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The map label for this gene is 45658651

Identifier: 45658651

GI number: 45658651

Start: 3424474

End: 3424914

Strand: Reverse

Name: 45658651

Synonym: LIC12821

Alternate gene names: NA

Gene position: 3424914-3424474 (Counterclockwise)

Preceding gene: 45658652

Following gene: 45658650

Centisome position: 80.07

GC content: 39.23

Gene sequence:

>441_bases
ATGGCACTCGTTAAAAATTCATCCGAAGTTACGAACTCCACCATCGGAGAAAATTCCTACTTCAGCGGAAAATTCTTTAT
CAATGGATCTCTTAAGATCGACGGAAAATTTGAAGGAAAATCCTTACAAGCCGAACAACTTTATATCGGTGTTACCGGTA
AGGTAAAAACCAATATCACTGCCGCCAGCGTTATTATTGAAGGAATTGTAATCGGAAATATCACCGCAAGAAATAGAGTA
ATGCTTCTTCCCACCTCTAAAATTCTCGGGGATATTCGTACTCCGGAATTGATCATTCAAAATGGAGTGATCTTAGAAGG
GCGCTGTATGATTTCGAACGATCTCAAACATTCTGCGAAGGATCTGATCGATTTAGAATATTCTAAAGATTCCCTCAGCG
TTGAAAAAATCTTCGGAAAACAATCCGGGGCTAGAGAATAA

Upstream 100 bases:

>100_bases
TTCAAAACAGAGCCTTGAAAAATCCTTTTCCGTTTGGTGGGATCTGTACATTTAGTGATTTAAACTCCCTCCGAAAAGGA
CAAATAGGAAACACAGGCGC

Downstream 100 bases:

>100_bases
TTCGCAAGGTTTTCTTTCCGGAAAAAAATTTTCGGAATCAAAACAGACTTCAAAGAAGTGAACCGGATTCTGATTACAGA
AGGAGATCCTTGTGGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MALVKNSSEVTNSTIGENSYFSGKFFINGSLKIDGKFEGKSLQAEQLYIGVTGKVKTNITAASVIIEGIVIGNITARNRV
MLLPTSKILGDIRTPELIIQNGVILEGRCMISNDLKHSAKDLIDLEYSKDSLSVEKIFGKQSGARE

Sequences:

>Translated_146_residues
MALVKNSSEVTNSTIGENSYFSGKFFINGSLKIDGKFEGKSLQAEQLYIGVTGKVKTNITAASVIIEGIVIGNITARNRV
MLLPTSKILGDIRTPELIIQNGVILEGRCMISNDLKHSAKDLIDLEYSKDSLSVEKIFGKQSGARE
>Mature_145_residues
ALVKNSSEVTNSTIGENSYFSGKFFINGSLKIDGKFEGKSLQAEQLYIGVTGKVKTNITAASVIIEGIVIGNITARNRVM
LLPTSKILGDIRTPELIIQNGVILEGRCMISNDLKHSAKDLIDLEYSKDSLSVEKIFGKQSGARE

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15852; Mature: 15720

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVKNSSEVTNSTIGENSYFSGKFFINGSLKIDGKFEGKSLQAEQLYIGVTGKVKTNIT
CCEECCCCCCCCCCCCCCCEECEEEEEECEEEECCEECCCCEEEEEEEEEECCCEECCCE
AASVIIEGIVIGNITARNRVMLLPTSKILGDIRTPELIIQNGVILEGRCMISNDLKHSAK
EEHEEEEEEEEECCCCCCEEEEEECHHHHCCCCCCEEEEECCEEEECEEEECCCCHHHHH
DLIDLEYSKDSLSVEKIFGKQSGARE
HHEEEEECCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
ALVKNSSEVTNSTIGENSYFSGKFFINGSLKIDGKFEGKSLQAEQLYIGVTGKVKTNIT
CEECCCCCCCCCCCCCCCEECEEEEEECEEEECCEECCCCEEEEEEEEEECCCEECCCE
AASVIIEGIVIGNITARNRVMLLPTSKILGDIRTPELIIQNGVILEGRCMISNDLKHSAK
EEHEEEEEEEEECCCCCCEEEEEECHHHHCCCCCCEEEEECCEEEECEEEECCCCHHHHH
DLIDLEYSKDSLSVEKIFGKQSGARE
HHEEEEECCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA