Click here to switch to the map view.

The map label for this gene is 45658042

Identifier: 45658042

GI number: 45658042

Start: 2645462

End: 2646256

Strand: Reverse

Name: 45658042

Synonym: LIC12193

Alternate gene names: NA

Gene position: 2646256-2645462 (Counterclockwise)

Preceding gene: 45658043

Following gene: 45658041

Centisome position: 61.87

GC content: 33.21

Gene sequence:

>795_bases
ATGTTTTTGTCTGAGTCTGAACAACAAATAACAGATGAATATATTCGGAATGGTTATACCATTCAAAAAGCAGCTGATAT
CAATTCGTTGGATTGGATCAGAGAAAATATTGCGAATATAGTTAGAGATATTTTAGGTTTATCTAAGGAAGAAACATCAG
ATATTCTTCTAAATCAAATTCATAAAAAAGTTTCCGTGAGTGATTTGAATTCTTTTCGTTTAAAAGTAATTCAATCTATG
AATTCCTTAGCAGATTTTCGTTATCATTACTATAGGGTTGCTAAACCATATTTAGAAACCTTAGTCGGTAATGAATTGTC
TATGCAGTTAAGAGTAAACTTAAGTATTCAATTTCCAAATGACGATAGTTCTCTTCTACCAGTTCATTCGGATACATGGT
CCGGAGATTCTCCTTATGAGATTGTAGTCTGGTTGCCGATTGTGGATTGTTATAAAACGAAATCCATGTATTTGCTTCCA
CCCGATCCTTCTAAAAAGTTAATTTCTGATTTTAAAAATCAGTCAGGAGTAAGTAGCGAAGATCTGTTTCAATCAATCTC
GAAAGACGTTCAATGGTTGGAAGTTAAGTATGGAGAAGTGCTTTTATTTGATCAAGGTTATCCTCATGGAAATAGAGTAA
ATGAAGAGTTGGATACAAGATGGTCTATGAATTGTAGGTTTAAATCAGTCTTCACTCCTTACGGTGATAAAAAACTGGGA
GAGTTTTTTGAGCCGATTACATTACGTGCTGCTTCTAAAATTGGAATGGAATATCGATTTCCAAAAGTGAAATGA

Upstream 100 bases:

>100_bases
AATTTTGATCATAATCGTTTTTGCATTTATTAAGTCGTTTTAGAATAGATAGGAATTATTTAGAAAATTTTAAATATAGC
GGTAAGATGAATTAAAAAAT

Downstream 100 bases:

>100_bases
AAAAAGGGGTAAGAGGTTATATATTTAGTCGGCCTTTTTTAGGAGAAAGAGTTCCACAGCATGTACAGAATATTGTTATC
AGAGATTACTGCCAGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MFLSESEQQITDEYIRNGYTIQKAADINSLDWIRENIANIVRDILGLSKEETSDILLNQIHKKVSVSDLNSFRLKVIQSM
NSLADFRYHYYRVAKPYLETLVGNELSMQLRVNLSIQFPNDDSSLLPVHSDTWSGDSPYEIVVWLPIVDCYKTKSMYLLP
PDPSKKLISDFKNQSGVSSEDLFQSISKDVQWLEVKYGEVLLFDQGYPHGNRVNEELDTRWSMNCRFKSVFTPYGDKKLG
EFFEPITLRAASKIGMEYRFPKVK

Sequences:

>Translated_264_residues
MFLSESEQQITDEYIRNGYTIQKAADINSLDWIRENIANIVRDILGLSKEETSDILLNQIHKKVSVSDLNSFRLKVIQSM
NSLADFRYHYYRVAKPYLETLVGNELSMQLRVNLSIQFPNDDSSLLPVHSDTWSGDSPYEIVVWLPIVDCYKTKSMYLLP
PDPSKKLISDFKNQSGVSSEDLFQSISKDVQWLEVKYGEVLLFDQGYPHGNRVNEELDTRWSMNCRFKSVFTPYGDKKLG
EFFEPITLRAASKIGMEYRFPKVK
>Mature_264_residues
MFLSESEQQITDEYIRNGYTIQKAADINSLDWIRENIANIVRDILGLSKEETSDILLNQIHKKVSVSDLNSFRLKVIQSM
NSLADFRYHYYRVAKPYLETLVGNELSMQLRVNLSIQFPNDDSSLLPVHSDTWSGDSPYEIVVWLPIVDCYKTKSMYLLP
PDPSKKLISDFKNQSGVSSEDLFQSISKDVQWLEVKYGEVLLFDQGYPHGNRVNEELDTRWSMNCRFKSVFTPYGDKKLG
EFFEPITLRAASKIGMEYRFPKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30592; Mature: 30592

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSESEQQITDEYIRNGYTIQKAADINSLDWIRENIANIVRDILGLSKEETSDILLNQI
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
HKKVSVSDLNSFRLKVIQSMNSLADFRYHYYRVAKPYLETLVGNELSMQLRVNLSIQFPN
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC
DDSSLLPVHSDTWSGDSPYEIVVWLPIVDCYKTKSMYLLPPDPSKKLISDFKNQSGVSSE
CCCCEECEECCCCCCCCCEEEEEEEECHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHH
DLFQSISKDVQWLEVKYGEVLLFDQGYPHGNRVNEELDTRWSMNCRFKSVFTPYGDKKLG
HHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHH
EFFEPITLRAASKIGMEYRFPKVK
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFLSESEQQITDEYIRNGYTIQKAADINSLDWIRENIANIVRDILGLSKEETSDILLNQI
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
HKKVSVSDLNSFRLKVIQSMNSLADFRYHYYRVAKPYLETLVGNELSMQLRVNLSIQFPN
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC
DDSSLLPVHSDTWSGDSPYEIVVWLPIVDCYKTKSMYLLPPDPSKKLISDFKNQSGVSSE
CCCCEECEECCCCCCCCCEEEEEEEECHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHH
DLFQSISKDVQWLEVKYGEVLLFDQGYPHGNRVNEELDTRWSMNCRFKSVFTPYGDKKLG
HHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHH
EFFEPITLRAASKIGMEYRFPKVK
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA