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The map label for this gene is 45658752

Identifier: 45658752

GI number: 45658752

Start: 3548347

End: 3549891

Strand: Direct

Name: 45658752

Synonym: LIC12923

Alternate gene names: NA

Gene position: 3548347-3549891 (Clockwise)

Preceding gene: 45658751

Following gene: 45658753

Centisome position: 82.96

GC content: 34.56

Gene sequence:

>1545_bases
ATGAAATTTCCGATTTCTCACACAGCCGTTTTCTTAAGTCCAAAAACGGAATCTATTTTGAAATCCTTATCTTCAAACGA
AATAAATCACCTACTTTCACTTTCTATTCAAAAACTTTCCAAAGTCCTTCCAAAATCTACCGTTTTTTTTAACTCGTGGC
CATTTGCTATACAACCAAACAATTTTGATTTTTTGAATATTCAAATTTTAAAATATTCTTCCGAGATCGAATTTCTTAAA
AAAGTTTCAGAAAAATTGCCAAAATCCAGAACCGGAGATCCGGATTGGGACGACGCTTCCTTTTTTTATTTTACCGGTTT
GTTTCCCTGTTTAGACGAGAGTTTAAGTCTGGAACTTTATCAAAGACACGATCGTTATCTTTCCCAATATTCTTATAGCG
AAAATTTGCCCCCTGGTATCGTTCCTACAATTTTATCCAGAGAATTCACAAACGCAATTCCAGAATCGATTCAAACGAGC
GCTCAAGATTATCTACTCAAAAACATCAATCACTATGATGTAGAAATTTTTTATCATTCTCCCGACCTAAGACAATATAG
ATTAGATTTCTCTTTAAAAAACAAAAGATCCTTAAATTTAGTCAGGGGATTTTTAAAATCCAAAGAAGAATGGAGCTACT
CCGAAATTCATCCTTGGATCGAAAAAAATCCAGAAGTATTTAGAACCGGACCTTCGTATTTAGAGTTAGAAGTGTTTCGT
GGATGCGATTTAAGTTGCAGTTTTTGTCCTAGACAATTTAATTCCAATGATCAAGACGGAAAATTTTTAAGCCCGGAATT
TCTAGAAAGTCTACTCAGACAACAAGAAGAATCTTTTTCCAATGAATATACCGTTTGTTTCGGAGGTCTAGGCGAACCTC
TTCTCCACCCTAATTTTAAAGAACTAATTCTTACAGCACTTAAGTCGTCATCCCATTTAATGCAGGAATTGATGATAGAA
ACCGCGTTTTATACCGATCCAAATATAATTTTAGATTTTTTGAATATTCTTGATTTCGCACACAAGGAAAAAATCACATG
GATTATCAATCTAACCACCCGCAATCCAGAAAAATATGCAACCCTCTACGGTAAAAATAAACTCGAAAAAGTTCTATCGA
ATATAAAAGAACTCGAAAAAGTTTTTCCTAAAAATAGAATTTATCTTCAATTTTTAAAAATTCAAGAAGCCGAAGACGAA
GTGGAATCTTGGGTGGACGAAACAGAAAAACAAGGTTACGGAGTAATTTTACAAAAATACAATCGATATGCGGGTTTGAT
GCCTGAAAAAAGAGTCACAGATCTAACCCCTATTCAGAGAGAATTTTGTTGGCATCTCAATCGTGACTTATATGTAAACT
CAGATGGGTCCGTATCCATTTGCAAACAAGTTCCCGAAAAAACATTCGGAAATCTTCATAAGGAATCCCTAATAGATATT
TGGCGTAAAGGGCTTCCTGCCTTTAAAGATTCGTTAAATTCTAAACACGAAACTACCGGTGCTCCTTGTATAAACTGTGA
TGAATGGTACACGTTCAACGCATAA

Upstream 100 bases:

>100_bases
AGAAAAGAAAACAAAATTCCTCTCAAAGAAGAGACGTTTCATTTAGATTGATTTTAAATATTACACGATCCGAGTTTTCG
ACCGATATTAATTTCAAACT

Downstream 100 bases:

>100_bases
AGTCTACGCGTTCATCCAAGCCAGAACAGGTTCTTCAAGACTACCTGAAAAGGTCTTATTAGAATTTCCTTCCGGTTCTG
GAAAAACTCTCGTCGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKFPISHTAVFLSPKTESILKSLSSNEINHLLSLSIQKLSKVLPKSTVFFNSWPFAIQPNNFDFLNIQILKYSSEIEFLK
KVSEKLPKSRTGDPDWDDASFFYFTGLFPCLDESLSLELYQRHDRYLSQYSYSENLPPGIVPTILSREFTNAIPESIQTS
AQDYLLKNINHYDVEIFYHSPDLRQYRLDFSLKNKRSLNLVRGFLKSKEEWSYSEIHPWIEKNPEVFRTGPSYLELEVFR
GCDLSCSFCPRQFNSNDQDGKFLSPEFLESLLRQQEESFSNEYTVCFGGLGEPLLHPNFKELILTALKSSSHLMQELMIE
TAFYTDPNIILDFLNILDFAHKEKITWIINLTTRNPEKYATLYGKNKLEKVLSNIKELEKVFPKNRIYLQFLKIQEAEDE
VESWVDETEKQGYGVILQKYNRYAGLMPEKRVTDLTPIQREFCWHLNRDLYVNSDGSVSICKQVPEKTFGNLHKESLIDI
WRKGLPAFKDSLNSKHETTGAPCINCDEWYTFNA

Sequences:

>Translated_514_residues
MKFPISHTAVFLSPKTESILKSLSSNEINHLLSLSIQKLSKVLPKSTVFFNSWPFAIQPNNFDFLNIQILKYSSEIEFLK
KVSEKLPKSRTGDPDWDDASFFYFTGLFPCLDESLSLELYQRHDRYLSQYSYSENLPPGIVPTILSREFTNAIPESIQTS
AQDYLLKNINHYDVEIFYHSPDLRQYRLDFSLKNKRSLNLVRGFLKSKEEWSYSEIHPWIEKNPEVFRTGPSYLELEVFR
GCDLSCSFCPRQFNSNDQDGKFLSPEFLESLLRQQEESFSNEYTVCFGGLGEPLLHPNFKELILTALKSSSHLMQELMIE
TAFYTDPNIILDFLNILDFAHKEKITWIINLTTRNPEKYATLYGKNKLEKVLSNIKELEKVFPKNRIYLQFLKIQEAEDE
VESWVDETEKQGYGVILQKYNRYAGLMPEKRVTDLTPIQREFCWHLNRDLYVNSDGSVSICKQVPEKTFGNLHKESLIDI
WRKGLPAFKDSLNSKHETTGAPCINCDEWYTFNA
>Mature_514_residues
MKFPISHTAVFLSPKTESILKSLSSNEINHLLSLSIQKLSKVLPKSTVFFNSWPFAIQPNNFDFLNIQILKYSSEIEFLK
KVSEKLPKSRTGDPDWDDASFFYFTGLFPCLDESLSLELYQRHDRYLSQYSYSENLPPGIVPTILSREFTNAIPESIQTS
AQDYLLKNINHYDVEIFYHSPDLRQYRLDFSLKNKRSLNLVRGFLKSKEEWSYSEIHPWIEKNPEVFRTGPSYLELEVFR
GCDLSCSFCPRQFNSNDQDGKFLSPEFLESLLRQQEESFSNEYTVCFGGLGEPLLHPNFKELILTALKSSSHLMQELMIE
TAFYTDPNIILDFLNILDFAHKEKITWIINLTTRNPEKYATLYGKNKLEKVLSNIKELEKVFPKNRIYLQFLKIQEAEDE
VESWVDETEKQGYGVILQKYNRYAGLMPEKRVTDLTPIQREFCWHLNRDLYVNSDGSVSICKQVPEKTFGNLHKESLIDI
WRKGLPAFKDSLNSKHETTGAPCINCDEWYTFNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59952; Mature: 59952

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPISHTAVFLSPKTESILKSLSSNEINHLLSLSIQKLSKVLPKSTVFFNSWPFAIQPN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCC
NFDFLNIQILKYSSEIEFLKKVSEKLPKSRTGDPDWDDASFFYFTGLFPCLDESLSLELY
CCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
QRHDRYLSQYSYSENLPPGIVPTILSREFTNAIPESIQTSAQDYLLKNINHYDVEIFYHS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
PDLRQYRLDFSLKNKRSLNLVRGFLKSKEEWSYSEIHPWIEKNPEVFRTGPSYLELEVFR
CCCEEEEECEECCCCCHHHHHHHHHHCCCCCCHHHCCCHHHCCCCEEECCCCEEEEEEEC
GCDLSCSFCPRQFNSNDQDGKFLSPEFLESLLRQQEESFSNEYTVCFGGLGEPLLHPNFK
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
ELILTALKSSSHLMQELMIETAFYTDPNIILDFLNILDFAHKEKITWIINLTTRNPEKYA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
TLYGKNKLEKVLSNIKELEKVFPKNRIYLQFLKIQEAEDEVESWVDETEKQGYGVILQKY
HHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NRYAGLMPEKRVTDLTPIQREFCWHLNRDLYVNSDGSVSICKQVPEKTFGNLHKESLIDI
HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHCHHHHHHHHHHHHHHHH
WRKGLPAFKDSLNSKHETTGAPCINCDEWYTFNA
HHHCCHHHHHHCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MKFPISHTAVFLSPKTESILKSLSSNEINHLLSLSIQKLSKVLPKSTVFFNSWPFAIQPN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCC
NFDFLNIQILKYSSEIEFLKKVSEKLPKSRTGDPDWDDASFFYFTGLFPCLDESLSLELY
CCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
QRHDRYLSQYSYSENLPPGIVPTILSREFTNAIPESIQTSAQDYLLKNINHYDVEIFYHS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
PDLRQYRLDFSLKNKRSLNLVRGFLKSKEEWSYSEIHPWIEKNPEVFRTGPSYLELEVFR
CCCEEEEECEECCCCCHHHHHHHHHHCCCCCCHHHCCCHHHCCCCEEECCCCEEEEEEEC
GCDLSCSFCPRQFNSNDQDGKFLSPEFLESLLRQQEESFSNEYTVCFGGLGEPLLHPNFK
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
ELILTALKSSSHLMQELMIETAFYTDPNIILDFLNILDFAHKEKITWIINLTTRNPEKYA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
TLYGKNKLEKVLSNIKELEKVFPKNRIYLQFLKIQEAEDEVESWVDETEKQGYGVILQKY
HHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NRYAGLMPEKRVTDLTPIQREFCWHLNRDLYVNSDGSVSICKQVPEKTFGNLHKESLIDI
HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHCHHHHHHHHHHHHHHHH
WRKGLPAFKDSLNSKHETTGAPCINCDEWYTFNA
HHHCCHHHHHHCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]