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The map label for this gene is 45658612

Identifier: 45658612

GI number: 45658612

Start: 3384911

End: 3385825

Strand: Reverse

Name: 45658612

Synonym: LIC12781

Alternate gene names: NA

Gene position: 3385825-3384911 (Counterclockwise)

Preceding gene: 45658613

Following gene: 45658611

Centisome position: 79.16

GC content: 32.68

Gene sequence:

>915_bases
TTGAATCGATCTTCTCAAAAAATCAAAAGAGTATTAGAAAATTTATTTTTAGAATACCAAACATCGGATTATCTCAGATC
TGATCCGGTTGAGTTTCCACATTTGTTCTCTGATTTGAGAGATCGAGAAATTTCCGGTTTTATATCTGCATTGTTTTCTT
ATGGAAACATCACTGCGATTAAGGATCATCTCAAACGGATCTTTGCAATTTGTGGGAATTCTCCTTATCGTTTTCTTTTA
AACGAGGATCTTAAATCGATTCGAAAAAATCTCAAATCGTATCGTTTTCAAAAACCTGAAGATACATATCTTTTTTTGCA
AACAATTCAAAATAAACTTAGGACTACCGAAGGCCATGGACTTGAATCTCTTTTTTCTTTGCCTGAAGAAGGAGAATTTC
AATTCTCTTCAAGAGATCAAAAATCTTTTTTAGAAGGTGGTTCTTTAAGGCGTAGAATTTTATCGTTTCAACTCCGATTT
TTGAAAGAATCTTCAAAAATTGATTCTAAACAAACTAAAAGTTACGGATATAAATTTTTAGTTGGTCAAGGAATCCGATC
TACTTCTTTAAAAAGATATTCTATGTTTTTAAGATGGATGGTTCGAAAAGAATTTCCTGATTTTGGAATCTATTCCTCGA
TTTCGCCTTCAGAATTACAATTTCCTTTGGACGTTCATATTCAAAGAATTGCAAGTGTTTTAAATCTGAGTTCTCGTCGT
AGTTCCGATTGGAAAAAAGCGGAAGAGGTCACCGATTTTTTTCGTGCAATTTTTCCTGACGATCCTGTAAAAGCAGATTT
TGCGTTGAGCCGCTTGGGAATTTTAAAAAAATGTAAATCAAAGTATTTACGAGAACTTTGTGAATCTTGCGGTATCAGAT
CTATTTGTAAAGTTTACGAAGGATTTTCAAAGTAA

Upstream 100 bases:

>100_bases
ATCCAAACCTTTTGTGGGAAGCGTCTTTATTTATGGAAAAGTCTCTTTCGAGAGAATTACAATCTAGAACTTTTTTAGCG
ACTAAAAAGAAAAGAGAGTC

Downstream 100 bases:

>100_bases
TTATTGACTAAAAAAATAAAAGAAGTTTAAAATTTCTGAATATATCCAAACCAAGGAGAATCAAATGCAAAAGATAACGC
CATTTTTGATGTTCGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNRSSQKIKRVLENLFLEYQTSDYLRSDPVEFPHLFSDLRDREISGFISALFSYGNITAIKDHLKRIFAICGNSPYRFLL
NEDLKSIRKNLKSYRFQKPEDTYLFLQTIQNKLRTTEGHGLESLFSLPEEGEFQFSSRDQKSFLEGGSLRRRILSFQLRF
LKESSKIDSKQTKSYGYKFLVGQGIRSTSLKRYSMFLRWMVRKEFPDFGIYSSISPSELQFPLDVHIQRIASVLNLSSRR
SSDWKKAEEVTDFFRAIFPDDPVKADFALSRLGILKKCKSKYLRELCESCGIRSICKVYEGFSK

Sequences:

>Translated_304_residues
MNRSSQKIKRVLENLFLEYQTSDYLRSDPVEFPHLFSDLRDREISGFISALFSYGNITAIKDHLKRIFAICGNSPYRFLL
NEDLKSIRKNLKSYRFQKPEDTYLFLQTIQNKLRTTEGHGLESLFSLPEEGEFQFSSRDQKSFLEGGSLRRRILSFQLRF
LKESSKIDSKQTKSYGYKFLVGQGIRSTSLKRYSMFLRWMVRKEFPDFGIYSSISPSELQFPLDVHIQRIASVLNLSSRR
SSDWKKAEEVTDFFRAIFPDDPVKADFALSRLGILKKCKSKYLRELCESCGIRSICKVYEGFSK
>Mature_304_residues
MNRSSQKIKRVLENLFLEYQTSDYLRSDPVEFPHLFSDLRDREISGFISALFSYGNITAIKDHLKRIFAICGNSPYRFLL
NEDLKSIRKNLKSYRFQKPEDTYLFLQTIQNKLRTTEGHGLESLFSLPEEGEFQFSSRDQKSFLEGGSLRRRILSFQLRF
LKESSKIDSKQTKSYGYKFLVGQGIRSTSLKRYSMFLRWMVRKEFPDFGIYSSISPSELQFPLDVHIQRIASVLNLSSRR
SSDWKKAEEVTDFFRAIFPDDPVKADFALSRLGILKKCKSKYLRELCESCGIRSICKVYEGFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35571; Mature: 35571

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSSQKIKRVLENLFLEYQTSDYLRSDPVEFPHLFSDLRDREISGFISALFSYGNITAI
CCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDHLKRIFAICGNSPYRFLLNEDLKSIRKNLKSYRFQKPEDTYLFLQTIQNKLRTTEGHG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
LESLFSLPEEGEFQFSSRDQKSFLEGGSLRRRILSFQLRFLKESSKIDSKQTKSYGYKFL
HHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEE
VGQGIRSTSLKRYSMFLRWMVRKEFPDFGIYSSISPSELQFPLDVHIQRIASVLNLSSRR
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC
SSDWKKAEEVTDFFRAIFPDDPVKADFALSRLGILKKCKSKYLRELCESCGIRSICKVYE
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GFSK
CCCC
>Mature Secondary Structure
MNRSSQKIKRVLENLFLEYQTSDYLRSDPVEFPHLFSDLRDREISGFISALFSYGNITAI
CCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDHLKRIFAICGNSPYRFLLNEDLKSIRKNLKSYRFQKPEDTYLFLQTIQNKLRTTEGHG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
LESLFSLPEEGEFQFSSRDQKSFLEGGSLRRRILSFQLRFLKESSKIDSKQTKSYGYKFL
HHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEE
VGQGIRSTSLKRYSMFLRWMVRKEFPDFGIYSSISPSELQFPLDVHIQRIASVLNLSSRR
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC
SSDWKKAEEVTDFFRAIFPDDPVKADFALSRLGILKKCKSKYLRELCESCGIRSICKVYE
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GFSK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA