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The map label for this gene is 45658275

Identifier: 45658275

GI number: 45658275

Start: 2949515

End: 2950330

Strand: Reverse

Name: 45658275

Synonym: LIC12430

Alternate gene names: NA

Gene position: 2950330-2949515 (Counterclockwise)

Preceding gene: 45658276

Following gene: 45658274

Centisome position: 68.98

GC content: 39.95

Gene sequence:

>816_bases
ATGAATGTTTTCATCGATAAAATAAAATATTGGTTTGCGGTCTATAGATCTCTACGTCTTGTGTTTCGGATTCTTTTGCC
CCTGATTCCGTTTTTAATTTTGTTTTTATTTTTATCTATGAAAGGTAAAAAGAAGGTGGAGGATTTAGCGGTTATCGGTC
CGATTGCGGAAAAAGCTTACGGACTCGGAACCGTTCATTCTTTGGATACGTTTCGATTTAGAGTCGGAGTTCCTACTAAA
ATTACAAAGGTATTTGTTTTAGAAGGGGATGAAGTTGTTCCTGGCCAGGGGTTGCTTCAGTTGGAAGGATCGACTATCGT
TCGTTCTCCGATTCACGGGATCGTCTCCGAAGTCGGTTATCACGAAGGAGAAGTCGCGTTTCAAAATTTTCTAGCGATTG
AAGTTTTAGGAATTGGTTCTAAATATTTAATCGTTGCTCTTGACGAACAAATTCTTCTTTCGATTCGTAAAGATCAAAAT
GCGTTGATTCGTTTTGAAGGAAAACCGAACGAAGTAATTCAAGGACGAGTTCGAGGGACTTTTTCTCACGCGGGACAATT
TTTTGCAAGAATCGAAGTGACTCATTTTCCCGAAGGAGTTTTGGCCGGAATGACCGCTGACGTGGCGATAGAAATTGGCA
AAAAAGAAAATGTGGTTTTGATTCCTAGGAAATACGAAAAGAAACAGAAAGTTATAATATTCAGAAATGGTAAATCGGTT
TCGGTCTCCTTTAAGCCGGGGTTAAAATCGGAACAGTTTGTAGAGGTAAAGGACGGAGACATACAAGCTGGGGATAAACT
TTCGGAGGTCCCGTAA

Upstream 100 bases:

>100_bases
AAAACCTAAGAAAAAACCAACCGTTCGTAAAACTGCGACGAAGGTGAAAAAGAAAAAGAAGAGATCTTAAAATCGCAGTC
GATTTTGATCGGGAGTTTTT

Downstream 100 bases:

>100_bases
TGTGGTTTATCGCGATCAGACAAATGTTAGTCAGAGGAAAACAAACTCTGACTACACTCTCGGGGATTGTTTTGGGGACG
GCAGCTTTTATCATCATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNVFIDKIKYWFAVYRSLRLVFRILLPLIPFLILFLFLSMKGKKKVEDLAVIGPIAEKAYGLGTVHSLDTFRFRVGVPTK
ITKVFVLEGDEVVPGQGLLQLEGSTIVRSPIHGIVSEVGYHEGEVAFQNFLAIEVLGIGSKYLIVALDEQILLSIRKDQN
ALIRFEGKPNEVIQGRVRGTFSHAGQFFARIEVTHFPEGVLAGMTADVAIEIGKKENVVLIPRKYEKKQKVIIFRNGKSV
SVSFKPGLKSEQFVEVKDGDIQAGDKLSEVP

Sequences:

>Translated_271_residues
MNVFIDKIKYWFAVYRSLRLVFRILLPLIPFLILFLFLSMKGKKKVEDLAVIGPIAEKAYGLGTVHSLDTFRFRVGVPTK
ITKVFVLEGDEVVPGQGLLQLEGSTIVRSPIHGIVSEVGYHEGEVAFQNFLAIEVLGIGSKYLIVALDEQILLSIRKDQN
ALIRFEGKPNEVIQGRVRGTFSHAGQFFARIEVTHFPEGVLAGMTADVAIEIGKKENVVLIPRKYEKKQKVIIFRNGKSV
SVSFKPGLKSEQFVEVKDGDIQAGDKLSEVP
>Mature_271_residues
MNVFIDKIKYWFAVYRSLRLVFRILLPLIPFLILFLFLSMKGKKKVEDLAVIGPIAEKAYGLGTVHSLDTFRFRVGVPTK
ITKVFVLEGDEVVPGQGLLQLEGSTIVRSPIHGIVSEVGYHEGEVAFQNFLAIEVLGIGSKYLIVALDEQILLSIRKDQN
ALIRFEGKPNEVIQGRVRGTFSHAGQFFARIEVTHFPEGVLAGMTADVAIEIGKKENVVLIPRKYEKKQKVIIFRNGKSV
SVSFKPGLKSEQFVEVKDGDIQAGDKLSEVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30212; Mature: 30212

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFIDKIKYWFAVYRSLRLVFRILLPLIPFLILFLFLSMKGKKKVEDLAVIGPIAEKAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCHHHHHC
GLGTVHSLDTFRFRVGVPTKITKVFVLEGDEVVPGQGLLQLEGSTIVRSPIHGIVSEVGY
CCCCEECCEEEEEEECCCCEEEEEEEEECCEECCCCCEEEECCCEEEHHHHHHHHHHCCC
HEGEVAFQNFLAIEVLGIGSKYLIVALDEQILLSIRKDQNALIRFEGKPNEVIQGRVRGT
CCCHHHHHHEEEEEEEECCCEEEEEEECHHHEEEEECCCCEEEEECCCCCHHEEEHHCCC
FSHAGQFFARIEVTHFPEGVLAGMTADVAIEIGKKENVVLIPRKYEKKQKVIIFRNGKSV
HHHHCEEEEEEEEEECCCHHHHCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCEE
SVSFKPGLKSEQFVEVKDGDIQAGDKLSEVP
EEEECCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNVFIDKIKYWFAVYRSLRLVFRILLPLIPFLILFLFLSMKGKKKVEDLAVIGPIAEKAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCHHHHHC
GLGTVHSLDTFRFRVGVPTKITKVFVLEGDEVVPGQGLLQLEGSTIVRSPIHGIVSEVGY
CCCCEECCEEEEEEECCCCEEEEEEEEECCEECCCCCEEEECCCEEEHHHHHHHHHHCCC
HEGEVAFQNFLAIEVLGIGSKYLIVALDEQILLSIRKDQNALIRFEGKPNEVIQGRVRGT
CCCHHHHHHEEEEEEEECCCEEEEEEECHHHEEEEECCCCEEEEECCCCCHHEEEHHCCC
FSHAGQFFARIEVTHFPEGVLAGMTADVAIEIGKKENVVLIPRKYEKKQKVIIFRNGKSV
HHHHCEEEEEEEEEECCCHHHHCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCEE
SVSFKPGLKSEQFVEVKDGDIQAGDKLSEVP
EEEECCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA