| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is arnT [H]
Identifier: 45658614
GI number: 45658614
Start: 3387738
End: 3389474
Strand: Reverse
Name: arnT [H]
Synonym: LIC12783
Alternate gene names: 45658614
Gene position: 3389474-3387738 (Counterclockwise)
Preceding gene: 45658615
Following gene: 45658613
Centisome position: 79.25
GC content: 32.93
Gene sequence:
>1737_bases ATGAATCAAATTTCTGTAGATAATAAACAGCCAATCTCCGTTTGGATTCTTTTTATATTTCTGATCGTTTCCGTTTTACC TTTGATACTTACTCTTCCTTTAGATATGATTGATATAGATTCTTCTCAATACGCGGAAATTTCCAGGGAGATGGTAGAAG GAGGAAATCCTTTTTTTATCCGAGATAATGGTAGAAGATATTTAGATAAACCGATTCTTACGTTTTGGAAAATATCACTT TCTTTTTTGATTTTTGGTTATCAAAATTTTGCGTTTCGTCTTCCAGCTCTTTTGTTCACTTTTTTTTCTTTTTGGGGAAT TTTCAAACTTACCGAACTTTATTCCGAAAGTCGTCTTAGGGCTTGGATTTCTGTGTTTTTATACGCACTTTCTCCGGGGC TTTATTCTATGGTAGTGGATCCTAAGATAGACGTTTATCTAACTCCCTATCTCATTTTAGTTCATACCTTTTATTATTTA GGTTTTAAAAGAAATCAAAATTATTATTATCTAATGTACTTTGCCATGGGGTTGGGTTTTATCACAAAAGGGCCGATCGC TATGGTAATTCCAAGTATTTCTATCGGAGGAGATATTTTATTTCGAAGGGATTGGAGGCGACTTTTGGAAATGAAATTAT TTCCAGGGGTTTTACTTGCCATTTTACCTCCACTTTTATGGTCGATTCCACTGTATCTTGAGTTTCAGACTTATGGCCCT TATTTCTTTTTATGGATTCAGTCATTTGGTCGTTTTTATGTAAAGATGTACAATCAGAAATTCAATCCGTTGTTTTTTTA TTCCAATTTTTCTTGGGCTTTCGGAGTTTTTATACTTCCATTTTTTGGGTTTGTATTTGATCGAATTGTGACTTTCTTGA AACAAAACAAAGGTAAAGAAGTATTTCAGAATATACTAAAAAATAAATATTTTAATCTAGATTTTGTTATAGGCTTTTGG TTATTTTTGTTTTTATTTTTGATCAGTTTTTCCAGGTATCAACTTCCTCAATATATCTATTGGTGTTTACCGGCTGCTGC TGTAATTGGTTCGGGGGTTTTGGAATCGATTTTACTTTCTCTCAAAGATCAAAAAAATAAAAGCTGGTTCAATAAGTTAA ATCAAGGTTTGCTTTTAGTTACCGCTGTTGTTTTTTTGATCGCTGTTTTAGTAATTCCTTGGATCAGCGTTGAAGTAGGT TGGAGTTATTTGATTCTTCCTTTGGCTTATTTAGGGGTTTTTCTTTGGGTGTTTTTTAAGTCTTCTACAATTGGAAGATT ACTTGCGTTTTGGATTTTTTCGGCTTCTCTCTTTTTTTCAATTGTGAGTTTATATCTCTATCCTATGTTGACTTCGTTTC AACCTTCTAAGGAAATTGGAATTTGGATTCGTAAATACGAACCTAACAAGGATAAGTTGTTTCTTTTTGGAGTTCCTGCT TCTAAAAGATCGTATGCTTATTATTCTAAAAGAATTTCGAGAACCTTATTTGATCCGGCGGTTTTAATTGATTCGGTTCA AAAAGATGGTCAACGTTATCTGATAGTTCAAGATAAATGGTTGCCTAAGTTAGAAGAGTTTTTTGGCAATAACTTACAGT TTGAGACAGTTAAAGAATTTCCTTCTTACAAGGTAGCGACACCGGAAGGTAAGTTCTTTTTAAAGTCTCATAGAGATCAG ATCGTAGGTAAGGTAATTTTAATGAGAGCCTCTCGAAAAGATTTTCAAAAAAAATGA
Upstream 100 bases:
>100_bases AGGGTTTTGTTCTTCCTTGTTTTGAATCTGAAACCACATGCAAAGGTTTTAATACTTGCGTGATGGAATCCGGATTTATG GATTAATAGAAGGGGTTTTT
Downstream 100 bases:
>100_bases AAGTTTTAAAAAAAAGGTGAGGGGAATTTTAAGGTTTCTCCCGAAAAATGAATTAGGCTAAATTGTGAGCCTGGTTTGGT TTTGGTCCCTGGGTAAAACC
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MNQISVDNKQPISVWILFIFLIVSVLPLILTLPLDMIDIDSSQYAEISREMVEGGNPFFIRDNGRRYLDKPILTFWKISL SFLIFGYQNFAFRLPALLFTFFSFWGIFKLTELYSESRLRAWISVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKRNQNYYYLMYFAMGLGFITKGPIAMVIPSISIGGDILFRRDWRRLLEMKLFPGVLLAILPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGVFILPFFGFVFDRIVTFLKQNKGKEVFQNILKNKYFNLDFVIGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGSGVLESILLSLKDQKNKSWFNKLNQGLLLVTAVVFLIAVLVIPWISVEVG WSYLILPLAYLGVFLWVFFKSSTIGRLLAFWIFSASLFFSIVSLYLYPMLTSFQPSKEIGIWIRKYEPNKDKLFLFGVPA SKRSYAYYSKRISRTLFDPAVLIDSVQKDGQRYLIVQDKWLPKLEEFFGNNLQFETVKEFPSYKVATPEGKFFLKSHRDQ IVGKVILMRASRKDFQKK
Sequences:
>Translated_578_residues MNQISVDNKQPISVWILFIFLIVSVLPLILTLPLDMIDIDSSQYAEISREMVEGGNPFFIRDNGRRYLDKPILTFWKISL SFLIFGYQNFAFRLPALLFTFFSFWGIFKLTELYSESRLRAWISVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKRNQNYYYLMYFAMGLGFITKGPIAMVIPSISIGGDILFRRDWRRLLEMKLFPGVLLAILPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGVFILPFFGFVFDRIVTFLKQNKGKEVFQNILKNKYFNLDFVIGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGSGVLESILLSLKDQKNKSWFNKLNQGLLLVTAVVFLIAVLVIPWISVEVG WSYLILPLAYLGVFLWVFFKSSTIGRLLAFWIFSASLFFSIVSLYLYPMLTSFQPSKEIGIWIRKYEPNKDKLFLFGVPA SKRSYAYYSKRISRTLFDPAVLIDSVQKDGQRYLIVQDKWLPKLEEFFGNNLQFETVKEFPSYKVATPEGKFFLKSHRDQ IVGKVILMRASRKDFQKK >Mature_578_residues MNQISVDNKQPISVWILFIFLIVSVLPLILTLPLDMIDIDSSQYAEISREMVEGGNPFFIRDNGRRYLDKPILTFWKISL SFLIFGYQNFAFRLPALLFTFFSFWGIFKLTELYSESRLRAWISVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKRNQNYYYLMYFAMGLGFITKGPIAMVIPSISIGGDILFRRDWRRLLEMKLFPGVLLAILPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGVFILPFFGFVFDRIVTFLKQNKGKEVFQNILKNKYFNLDFVIGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGSGVLESILLSLKDQKNKSWFNKLNQGLLLVTAVVFLIAVLVIPWISVEVG WSYLILPLAYLGVFLWVFFKSSTIGRLLAFWIFSASLFFSIVSLYLYPMLTSFQPSKEIGIWIRKYEPNKDKLFLFGVPA SKRSYAYYSKRISRTLFDPAVLIDSVQKDGQRYLIVQDKWLPKLEEFFGNNLQFETVKEFPSYKVATPEGKFFLKSHRDQ IVGKVILMRASRKDFQKK
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=415, Percent_Identity=23.855421686747, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 68038; Mature: 68038
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQISVDNKQPISVWILFIFLIVSVLPLILTLPLDMIDIDSSQYAEISREMVEGGNPFFI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCEEEE RDNGRRYLDKPILTFWKISLSFLIFGYQNFAFRLPALLFTFFSFWGIFKLTELYSESRLR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWISVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYLGFKRNQNYYYLMYFAMGLGF HHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCEEECCCEEEEHHHHHHHHH ITKGPIAMVIPSISIGGDILFRRDWRRLLEMKLFPGVLLAILPPLLWSIPLYLEFQTYGP HCCCCCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGVFILPFFGFVFDRIVTFLKQNKGKE CHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VFQNILKNKYFNLDFVIGFWLFLFLFLISFSRYQLPQYIYWCLPAAAVIGSGVLESILLS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LKDQKNKSWFNKLNQGLLLVTAVVFLIAVLVIPWISVEVGWSYLILPLAYLGVFLWVFFK HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SSTIGRLLAFWIFSASLFFSIVSLYLYPMLTSFQPSKEIGIWIRKYEPNKDKLFLFGVPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCC SKRSYAYYSKRISRTLFDPAVLIDSVQKDGQRYLIVQDKWLPKLEEFFGNNLQFETVKEF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEHHHHHC PSYKVATPEGKFFLKSHRDQIVGKVILMRASRKDFQKK CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQISVDNKQPISVWILFIFLIVSVLPLILTLPLDMIDIDSSQYAEISREMVEGGNPFFI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCEEEE RDNGRRYLDKPILTFWKISLSFLIFGYQNFAFRLPALLFTFFSFWGIFKLTELYSESRLR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWISVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYLGFKRNQNYYYLMYFAMGLGF HHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCEEECCCEEEEHHHHHHHHH ITKGPIAMVIPSISIGGDILFRRDWRRLLEMKLFPGVLLAILPPLLWSIPLYLEFQTYGP HCCCCCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGVFILPFFGFVFDRIVTFLKQNKGKE CHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VFQNILKNKYFNLDFVIGFWLFLFLFLISFSRYQLPQYIYWCLPAAAVIGSGVLESILLS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LKDQKNKSWFNKLNQGLLLVTAVVFLIAVLVIPWISVEVGWSYLILPLAYLGVFLWVFFK HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SSTIGRLLAFWIFSASLFFSIVSLYLYPMLTSFQPSKEIGIWIRKYEPNKDKLFLFGVPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCC SKRSYAYYSKRISRTLFDPAVLIDSVQKDGQRYLIVQDKWLPKLEEFFGNNLQFETVKEF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEHHHHHC PSYKVATPEGKFFLKSHRDQIVGKVILMRASRKDFQKK CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA