Click here to switch to the map view.

The map label for this gene is capA

Identifier: 45658223

GI number: 45658223

Start: 2881036

End: 2882064

Strand: Reverse

Name: capA

Synonym: LIC12377

Alternate gene names: 45658223

Gene position: 2882064-2881036 (Counterclockwise)

Preceding gene: 45658228

Following gene: 45658222

Centisome position: 67.38

GC content: 39.75

Gene sequence:

>1029_bases
ATGAGACAAACATTCATTTTATCCGTTTTATTTCTTTTTTCATTTGGGCTTTTAGGTGATTCTAAGACGATTAAGATCAA
AGCAGTGGGCGATATGGTTCCAGGAACAAATTTTCCTCAACCGTTGAATATACAAGATCCTAGATCGTTTTTATTCGGAA
AGGTGGAAAGTTATTTAAAGGGTGCGGATCTACTTTTCGGAAATTTTGAAAGTACCCTTACCGATTATCCGAACACTTCC
AAAGACACTTCTAGAAAAATGATTTTTGCATTTAGAACACCTCCCGCCTACGCTAAGGTTTTAAAGGAAGTAGGATTTGA
TATTTTAAGTATTGCTAATAATCATTCTTTGGATTTTCACGAACAGGGTTTTGTGGACACTCAGAAAAATCTTTCGGACG
TAGGAATTCGTTATACCGGAAAGAAGGGAATGATCACGTATATGAACGTGAAAGATATTTCCGTGGCCTGGATTGGGTTT
TCTCATTTAAAATCGCATAACAACGTAAATGAGATCGGAGAAGGGGTAGCGTTGGTTAAGGAAGCAAAAAAAAAGGCGCA
ACTCGTTTTTATCTCTTTTCACGGAGGAGCGGAAGGTGGACCGGCCCTACACGTAAAAAATCAAATGGAACGTTTTTACG
GAGAATATAGAGGGAACTTAGTTGAGTTTAGTCATTCACTGATTGACGCAGGCGCCGACTTAGTGATCGGTCATGGTCCT
CATTTGGTGCGAGCTATGGAATTGTATAAGGGAAGATTAATCGCTTATTCTCTCGGAAACTTTATGGGCTATAGAGCCTT
ATCTTCGAGAGGGATCGTAGGTTATTCTTTGGTTCTTGAAGTGGAAGTGGATTCTCAAGGAAAGTTCGTAAAAGGAAAGA
TCCTACCGTTACAACTGGATTCCGCTTCGATTCCAGAATACGATCCAGAAAAGAAAACGATCGATTTGATGAAAAAACTT
ACGAAAGAAGATTTTCCGGGCAAGGGACCAAAAATTGCAGATGACGGAACGATTCTTCCGGGAACGTGA

Upstream 100 bases:

>100_bases
GGGATTATTTCCATTCTATTATTCTATCGGGAAGGGTTAGAATTCTTTTGATAGAAATTCTGCTTTACGATCAGCTTCCG
ATTGAAACTCATGAAATGAC

Downstream 100 bases:

>100_bases
CATGAGTTGAGCTACGACCTAAAACGCGATCCATAGAGAACTAAATGAACCAAAGATAGCGGAGCACACCGAACGACCTA
TAGGGAGTGAAGGTTGAGTT

Product: capsule biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRQTFILSVLFLFSFGLLGDSKTIKIKAVGDMVPGTNFPQPLNIQDPRSFLFGKVESYLKGADLLFGNFESTLTDYPNTS
KDTSRKMIFAFRTPPAYAKVLKEVGFDILSIANNHSLDFHEQGFVDTQKNLSDVGIRYTGKKGMITYMNVKDISVAWIGF
SHLKSHNNVNEIGEGVALVKEAKKKAQLVFISFHGGAEGGPALHVKNQMERFYGEYRGNLVEFSHSLIDAGADLVIGHGP
HLVRAMELYKGRLIAYSLGNFMGYRALSSRGIVGYSLVLEVEVDSQGKFVKGKILPLQLDSASIPEYDPEKKTIDLMKKL
TKEDFPGKGPKIADDGTILPGT

Sequences:

>Translated_342_residues
MRQTFILSVLFLFSFGLLGDSKTIKIKAVGDMVPGTNFPQPLNIQDPRSFLFGKVESYLKGADLLFGNFESTLTDYPNTS
KDTSRKMIFAFRTPPAYAKVLKEVGFDILSIANNHSLDFHEQGFVDTQKNLSDVGIRYTGKKGMITYMNVKDISVAWIGF
SHLKSHNNVNEIGEGVALVKEAKKKAQLVFISFHGGAEGGPALHVKNQMERFYGEYRGNLVEFSHSLIDAGADLVIGHGP
HLVRAMELYKGRLIAYSLGNFMGYRALSSRGIVGYSLVLEVEVDSQGKFVKGKILPLQLDSASIPEYDPEKKTIDLMKKL
TKEDFPGKGPKIADDGTILPGT
>Mature_342_residues
MRQTFILSVLFLFSFGLLGDSKTIKIKAVGDMVPGTNFPQPLNIQDPRSFLFGKVESYLKGADLLFGNFESTLTDYPNTS
KDTSRKMIFAFRTPPAYAKVLKEVGFDILSIANNHSLDFHEQGFVDTQKNLSDVGIRYTGKKGMITYMNVKDISVAWIGF
SHLKSHNNVNEIGEGVALVKEAKKKAQLVFISFHGGAEGGPALHVKNQMERFYGEYRGNLVEFSHSLIDAGADLVIGHGP
HLVRAMELYKGRLIAYSLGNFMGYRALSSRGIVGYSLVLEVEVDSQGKFVKGKILPLQLDSASIPEYDPEKKTIDLMKKL
TKEDFPGKGPKIADDGTILPGT

Specific function: Seems to be required for maximum PGA (gamma-polyglutamic acid) production [H]

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019079 [H]

Pfam domain/function: PF09587 PGA_cap [H]

EC number: NA

Molecular weight: Translated: 37767; Mature: 37767

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTFILSVLFLFSFGLLGDSKTIKIKAVGDMVPGTNFPQPLNIQDPRSFLFGKVESYLK
CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GADLLFGNFESTLTDYPNTSKDTSRKMIFAFRTPPAYAKVLKEVGFDILSIANNHSLDFH
CCCEEECCCHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCEEECCCCCCCCCC
EQGFVDTQKNLSDVGIRYTGKKGMITYMNVKDISVAWIGFSHLKSHNNVNEIGEGVALVK
CCCCCCCCCCHHHCCEEEECCCCEEEEEECCEEEEEEEEHHHHHCCCCHHHHHHHHHHHH
EAKKKAQLVFISFHGGAEGGPALHVKNQMERFYGEYRGNLVEFSHSLIDAGADLVIGHGP
HHHCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCH
HLVRAMELYKGRLIAYSLGNFMGYRALSSRGIVGYSLVLEVEVDSQGKFVKGKILPLQLD
HHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEC
SASIPEYDPEKKTIDLMKKLTKEDFPGKGPKIADDGTILPGT
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRQTFILSVLFLFSFGLLGDSKTIKIKAVGDMVPGTNFPQPLNIQDPRSFLFGKVESYLK
CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GADLLFGNFESTLTDYPNTSKDTSRKMIFAFRTPPAYAKVLKEVGFDILSIANNHSLDFH
CCCEEECCCHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCEEECCCCCCCCCC
EQGFVDTQKNLSDVGIRYTGKKGMITYMNVKDISVAWIGFSHLKSHNNVNEIGEGVALVK
CCCCCCCCCCHHHCCEEEECCCCEEEEEECCEEEEEEEEHHHHHCCCCHHHHHHHHHHHH
EAKKKAQLVFISFHGGAEGGPALHVKNQMERFYGEYRGNLVEFSHSLIDAGADLVIGHGP
HHHCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCH
HLVRAMELYKGRLIAYSLGNFMGYRALSSRGIVGYSLVLEVEVDSQGKFVKGKILPLQLD
HHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEC
SASIPEYDPEKKTIDLMKKLTKEDFPGKGPKIADDGTILPGT
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 10486244; 11751809; 9384377 [H]