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The map label for this gene is 45658336

Identifier: 45658336

GI number: 45658336

Start: 3020152

End: 3020640

Strand: Reverse

Name: 45658336

Synonym: LIC12494

Alternate gene names: NA

Gene position: 3020640-3020152 (Counterclockwise)

Preceding gene: 45658337

Following gene: 45658334

Centisome position: 70.62

GC content: 33.13

Gene sequence:

>489_bases
ATGAAAGTGATATTTTTAATGTACAAAGTAAAAATAACAAGATTTGTATTTAAAATCCTATTGGTACTGGGTTCTATTTT
TTGTGTTTCATACAACGTATATTCAAAGGATGTAGAAAAGATAACAATCTATGTGGATGAACATCCTCTACTTGTAGAAG
TTGTAAATACTCCCGCAGATCGAGCAAGGGGTTTGATGTATCGAAAATCCATGGGAGAAAACGAAGGTATGCTTTTTGTT
TTTGCAAAACCGGAATATTTGAGTTTTTGGATGAAAAATACTCTGATTCCTCTCAGTATTGCATATTTTAATAGTGATCG
AAGAATCACTGATATACATGATATGAAGCCAAATCAAACGAAAGAATTGTATCATTCTAGCGAAAAAGCAATGTATGCCT
TAGAAGTAAATCAGGGTTGGTTTATTAAAAGAAAAATAGGCAAATACGGAGTGCTAAAAATTCCGGATCGGGTGAGGGCG
GTTCAATAA

Upstream 100 bases:

>100_bases
CATGGATCATTTCTTTTTAAAAGAAATGATTATCAAAAAAGATTCGCTTTTACACCAAACACAAGTTAATTCATAAAAAA
CCTTTTGTAATCGGATAAAA

Downstream 100 bases:

>100_bases
TCGACTTGTTTTTGTAAGTTTATCATAAATTCTGAATATTAAAAAATATGAATTGATAAACCCTAGGAAGATTTCCTAGG
GCATTTTTAATGGTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKVIFLMYKVKITRFVFKILLVLGSIFCVSYNVYSKDVEKITIYVDEHPLLVEVVNTPADRARGLMYRKSMGENEGMLFV
FAKPEYLSFWMKNTLIPLSIAYFNSDRRITDIHDMKPNQTKELYHSSEKAMYALEVNQGWFIKRKIGKYGVLKIPDRVRA
VQ

Sequences:

>Translated_162_residues
MKVIFLMYKVKITRFVFKILLVLGSIFCVSYNVYSKDVEKITIYVDEHPLLVEVVNTPADRARGLMYRKSMGENEGMLFV
FAKPEYLSFWMKNTLIPLSIAYFNSDRRITDIHDMKPNQTKELYHSSEKAMYALEVNQGWFIKRKIGKYGVLKIPDRVRA
VQ
>Mature_162_residues
MKVIFLMYKVKITRFVFKILLVLGSIFCVSYNVYSKDVEKITIYVDEHPLLVEVVNTPADRARGLMYRKSMGENEGMLFV
FAKPEYLSFWMKNTLIPLSIAYFNSDRRITDIHDMKPNQTKELYHSSEKAMYALEVNQGWFIKRKIGKYGVLKIPDRVRA
VQ

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19030; Mature: 19030

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIFLMYKVKITRFVFKILLVLGSIFCVSYNVYSKDVEKITIYVDEHPLLVEVVNTPAD
CEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECCCHH
RARGLMYRKSMGENEGMLFVFAKPEYLSFWMKNTLIPLSIAYFNSDRRITDIHDMKPNQT
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCH
KELYHSSEKAMYALEVNQGWFIKRKIGKYGVLKIPDRVRAVQ
HHHHCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCCCC
>Mature Secondary Structure
MKVIFLMYKVKITRFVFKILLVLGSIFCVSYNVYSKDVEKITIYVDEHPLLVEVVNTPAD
CEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECCCHH
RARGLMYRKSMGENEGMLFVFAKPEYLSFWMKNTLIPLSIAYFNSDRRITDIHDMKPNQT
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCH
KELYHSSEKAMYALEVNQGWFIKRKIGKYGVLKIPDRVRAVQ
HHHHCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA