| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is cysT
Identifier: 45658370
GI number: 45658370
Start: 3064823
End: 3065668
Strand: Reverse
Name: cysT
Synonym: LIC12528
Alternate gene names: 45658370
Gene position: 3065668-3064823 (Counterclockwise)
Preceding gene: 45658371
Following gene: 45658369
Centisome position: 71.67
GC content: 37.71
Gene sequence:
>846_bases TTGAAAAGAGAAAACGTGGCCACTTTTAGGACAAAACCTTACGGAAAAACTGCCTTTGGGATTACATTAGGCGTAACAGT AACTTATCTAAGTTTAATCGTTATCATTCCGTTAGGTGCTCTTTTTCTAAAAAGTACTGGAATTGGCTGGGAAGGTTTTT GGAAGTTACTTACCCACGAAAGGATTTTAGCTGCTCTCTATTTAAGTTTTGGAGCTGGGGCGACTGCGGCAATTCTCAAT TTGTTTATTGGTTTTTTATTTGCTTGGGTATTAGTACGTTATAATTTTCCTGGAAAGTCTTTACTTGATTCTCTAGTAGA TCTTCCGTTTACTTTGCCGACTGCAGTTGCCGGAATTGCTCTTACTACAATTTATACTCCAAACGGAATCATTGGAAAAT TTTTCGAACCATTTGGAATCAAAATTGCATATACTCCAATTGGAATCGTTATTGCTCTCGTGTTTATAGGTTTCCCGTTT GTAGTCAGAACCGTTCAACCGGTTTTAGAAGAGTTTCCTAAAGAATTGGAAGAATCTGCCTATTGTTTAGGAGCAAACCG CTGGCAGATATTTAGAAGAGTAATTTTTCCAGAACTTATCTCTCCTCTGGTTACTGGAGCCGCAATGGCATTTGCAAGAG GAATTGGAGAATACGGTTCTGTAGTGTTTATATCTGGGAACCTTCCCGGTAAAACGGAAATTCTTCCGTTGTTGATCGTC ACAAAATTGGAACAATACGAATACGAAGAAGCGACCGGAATTGCGTTTATTATGCTTGTAATTTCATTTAGTATATTATT ATGTATTAATGTTATTCAGAACATCGCTGCTAGGAAAAGCGAATGA
Upstream 100 bases:
>100_bases CGTAGCTGGTTCTTGGAAAAATGCTCAGGAAAAACATTTTTCTGACGGAGCCATTTTTGATCAGATTACTTCAAAACAAT GAATAAAAAAATTCTTAGAT
Downstream 100 bases:
>100_bases AACAAGAATCGTTAATCGTTAGAAGTTTTCTTATCGGTGTCGTTTTTTTTCTCACCGTTTTGATTTTGATTCTTCCTATT TATACCGTCTTTCAAGAAGC
Product: sulfate ABC transport system permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKRENVATFRTKPYGKTAFGITLGVTVTYLSLIVIIPLGALFLKSTGIGWEGFWKLLTHERILAALYLSFGAGATAAILN LFIGFLFAWVLVRYNFPGKSLLDSLVDLPFTLPTAVAGIALTTIYTPNGIIGKFFEPFGIKIAYTPIGIVIALVFIGFPF VVRTVQPVLEEFPKELEESAYCLGANRWQIFRRVIFPELISPLVTGAAMAFARGIGEYGSVVFISGNLPGKTEILPLLIV TKLEQYEYEEATGIAFIMLVISFSILLCINVIQNIAARKSE
Sequences:
>Translated_281_residues MKRENVATFRTKPYGKTAFGITLGVTVTYLSLIVIIPLGALFLKSTGIGWEGFWKLLTHERILAALYLSFGAGATAAILN LFIGFLFAWVLVRYNFPGKSLLDSLVDLPFTLPTAVAGIALTTIYTPNGIIGKFFEPFGIKIAYTPIGIVIALVFIGFPF VVRTVQPVLEEFPKELEESAYCLGANRWQIFRRVIFPELISPLVTGAAMAFARGIGEYGSVVFISGNLPGKTEILPLLIV TKLEQYEYEEATGIAFIMLVISFSILLCINVIQNIAARKSE >Mature_281_residues MKRENVATFRTKPYGKTAFGITLGVTVTYLSLIVIIPLGALFLKSTGIGWEGFWKLLTHERILAALYLSFGAGATAAILN LFIGFLFAWVLVRYNFPGKSLLDSLVDLPFTLPTAVAGIALTTIYTPNGIIGKFFEPFGIKIAYTPIGIVIALVFIGFPF VVRTVQPVLEEFPKELEESAYCLGANRWQIFRRVIFPELISPLVTGAAMAFARGIGEYGSVVFISGNLPGKTEILPLLIV TKLEQYEYEEATGIAFIMLVISFSILLCINVIQNIAARKSE
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=261, Percent_Identity=43.6781609195402, Blast_Score=221, Evalue=6e-59, Organism=Escherichia coli, GI87082099, Length=238, Percent_Identity=34.0336134453782, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI1786980, Length=218, Percent_Identity=34.4036697247706, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786254, Length=204, Percent_Identity=26.9607843137255, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787368, Length=240, Percent_Identity=27.9166666666667, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787369, Length=171, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30858; Mature: 30858
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRENVATFRTKPYGKTAFGITLGVTVTYLSLIVIIPLGALFLKSTGIGWEGFWKLLTHE CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RILAALYLSFGAGATAAILNLFIGFLFAWVLVRYNFPGKSLLDSLVDLPFTLPTAVAGIA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHH LTTIYTPNGIIGKFFEPFGIKIAYTPIGIVIALVFIGFPFVVRTVQPVLEEFPKELEESA HHEEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH YCLGANRWQIFRRVIFPELISPLVTGAAMAFARGIGEYGSVVFISGNLPGKTEILPLLIV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH TKLEQYEYEEATGIAFIMLVISFSILLCINVIQNIAARKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRENVATFRTKPYGKTAFGITLGVTVTYLSLIVIIPLGALFLKSTGIGWEGFWKLLTHE CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RILAALYLSFGAGATAAILNLFIGFLFAWVLVRYNFPGKSLLDSLVDLPFTLPTAVAGIA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHH LTTIYTPNGIIGKFFEPFGIKIAYTPIGIVIALVFIGFPFVVRTVQPVLEEFPKELEESA HHEEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH YCLGANRWQIFRRVIFPELISPLVTGAAMAFARGIGEYGSVVFISGNLPGKTEILPLLIV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH TKLEQYEYEEATGIAFIMLVISFSILLCINVIQNIAARKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]