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The map label for this gene is cbpA [C]

Identifier: 45658763

GI number: 45658763

Start: 3566355

End: 3567080

Strand: Reverse

Name: cbpA [C]

Synonym: LIC12935

Alternate gene names: 45658763

Gene position: 3567080-3566355 (Counterclockwise)

Preceding gene: 45658764

Following gene: 45658762

Centisome position: 83.4

GC content: 34.57

Gene sequence:

>726_bases
GTGAATGATCCGGGATCTACAACCGATTTTCCGGATCATTATAAAAATCTGGGTCTTTCTCCACTTGCTTCTGTAGAAAA
AGTAAAGTCCCGTTATCGAGAATTAGCTAAAATTTTTCATCCTGATAATCGAGAAACCGGATCTTCAGATCTATTTCAAA
AATTTGCACATTCTTATCAAATACTGACTCATCCTACTCGAAGGAAAGAATACGATCTTCAATATCTTTCCAGACATCCT
GAAATTCTTTTAAAATTTAAGTCTTCGTTGGAAGAAAAAACAGAACAATTTTCTTCGGCAAAAATCAAACAAATTCCAAA
TTCCAGAATCTTATATGCGGGGCAGGCGGTGGATTTGGCTAGAAGAGGGTTACTTCGAGCTGGAATGAGAAATCGTGAGA
GAAAAAAGTATTCTGGGATATATTACGATATTAGAATTCTCTTAATTCCAGAAGAATTAAATTTCCCACTTTCCGCAAAA
ATTCCATTGGTAGTTCGTGTTTTATGTCCTGATTGTAAAGGTTCCAATCTATTTTGTGATTCTTGTGGTGGAAAAGGAAC
CTACAAAAGTTTTCGAAATCTCAATTTAGAAATGGGAGCTGGTAAATTATTACCTGGAAAAATTTATGAGTTGGATCTTT
CCGGATTAAAACTAGAAGGATTTGTCCATTTTAAAAAAAATCGTCTCAAAGTAAAAATTGAACTCCTGGAAGGAGGGAAA
AAATAG

Upstream 100 bases:

>100_bases
AGGAAGTATTAAAAACGCAGCGGAAGACGTGGAAACCACACTTAGAGAAGTGGAAAATGGAGGACCTTATCAGGAGAATC
CAAAGGAATAAGATTTTTTT

Downstream 100 bases:

>100_bases
GTCTTATGCAGAAAGTGATCCGCTTTCATCCGATCTATAAGGAAAGAATTTGGGGCGGTAGAAAATTAGGAGATTTTCCG
GGAAGAAAAATTCCAGAAGG

Product: DnaJ-like protein

Products: NA

Alternate protein names: Chaperone Protein DNAJ

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNDPGSTTDFPDHYKNLGLSPLASVEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPTRRKEYDLQYLSRHP
EILLKFKSSLEEKTEQFSSAKIKQIPNSRILYAGQAVDLARRGLLRAGMRNRERKKYSGIYYDIRILLIPEELNFPLSAK
IPLVVRVLCPDCKGSNLFCDSCGGKGTYKSFRNLNLEMGAGKLLPGKIYELDLSGLKLEGFVHFKKNRLKVKIELLEGGK
K

Sequences:

>Translated_241_residues
MNDPGSTTDFPDHYKNLGLSPLASVEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPTRRKEYDLQYLSRHP
EILLKFKSSLEEKTEQFSSAKIKQIPNSRILYAGQAVDLARRGLLRAGMRNRERKKYSGIYYDIRILLIPEELNFPLSAK
IPLVVRVLCPDCKGSNLFCDSCGGKGTYKSFRNLNLEMGAGKLLPGKIYELDLSGLKLEGFVHFKKNRLKVKIELLEGGK
K
>Mature_241_residues
MNDPGSTTDFPDHYKNLGLSPLASVEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPTRRKEYDLQYLSRHP
EILLKFKSSLEEKTEQFSSAKIKQIPNSRILYAGQAVDLARRGLLRAGMRNRERKKYSGIYYDIRILLIPEELNFPLSAK
IPLVVRVLCPDCKGSNLFCDSCGGKGTYKSFRNLNLEMGAGKLLPGKIYELDLSGLKLEGFVHFKKNRLKVKIELLEGGK
K

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27554; Mature: 27554

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPGSTTDFPDHYKNLGLSPLASVEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQ
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHE
ILTHPTRRKEYDLQYLSRHPEILLKFKSSLEEKTEQFSSAKIKQIPNSRILYAGQAVDLA
EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH
RRGLLRAGMRNRERKKYSGIYYDIRILLIPEELNFPLSAKIPLVVRVLCPDCKGSNLFCD
HHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEE
SCGGKGTYKSFRNLNLEMGAGKLLPGKIYELDLSGLKLEGFVHFKKNRLKVKIELLEGGK
CCCCCCHHHHHHCCCEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEEEEEECCCC
K
C
>Mature Secondary Structure
MNDPGSTTDFPDHYKNLGLSPLASVEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQ
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHE
ILTHPTRRKEYDLQYLSRHPEILLKFKSSLEEKTEQFSSAKIKQIPNSRILYAGQAVDLA
EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH
RRGLLRAGMRNRERKKYSGIYYDIRILLIPEELNFPLSAKIPLVVRVLCPDCKGSNLFCD
HHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEE
SCGGKGTYKSFRNLNLEMGAGKLLPGKIYELDLSGLKLEGFVHFKKNRLKVKIELLEGGK
CCCCCCHHHHHHCCCEECCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEEEEEECCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA