKEWTYRFGYSYNSPIVSSNALNGAQGILLTLNHVI
AGGFSYSSGPWSFDFGASCFIPGRQIEGGKDTDWAISHGIFGPNNQNNIVGYSYSAQALHSIGINFGVTRSFD

Sequences:

>Translated_473_residues
MRILFNRIQKSTLPIFIGLGVFISFPSLWAVASNSRNAINARYEGMAGVNFALGGSPMDVALNPANLYLMKGKKIEFGLG
MSHAQIRLKDQFLDSDPSLNYTNSKSRTGAGAAPYMAVKLPVTDTIDYGFAAYVFGVVNGAAEKINRNTPTGETVNQWAG
LPGIFGDGKRIQETTENQGIFIKAVNGLSIKFGNLSLGASLELNYGAQNRNIRYYDAFGIREIPGQGFHYESRKNALALS
GIIGSNYTVTDWFRIAYVYQSSANFPFDGSYTIGVNDPTYYRSTGVSYNFRSPEKHGLGFAVGPENLKVAIDFLYINYGS
YLKNARQNLEDPWYPNPQGRSSETIAHLNYRNQWAVLIGLEHKITKEWTYRFGYSYNSPIVSSNALNGAQGILLTLNHVI
AGGFSYSSGPWSFDFGASCFIPGRQIEGGKDTDWAISHGIFGPNNQNNIVGYSYSAQALHSIGINFGVTRSFD
>Mature_473_residues
MRILFNRIQKSTLPIFIGLGVFISFPSLWAVASNSRNAINARYEGMAGVNFALGGSPMDVALNPANLYLMKGKKIEFGLG
MSHAQIRLKDQFLDSDPSLNYTNSKSRTGAGAAPYMAVKLPVTDTIDYGFAAYVFGVVNGAAEKINRNTPTGETVNQWAG
LPGIFGDGKRIQETTENQGIFIKAVNGLSIKFGNLSLGASLELNYGAQNRNIRYYDAFGIREIPGQGFHYESRKNALALS
GIIGSNYTVTDWFRIAYVYQSSANFPFDGSYTIGVNDPTYYRSTGVSYNFRSPEKHGLGFAVGPENLKVAIDFLYINYGS
YLKNARQNLEDPWYPNPQGRSSETIAHLNYRNQWAVLIGLEHKITKEWTYRFGYSYNSPIVSSNALNGAQGILLTLNHVI
AGGFSYSSGPWSFDFGASCFIPGRQIEGGKDTDWAISHGIFGPNNQNNIVGYSYSAQALHSIGINFGVTRSFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51995; Mature: 51995

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFNRIQKSTLPIFIGLGVFISFPSLWAVASNSRNAINARYEGMAGVNFALGGSPMDV
CCHHHHHHHHCCCCEEEECHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCEE
ALNPANLYLMKGKKIEFGLGMSHAQIRLKDQFLDSDPSLNYTNSKSRTGAGAAPYMAVKL
EECCCEEEEEECCEEEECCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE
PVTDTIDYGFAAYVFGVVNGAAEKINRNTPTGETVNQWAGLPGIFGDGKRIQETTENQGI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCE
FIKAVNGLSIKFGNLSLGASLELNYGAQNRNIRYYDAFGIREIPGQGFHYESRKNALALS
EEEEECCCEEEECCEEECEEEEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEE
GIIGSNYTVTDWFRIAYVYQSSANFPFDGSYTIGVNDPTYYRSTGVSYNFRSPEKHGLGF
EEECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEEECCCEEECCCCHHCCCEE
AVGPENLKVAIDFLYINYGSYLKNARQNLEDPWYPNPQGRSSETIAHLNYRNQWAVLIGL
EECCCCEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
EHKITKEWTYRFGYSYNSPIVSSNALNGAQGILLTLNHVIAGGFSYSSGPWSFDFGASCF
CCHHCCEEEEEECCEECCCEEECCCCCCCCEEEEEEEHHHCCCCCCCCCCEEECCCCEEE
IPGRQIEGGKDTDWAISHGIFGPNNQNNIVGYSYSAQALHSIGINFGVTRSFD
ECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MRILFNRIQKSTLPIFIGLGVFISFPSLWAVASNSRNAINARYEGMAGVNFALGGSPMDV
CCHHHHHHHHCCCCEEEECHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCEE
ALNPANLYLMKGKKIEFGLGMSHAQIRLKDQFLDSDPSLNYTNSKSRTGAGAAPYMAVKL
EECCCEEEEEECCEEEECCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE
PVTDTIDYGFAAYVFGVVNGAAEKINRNTPTGETVNQWAGLPGIFGDGKRIQETTENQGI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCE
FIKAVNGLSIKFGNLSLGASLELNYGAQNRNIRYYDAFGIREIPGQGFHYESRKNALALS
EEEEECCCEEEECCEEECEEEEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEE
GIIGSNYTVTDWFRIAYVYQSSANFPFDGSYTIGVNDPTYYRSTGVSYNFRSPEKHGLGF
EEECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEEECCCEEECCCCHHCCCEE
AVGPENLKVAIDFLYINYGSYLKNARQNLEDPWYPNPQGRSSETIAHLNYRNQWAVLIGL
EECCCCEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC
EHKITKEWTYRFGYSYNSPIVSSNALNGAQGILLTLNHVIAGGFSYSSGPWSFDFGASCF
CCHHCCEEEEEECCEECCCEEECCCCCCCCEEEEEEEHHHCCCCCCCCCCEEECCCCEEE
IPGRQIEGGKDTDWAISHGIFGPNNQNNIVGYSYSAQALHSIGINFGVTRSFD
ECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA