Definition Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence.
Accession NC_005823
Length 4,277,185

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The map label for this gene is hsa

Identifier: 45658592

GI number: 45658592

Start: 3355124

End: 3356104

Strand: Direct

Name: hsa

Synonym: LIC12758

Alternate gene names: NA

Gene position: 3355124-3356104 (Clockwise)

Preceding gene: 45658589

Following gene: 45658594

Centisome position: 78.44

GC content: 33.13

Gene sequence:

>981_bases
TTGACTTTCGGAATTTTGGCTCATCTAATATTCAATAACGAGCCGACTTTCCAAAAAGTGTCACTAAAAATCAAAAAAAT
TCGAATGCTTGCGACGTTTCAAAAATTTTTCCAACTTAAATTCTCCAAGATCCAGAAATCTAAAATTGCAAAATCAGATA
TTTTATTCCAAAACCAAAACAAATCACTTTTTATGAAAGGTGTATCATTTCTTTTCTTATGGATTTCTCTTTTTACAAAC
TTAGATGCAAAGTCAATCCTACTCAAAAACGGTAGGACGATCAATAATGTGAGCGTTAAAACCGTTTCCAACGGTTTTGA
AATTACTCATAAAAGTGGGAAAGTGGAAAAAATCCCTCTCACAGAAGTACAAAAAGTTTTTATTTCTGATCGAGCACCGA
TTCCAGTCAAAAACCAAGAAACAGTAAAAAATCAAGAGACCACAAAAACGAACTCAGTCCCCAATTTAGAAACCGTAAAA
GAAGAAAATATTCCGAAAAATCGAGAAAAAAAATCAGGGATTGGAGTTTTTGCCGAAGGATTAATACCAGGTTGGTCTAG
ATTACTTAGAAATGATTCTTATTACGTAAAAGGATTAGGAGTCTTTTTCGTCTTTGTAGAACTATTCTTTGTCTATAAAA
GTTATATATATTTAAGTCCTGTAAAACAAGCGATTGAAACAAACCAACCGGCTACTCCTTTGGATTTAATCGCTATTACA
TCACAGGATCACAATCTAATGAATATAGCTGCTAGTTATAGCTTAGCTGAAAAATCTGGCCAAGTTGTACTTTCGGATGG
TCAACTGTTAACTAAGGACCGTTATGCTTATGAAAAAGAAGGATTTACTCGTGGTCTTATTTTAATTTTAATTTTAGATG
CGTTTCTAGGATATAAATTTGAAAACTGGGAAATTGTGCCTAACGTAAACGTTTCTTATCGAGATAAGGAAGTTTCAGGC
GGTGTAACCATTCGGTTTTAA

Upstream 100 bases:

>100_bases
GGCAAATTTCTTCTGCCTCTTCTTTGGAAGCCCCTTTACTAAGAAGAAACCGATAAATTTTCTCATAATTTCTAGAATAT
AAACCGTCAAAATCAAAAAT

Downstream 100 bases:

>100_bases
TTTTCCCTTTATAAAGATCCAAGATTAACAATTCTTAAATCAAATTTCTATATCCGATTGATATTTTAATCTACCTTCAT
CAAATTTAGAACTTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTFGILAHLIFNNEPTFQKVSLKIKKIRMLATFQKFFQLKFSKIQKSKIAKSDILFQNQNKSLFMKGVSFLFLWISLFTN
LDAKSILLKNGRTINNVSVKTVSNGFEITHKSGKVEKIPLTEVQKVFISDRAPIPVKNQETVKNQETTKTNSVPNLETVK
EENIPKNREKKSGIGVFAEGLIPGWSRLLRNDSYYVKGLGVFFVFVELFFVYKSYIYLSPVKQAIETNQPATPLDLIAIT
SQDHNLMNIAASYSLAEKSGQVVLSDGQLLTKDRYAYEKEGFTRGLILILILDAFLGYKFENWEIVPNVNVSYRDKEVSG
GVTIRF

Sequences:

>Translated_326_residues
MTFGILAHLIFNNEPTFQKVSLKIKKIRMLATFQKFFQLKFSKIQKSKIAKSDILFQNQNKSLFMKGVSFLFLWISLFTN
LDAKSILLKNGRTINNVSVKTVSNGFEITHKSGKVEKIPLTEVQKVFISDRAPIPVKNQETVKNQETTKTNSVPNLETVK
EENIPKNREKKSGIGVFAEGLIPGWSRLLRNDSYYVKGLGVFFVFVELFFVYKSYIYLSPVKQAIETNQPATPLDLIAIT
SQDHNLMNIAASYSLAEKSGQVVLSDGQLLTKDRYAYEKEGFTRGLILILILDAFLGYKFENWEIVPNVNVSYRDKEVSG
GVTIRF
>Mature_325_residues
TFGILAHLIFNNEPTFQKVSLKIKKIRMLATFQKFFQLKFSKIQKSKIAKSDILFQNQNKSLFMKGVSFLFLWISLFTNL
DAKSILLKNGRTINNVSVKTVSNGFEITHKSGKVEKIPLTEVQKVFISDRAPIPVKNQETVKNQETTKTNSVPNLETVKE
ENIPKNREKKSGIGVFAEGLIPGWSRLLRNDSYYVKGLGVFFVFVELFFVYKSYIYLSPVKQAIETNQPATPLDLIAITS
QDHNLMNIAASYSLAEKSGQVVLSDGQLLTKDRYAYEKEGFTRGLILILILDAFLGYKFENWEIVPNVNVSYRDKEVSGG
VTIRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37061; Mature: 36929

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFGILAHLIFNNEPTFQKVSLKIKKIRMLATFQKFFQLKFSKIQKSKIAKSDILFQNQN
CCHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC
KSLFMKGVSFLFLWISLFTNLDAKSILLKNGRTINNVSVKTVSNGFEITHKSGKVEKIPL
CHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCEECCEEEEEECCCEEEEECCCCEEECCH
TEVQKVFISDRAPIPVKNQETVKNQETTKTNSVPNLETVKEENIPKNREKKSGIGVFAEG
HHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCEEEHH
LIPGWSRLLRNDSYYVKGLGVFFVFVELFFVYKSYIYLSPVKQAIETNQPATPLDLIAIT
CCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
SQDHNLMNIAASYSLAEKSGQVVLSDGQLLTKDRYAYEKEGFTRGLILILILDAFLGYKF
CCCCCEEEHHHHHHHHHCCCCEEEECCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCCEE
ENWEIVPNVNVSYRDKEVSGGVTIRF
CCEEEECCCCCEECCCCCCCCEEEEC
>Mature Secondary Structure 
TFGILAHLIFNNEPTFQKVSLKIKKIRMLATFQKFFQLKFSKIQKSKIAKSDILFQNQN
CHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC
KSLFMKGVSFLFLWISLFTNLDAKSILLKNGRTINNVSVKTVSNGFEITHKSGKVEKIPL
CHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCEECCEEEEEECCCEEEEECCCCEEECCH
TEVQKVFISDRAPIPVKNQETVKNQETTKTNSVPNLETVKEENIPKNREKKSGIGVFAEG
HHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCEEEHH
LIPGWSRLLRNDSYYVKGLGVFFVFVELFFVYKSYIYLSPVKQAIETNQPATPLDLIAIT
CCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
SQDHNLMNIAASYSLAEKSGQVVLSDGQLLTKDRYAYEKEGFTRGLILILILDAFLGYKF
CCCCCEEEHHHHHHHHHCCCCEEEECCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCCEE
ENWEIVPNVNVSYRDKEVSGGVTIRF
CCEEEECCCCCEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA