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The map label for this gene is 45658320

Identifier: 45658320

GI number: 45658320

Start: 3003061

End: 3004017

Strand: Reverse

Name: 45658320

Synonym: LIC12478

Alternate gene names: NA

Gene position: 3004017-3003061 (Counterclockwise)

Preceding gene: 45658322

Following gene: 45658319

Centisome position: 70.23

GC content: 41.07

Gene sequence:

>957_bases
ATGATCGTTCAGTTATACGGAACCAGAGGTTCGATTCCTTCTCCTCTCCGCACCAAAGAATACATTCAAAAAGTGACTCA
GATTTTGGAAATCGTCCGAGACAAGGGTCCAGAAGTTCTTACCAATATTCAAAAATTTATTTCCAATTTGCCTACCTATT
TATCCCACGTAGTAGGTGGAAATACTACTTGTGTTTCGGTCACAACCTCTTCTGGAAAAAGATTGGTTTTTGATTGTGGA
ACCGGACTTAGAATTTTAGGGGACGAGTTGATGCGGAAAGAATTTCAGAACGGAGAAGGAAAACTCTCTTTATTCTTTTC
GCATACTCACTGGGATCATATTCAAGGAATTCCATTTTTTAAACCGATCTATATCCCCGGAAATGAATTTCATTTTTATT
CACCTTTTCCGGATCTGCAGGAACGTTTAGAAAAACAACATTTTCCTGAATACTTTCCTATTCCCTTTTCGGGACTTGCT
TCCACGAAAATCTTTACCTGTTTGAATCCGGGCGAAACTTTGGATTTGGAAGGAGATTGTAGGGTCAGTTTTTATCCTCT
CAAACATCCTGGCGGATCATATGCCTACCGAGTGGAGGAAAAAGGAAAGGTATTTATTTTTGCTACGGATGCGGAGTTCA
CCGGGGAGGACTTCGATTCTATTTCGGAAATGAAACCTTTTTTTGAAAACGCAGACTTACTCGTTTTAGATGCCCAATAT
ACTTTGGACGAATCCTTCCAAAAATTTGACTGGGGACATACATCCTACACGATGGCCGTAAACTGTGCAGTTGCCTGGAA
TGTGAAAACTCTTGTATTGACTCATCACGAACCCGTTTACTCGGATGACGTGTTGGATCTCATTCTTGAGGAAGCTAGGG
CGCACTCGGTTTCGCTCGGCAATTCTTCCATGAAAATAGAACTCGCCGTCGAAGGAAACGTATATAAACTAACATGA

Upstream 100 bases:

>100_bases
ACATGATTTCTCCTCGGAATTCAAAGACAACCGTAAAACGGAATTTCTTGTTTCTCTTCTCTTTGACAGAAAATTTCGGA
AGTTAAATACTGGGCCGGAT

Downstream 100 bases:

>100_bases
AAAGTATCGGACTTCATAGAACTTCTAAAACCTTGCTCGTTATAGCCCTCTTAGGAGGACTTTTTTTTGGTTATATTCTT
TCGGAGGTAGACGAAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIVQLYGTRGSIPSPLRTKEYIQKVTQILEIVRDKGPEVLTNIQKFISNLPTYLSHVVGGNTTCVSVTTSSGKRLVFDCG
TGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFFKPIYIPGNEFHFYSPFPDLQERLEKQHFPEYFPIPFSGLA
STKIFTCLNPGETLDLEGDCRVSFYPLKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISEMKPFFENADLLVLDAQY
TLDESFQKFDWGHTSYTMAVNCAVAWNVKTLVLTHHEPVYSDDVLDLILEEARAHSVSLGNSSMKIELAVEGNVYKLT

Sequences:

>Translated_318_residues
MIVQLYGTRGSIPSPLRTKEYIQKVTQILEIVRDKGPEVLTNIQKFISNLPTYLSHVVGGNTTCVSVTTSSGKRLVFDCG
TGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFFKPIYIPGNEFHFYSPFPDLQERLEKQHFPEYFPIPFSGLA
STKIFTCLNPGETLDLEGDCRVSFYPLKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISEMKPFFENADLLVLDAQY
TLDESFQKFDWGHTSYTMAVNCAVAWNVKTLVLTHHEPVYSDDVLDLILEEARAHSVSLGNSSMKIELAVEGNVYKLT
>Mature_318_residues
MIVQLYGTRGSIPSPLRTKEYIQKVTQILEIVRDKGPEVLTNIQKFISNLPTYLSHVVGGNTTCVSVTTSSGKRLVFDCG
TGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFFKPIYIPGNEFHFYSPFPDLQERLEKQHFPEYFPIPFSGLA
STKIFTCLNPGETLDLEGDCRVSFYPLKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISEMKPFFENADLLVLDAQY
TLDESFQKFDWGHTSYTMAVNCAVAWNVKTLVLTHHEPVYSDDVLDLILEEARAHSVSLGNSSMKIELAVEGNVYKLT

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35993; Mature: 35993

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVQLYGTRGSIPSPLRTKEYIQKVTQILEIVRDKGPEVLTNIQKFISNLPTYLSHVVGG
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
NTTCVSVTTSSGKRLVFDCGTGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFF
CEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCC
KPIYIPGNEFHFYSPFPDLQERLEKQHFPEYFPIPFSGLASTKIFTCLNPGETLDLEGDC
CEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCC
RVSFYPLKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISEMKPFFENADLLVLDAQY
EEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
TLDESFQKFDWGHTSYTMAVNCAVAWNVKTLVLTHHEPVYSDDVLDLILEEARAHSVSLG
CHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEC
NSSMKIELAVEGNVYKLT
CCCEEEEEEECCCEEEEC
>Mature Secondary Structure
MIVQLYGTRGSIPSPLRTKEYIQKVTQILEIVRDKGPEVLTNIQKFISNLPTYLSHVVGG
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
NTTCVSVTTSSGKRLVFDCGTGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFF
CEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCC
KPIYIPGNEFHFYSPFPDLQERLEKQHFPEYFPIPFSGLASTKIFTCLNPGETLDLEGDC
CEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCC
RVSFYPLKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISEMKPFFENADLLVLDAQY
EEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
TLDESFQKFDWGHTSYTMAVNCAVAWNVKTLVLTHHEPVYSDDVLDLILEEARAHSVSLG
CHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEC
NSSMKIELAVEGNVYKLT
CCCEEEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA