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The map label for this gene is 45658205

Identifier: 45658205

GI number: 45658205

Start: 2857824

End: 2859146

Strand: Direct

Name: 45658205

Synonym: LIC12359

Alternate gene names: NA

Gene position: 2857824-2859146 (Clockwise)

Preceding gene: 45658204

Following gene: 45658208

Centisome position: 66.82

GC content: 39.38

Gene sequence:

>1323_bases
ATGAAAACAATTCTAACGATCTTTATCAGTTTTCTCTTACTCGGAGAAAATCTATATGCAAATCGAGGAGCAGTCAGAGA
AAACCCCATCGATGTCTTAGAAAGGTCTCCAGAAAATAAAGCTCTTACCGCGCAAAGAAAGGTTCAAGTCAATATGAACC
TACCATTGAATCGCGCTCTTTTTTTTGGAACTCACGATTCTTACAATAGTAGCGCTTATCGAAGAAATCCATCCAATCAG
ACTTATACAATCACAGATCAGCTTCGCTTAGGTGCCCGTTATCTAGAATTAGAAGTCCATTGGACTACCGGTAGAAGCGG
GAATAAGGAACTTCTTCTTTGTAGAGGTAGTAATTTAAACGATCATAATGGTTGTTATAGATATGATCTTACTTTTGAAG
CGGGATTGAACGAAATCAGTCAATGGATTCAGAAACCAGAAAATCAAAATGAGGTACTGATTCTTTATATCAAAGATCGT
TTTGAAGGACATGTTTCTGAATTTATGAGAACTCTTTCCAGCAAACTGGGCACTTTGTTATATCGTCATCAATCGAGAGA
CTGCCTCAACCAATCTCCCATGGTTATGCCTAAGTTGGAAGACATGGTAAAAAGTACTAATCATCGAATTTTTCTAACAA
GCAATAACTGCTACTCTCCCGAACTTTCAGACACATGGGGATATTACTTTAGAAAAGATCCTTTTGTATCATTCCAACCA
AGCGGCTTTCGAGGATATCCAGATTGTAACTTTTCGAGAGAAACCTATCATAATTCTTTAGTTCGCGTTTACAATGATAC
AATCGCAAGAAATGCAAACGACAGAGGTGGTTCATTCACAAATAGTAATATTCAATCCATGCTCGCTTGTGAAGTAAACT
TATTTGGGTTTGATCAATTTAACGCCAATTTTGCGAAACAAGCGGTTTGGTCCTGGGATTCCGCTACCAATCAACCTCTC
AATCGAGAAGATCAAGAACATTGCGCACGGATCTCTGTAAACGGAAGATGGTCCACCCATCACTGTGATATGAATCTTAA
ATTTGCATGCAAAGACAGGAATACCGGAAATTGGATCATCACTTCCAATCGCCAAGGACCTTGGAGAGATGGTAGCAGCG
CATGTCTTCTCTATCCCCAATCACCATCAGATATTGGTCGTTATCAATTTGCCGCTCCCGCAACTCCTTATGAAAATAAA
AAACTACAAGACGCCCTAATATCGAGCGGCAATAGCCAAACAGTCTGGATCAATCTGACCAAAAAAGACGGAGATAATTG
GGCTCCGGATACGACGTTAGAAGGATATTTTTCAAATCCTTAA

Upstream 100 bases:

>100_bases
TTATAAGTCAAAAATCAGTAAGTTTTAAACTTACACTCTTATCATTCCAACTCTCTATCAATTTTTTGAGAGAAAAGCAA
AAACATTACAGGTGTAAATA

Downstream 100 bases:

>100_bases
AAAATAAATAAACGAGCCATTTGTTTTATACAAAAACGGCTCGTTTTATTTTTAAATTATACAATAGAATTCACAAGCCT
TTATTATAAAGATTCCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKTILTIFISFLLLGENLYANRGAVRENPIDVLERSPENKALTAQRKVQVNMNLPLNRALFFGTHDSYNSSAYRRNPSNQ
TYTITDQLRLGARYLELEVHWTTGRSGNKELLLCRGSNLNDHNGCYRYDLTFEAGLNEISQWIQKPENQNEVLILYIKDR
FEGHVSEFMRTLSSKLGTLLYRHQSRDCLNQSPMVMPKLEDMVKSTNHRIFLTSNNCYSPELSDTWGYYFRKDPFVSFQP
SGFRGYPDCNFSRETYHNSLVRVYNDTIARNANDRGGSFTNSNIQSMLACEVNLFGFDQFNANFAKQAVWSWDSATNQPL
NREDQEHCARISVNGRWSTHHCDMNLKFACKDRNTGNWIITSNRQGPWRDGSSACLLYPQSPSDIGRYQFAAPATPYENK
KLQDALISSGNSQTVWINLTKKDGDNWAPDTTLEGYFSNP

Sequences:

>Translated_440_residues
MKTILTIFISFLLLGENLYANRGAVRENPIDVLERSPENKALTAQRKVQVNMNLPLNRALFFGTHDSYNSSAYRRNPSNQ
TYTITDQLRLGARYLELEVHWTTGRSGNKELLLCRGSNLNDHNGCYRYDLTFEAGLNEISQWIQKPENQNEVLILYIKDR
FEGHVSEFMRTLSSKLGTLLYRHQSRDCLNQSPMVMPKLEDMVKSTNHRIFLTSNNCYSPELSDTWGYYFRKDPFVSFQP
SGFRGYPDCNFSRETYHNSLVRVYNDTIARNANDRGGSFTNSNIQSMLACEVNLFGFDQFNANFAKQAVWSWDSATNQPL
NREDQEHCARISVNGRWSTHHCDMNLKFACKDRNTGNWIITSNRQGPWRDGSSACLLYPQSPSDIGRYQFAAPATPYENK
KLQDALISSGNSQTVWINLTKKDGDNWAPDTTLEGYFSNP
>Mature_440_residues
MKTILTIFISFLLLGENLYANRGAVRENPIDVLERSPENKALTAQRKVQVNMNLPLNRALFFGTHDSYNSSAYRRNPSNQ
TYTITDQLRLGARYLELEVHWTTGRSGNKELLLCRGSNLNDHNGCYRYDLTFEAGLNEISQWIQKPENQNEVLILYIKDR
FEGHVSEFMRTLSSKLGTLLYRHQSRDCLNQSPMVMPKLEDMVKSTNHRIFLTSNNCYSPELSDTWGYYFRKDPFVSFQP
SGFRGYPDCNFSRETYHNSLVRVYNDTIARNANDRGGSFTNSNIQSMLACEVNLFGFDQFNANFAKQAVWSWDSATNQPL
NREDQEHCARISVNGRWSTHHCDMNLKFACKDRNTGNWIITSNRQGPWRDGSSACLLYPQSPSDIGRYQFAAPATPYENK
KLQDALISSGNSQTVWINLTKKDGDNWAPDTTLEGYFSNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017946
- InterPro:   IPR000909 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50539; Mature: 50539

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50041 C_TYPE_LECTIN_2 ; PS50007 PIPLC_X_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILTIFISFLLLGENLYANRGAVRENPIDVLERSPENKALTAQRKVQVNMNLPLNRAL
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCCEEE
FFGTHDSYNSSAYRRNPSNQTYTITDQLRLGARYLELEVHWTTGRSGNKELLLCRGSNLN
EEECCCCCCCCCEECCCCCCEEEEEHHHCCCEEEEEEEEEEECCCCCCCEEEEEECCCCC
DHNGCYRYDLTFEAGLNEISQWIQKPENQNEVLILYIKDRFEGHVSEFMRTLSSKLGTLL
CCCCEEEEEEEHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
YRHQSRDCLNQSPMVMPKLEDMVKSTNHRIFLTSNNCYSPELSDTWGYYFRKDPFVSFQP
HHHCCHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCCEEECC
SGFRGYPDCNFSRETYHNSLVRVYNDTIARNANDRGGSFTNSNIQSMLACEVNLFGFDQF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEEECCCC
NANFAKQAVWSWDSATNQPLNREDQEHCARISVNGRWSTHHCDMNLKFACKDRNTGNWII
CCCHHHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCEEEEECCCEEEEEEECCCCCCEEE
TSNRQGPWRDGSSACLLYPQSPSDIGRYQFAAPATPYENKKLQDALISSGNSQTVWINLT
ECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEE
KKDGDNWAPDTTLEGYFSNP
ECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTILTIFISFLLLGENLYANRGAVRENPIDVLERSPENKALTAQRKVQVNMNLPLNRAL
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCCEEE
FFGTHDSYNSSAYRRNPSNQTYTITDQLRLGARYLELEVHWTTGRSGNKELLLCRGSNLN
EEECCCCCCCCCEECCCCCCEEEEEHHHCCCEEEEEEEEEEECCCCCCCEEEEEECCCCC
DHNGCYRYDLTFEAGLNEISQWIQKPENQNEVLILYIKDRFEGHVSEFMRTLSSKLGTLL
CCCCEEEEEEEHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
YRHQSRDCLNQSPMVMPKLEDMVKSTNHRIFLTSNNCYSPELSDTWGYYFRKDPFVSFQP
HHHCCHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEECCCCEEECC
SGFRGYPDCNFSRETYHNSLVRVYNDTIARNANDRGGSFTNSNIQSMLACEVNLFGFDQF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEEECCCC
NANFAKQAVWSWDSATNQPLNREDQEHCARISVNGRWSTHHCDMNLKFACKDRNTGNWII
CCCHHHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCEEEEECCCEEEEEEECCCCCCEEE
TSNRQGPWRDGSSACLLYPQSPSDIGRYQFAAPATPYENKKLQDALISSGNSQTVWINLT
ECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEE
KKDGDNWAPDTTLEGYFSNP
ECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]