| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is cysW
Identifier: 45658369
GI number: 45658369
Start: 3063987
End: 3064826
Strand: Reverse
Name: cysW
Synonym: LIC12527
Alternate gene names: 45658369
Gene position: 3064826-3063987 (Counterclockwise)
Preceding gene: 45658370
Following gene: 45658368
Centisome position: 71.66
GC content: 39.52
Gene sequence:
>840_bases ATGAAACAAGAATCGTTAATCGTTAGAAGTTTTCTTATCGGTGTCGTTTTTTTTCTCACCGTTTTGATTTTGATTCTTCC TATTTATACCGTCTTTCAAGAAGCATTCTCCAAAGGTTTTGGTGCTTACTGGGAAGGGATTCGGGAACCCGATACCGTTT CCGCTTTCAAATTGACTCTTTTAGTAATCGGAATCGCCGTTCCTTTGAATACTATTTTCGGAATTTTTGCTGCTTTCTCA TTGACTCGTTTTGAATTTCCGGGCAAAAGCTGGATACTCACGATCATAGATTCTCCATTTTCGGTTTCACCTGTGATCTC CGGTTTGATTTTTATTCTTCTTTTTGGAAGACAGGGGTGGTTTGGTCCTTGGTTAGAAAAATTAGACTTCAAAATTGTAT TCAACACTCCAGGGCTTGTGATCGCTACGGTTTTTATTACTCTTCCTTTTGTGGCAAGAGAACTGATTCCTGTATTGGAC GCTACCGGGATGGAAGAGGAAGAAGCGGGACTTCTTTTAGGCGCTTCTCCGATCAAAGTGTTTTTGAAAATTGTTGCACC AGGTATCAAATACGGACTGTTATACGGAATTATACTTTGTAACGCGAGAGCTATGGGAGAATTTGGTGCAGTCTCTGTTC TTTCCGGACATATCCGAGGCCAAACGAATACGTTGCCGTTACAAATTGAAGTACTTTATAATGAATATAATTCTGTGGCA GCTTTCTCGGCGGCTTCTCTTCTTGTATTTTTATCCTTAATCACTCTCGTCGCAAAACAGATCTTGGAAAGAAAAATCAA AATCGTAAAAAAAGAGGAATTTCTCCAAGAGGAGGTATAA
Upstream 100 bases:
>100_bases ACGAAGAAGCGACCGGAATTGCGTTTATTATGCTTGTAATTTCATTTAGTATATTATTATGTATTAATGTTATTCAGAAC ATCGCTGCTAGGAAAAGCGA
Downstream 100 bases:
>100_bases CGTGGGAATTGAAGTTAAGAATCTTGTAAAACGTTTTGGAAATTTTACTGCCATCGACGATCTTTCTTTAGATGTTCCTT CTGGAGAGTTAGTCGCTCTT
Product: sulfate ABC transport system permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKQESLIVRSFLIGVVFFLTVLILILPIYTVFQEAFSKGFGAYWEGIREPDTVSAFKLTLLVIGIAVPLNTIFGIFAAFS LTRFEFPGKSWILTIIDSPFSVSPVISGLIFILLFGRQGWFGPWLEKLDFKIVFNTPGLVIATVFITLPFVARELIPVLD ATGMEEEEAGLLLGASPIKVFLKIVAPGIKYGLLYGIILCNARAMGEFGAVSVLSGHIRGQTNTLPLQIEVLYNEYNSVA AFSAASLLVFLSLITLVAKQILERKIKIVKKEEFLQEEV
Sequences:
>Translated_279_residues MKQESLIVRSFLIGVVFFLTVLILILPIYTVFQEAFSKGFGAYWEGIREPDTVSAFKLTLLVIGIAVPLNTIFGIFAAFS LTRFEFPGKSWILTIIDSPFSVSPVISGLIFILLFGRQGWFGPWLEKLDFKIVFNTPGLVIATVFITLPFVARELIPVLD ATGMEEEEAGLLLGASPIKVFLKIVAPGIKYGLLYGIILCNARAMGEFGAVSVLSGHIRGQTNTLPLQIEVLYNEYNSVA AFSAASLLVFLSLITLVAKQILERKIKIVKKEEFLQEEV >Mature_279_residues MKQESLIVRSFLIGVVFFLTVLILILPIYTVFQEAFSKGFGAYWEGIREPDTVSAFKLTLLVIGIAVPLNTIFGIFAAFS LTRFEFPGKSWILTIIDSPFSVSPVISGLIFILLFGRQGWFGPWLEKLDFKIVFNTPGLVIATVFITLPFVARELIPVLD ATGMEEEEAGLLLGASPIKVFLKIVAPGIKYGLLYGIILCNARAMGEFGAVSVLSGHIRGQTNTLPLQIEVLYNEYNSVA AFSAASLLVFLSLITLVAKQILERKIKIVKKEEFLQEEV
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=270, Percent_Identity=45.9259259259259, Blast_Score=263, Evalue=9e-72, Organism=Escherichia coli, GI1788764, Length=209, Percent_Identity=37.799043062201, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI1786980, Length=212, Percent_Identity=30.6603773584906, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30829; Mature: 30829
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQESLIVRSFLIGVVFFLTVLILILPIYTVFQEAFSKGFGAYWEGIREPDTVSAFKLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH LVIGIAVPLNTIFGIFAAFSLTRFEFPGKSWILTIIDSPFSVSPVISGLIFILLFGRQGW HHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC FGPWLEKLDFKIVFNTPGLVIATVFITLPFVARELIPVLDATGMEEEEAGLLLGASPIKV CCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCHHHHH FLKIVAPGIKYGLLYGIILCNARAMGEFGAVSVLSGHIRGQTNTLPLQIEVLYNEYNSVA HHHHHCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHH AFSAASLLVFLSLITLVAKQILERKIKIVKKEEFLQEEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQESLIVRSFLIGVVFFLTVLILILPIYTVFQEAFSKGFGAYWEGIREPDTVSAFKLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHH LVIGIAVPLNTIFGIFAAFSLTRFEFPGKSWILTIIDSPFSVSPVISGLIFILLFGRQGW HHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC FGPWLEKLDFKIVFNTPGLVIATVFITLPFVARELIPVLDATGMEEEEAGLLLGASPIKV CCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCHHHHH FLKIVAPGIKYGLLYGIILCNARAMGEFGAVSVLSGHIRGQTNTLPLQIEVLYNEYNSVA HHHHHCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHH AFSAASLLVFLSLITLVAKQILERKIKIVKKEEFLQEEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]