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The map label for this gene is 45657988

Identifier: 45657988

GI number: 45657988

Start: 2586519

End: 2587619

Strand: Reverse

Name: 45657988

Synonym: LIC12140

Alternate gene names: NA

Gene position: 2587619-2586519 (Counterclockwise)

Preceding gene: 45657989

Following gene: 45657987

Centisome position: 60.5

GC content: 31.7

Gene sequence:

>1101_bases
ATGAATATTTTAGTAACGGGTGCAAATGGTTTTATTGGAAAAAATCTAACTTTTCAACTAAAAGAGAGAAAAGAATTTAA
AATATTTTTTTATACCAAAGAATCTACCAAAGGCGAATTATCACAATTTATCTCTGAAGCAGATTTTATTTTTCACTTGG
CTGGAGTAAATCGCCCTAAAGAAAACCTGGAATTTAAAAAAGTAAATAGGGATTTAACCGAATCTATTTGCAGTTTATTA
AGGGAAAAAAATAAAAAAACACCTATTCTTTTTTCGTCTTCGATTCAAGCGGCATTGGATAATGAATATGGAAAGAGTAA
ATTAGAAGCTGAAAGTATTCTCAACCGTTTACAATCCGAAAATGGAAATCCTGTTTTTATTTTTCGTTTACCAAACGTAT
TTGGAAAATGGTGTCTACCTAATTACAATTCTGTAATTGCTACGTTTTGTTATAATATCGTCAGAGATTTACCTGTAAAA
ATTAACGATCCGGATGCAACTATAGTTTTAGCTTATATTGATGACGTGGTCGATAAGTTTATTAACATTTTAAATAATTT
TTCTCAAAACTTTGATCAGAACCTTACTACTTATAAAATAACTTTAGGCGAGCTCTATAGAATATTACAATCTTTTAAAC
AAAGTCGTAAAGATTTAGTAATTCCTAATGTAGGAACTGGTTTAATACGAGCTTTATACGCTACATTTACTAGTTATTTA
GATACCAATTCCTTTTCATATCCCATTCCTCAGTATAAGGATCCAAGAGGTGTATTTGTAGAGATGCTTAAGACTCAAGA
CGCGGGTCAGTTCTCTTTTTTTACGGCTCACCCTGGTGTAACACGAGGGGAACATTATCATCATAGTAAAATTGAGAAAT
TTCTTGTTATTAGCGGAAAAGCAAAATTTCGTTTTAGACATATTATAACAAACGAATATTTTGAAATTTTTACGGAAGGG
GATATTCCGCAGGTTGTAGAATCTATACCCGGATGGACCCATGATATTACTAATGTCGGTCAGGAGAAAATGGTCGTAAT
GCTTTGGGCCAGTGAAATTTTCGATAAATCTAAACCTGACACATATTCCTGTAAAATTTGA

Upstream 100 bases:

>100_bases
AAGATTAAATTTAAAAGAAATGAAGGAGATGTTGTTAAAGCTACAATTTATTAGGAATGTGATCGAAGGAAAACCAGCAG
AAATAATTGATTAGATTATC

Downstream 100 bases:

>100_bases
TTTATGAAAAAATTAAAAGTTTCCACAATTATAGGCACAAGGCCGGAAATCATCCGTCTATCTAGGGTTCTTGCAAAACT
AGATCAATATTGTGATCATA

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis K; Capsular Polysaccharide Synthesis; Capsular Polysaccharide Synthesis CapF; Capsular Polysaccharide Biosynthesis F; Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase WbjC; UDP-2-Acetamido-2 6-Dideoxy-Beta-L-Talose 4-Dehydrogenase; NAD Dependent Epimerase/Dehydratase; FnlB Protein Involved In UDP-L-FucpNAc Biosynthesis; Epimerase/Dehydratase; Capsular Polysaccharide Synthesis Cap5F; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNILVTGANGFIGKNLTFQLKERKEFKIFFYTKESTKGELSQFISEADFIFHLAGVNRPKENLEFKKVNRDLTESICSLL
REKNKKTPILFSSSIQAALDNEYGKSKLEAESILNRLQSENGNPVFIFRLPNVFGKWCLPNYNSVIATFCYNIVRDLPVK
INDPDATIVLAYIDDVVDKFINILNNFSQNFDQNLTTYKITLGELYRILQSFKQSRKDLVIPNVGTGLIRALYATFTSYL
DTNSFSYPIPQYKDPRGVFVEMLKTQDAGQFSFFTAHPGVTRGEHYHHSKIEKFLVISGKAKFRFRHIITNEYFEIFTEG
DIPQVVESIPGWTHDITNVGQEKMVVMLWASEIFDKSKPDTYSCKI

Sequences:

>Translated_366_residues
MNILVTGANGFIGKNLTFQLKERKEFKIFFYTKESTKGELSQFISEADFIFHLAGVNRPKENLEFKKVNRDLTESICSLL
REKNKKTPILFSSSIQAALDNEYGKSKLEAESILNRLQSENGNPVFIFRLPNVFGKWCLPNYNSVIATFCYNIVRDLPVK
INDPDATIVLAYIDDVVDKFINILNNFSQNFDQNLTTYKITLGELYRILQSFKQSRKDLVIPNVGTGLIRALYATFTSYL
DTNSFSYPIPQYKDPRGVFVEMLKTQDAGQFSFFTAHPGVTRGEHYHHSKIEKFLVISGKAKFRFRHIITNEYFEIFTEG
DIPQVVESIPGWTHDITNVGQEKMVVMLWASEIFDKSKPDTYSCKI
>Mature_366_residues
MNILVTGANGFIGKNLTFQLKERKEFKIFFYTKESTKGELSQFISEADFIFHLAGVNRPKENLEFKKVNRDLTESICSLL
REKNKKTPILFSSSIQAALDNEYGKSKLEAESILNRLQSENGNPVFIFRLPNVFGKWCLPNYNSVIATFCYNIVRDLPVK
INDPDATIVLAYIDDVVDKFINILNNFSQNFDQNLTTYKITLGELYRILQSFKQSRKDLVIPNVGTGLIRALYATFTSYL
DTNSFSYPIPQYKDPRGVFVEMLKTQDAGQFSFFTAHPGVTRGEHYHHSKIEKFLVISGKAKFRFRHIITNEYFEIFTEG
DIPQVVESIPGWTHDITNVGQEKMVVMLWASEIFDKSKPDTYSCKI

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42072; Mature: 42072

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILVTGANGFIGKNLTFQLKERKEFKIFFYTKESTKGELSQFISEADFIFHLAGVNRPK
CEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCH
ENLEFKKVNRDLTESICSLLREKNKKTPILFSSSIQAALDNEYGKSKLEAESILNRLQSE
HCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCC
NGNPVFIFRLPNVFGKWCLPNYNSVIATFCYNIVRDLPVKINDPDATIVLAYIDDVVDKF
CCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHH
INILNNFSQNFDQNLTTYKITLGELYRILQSFKQSRKDLVIPNVGTGLIRALYATFTSYL
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHH
DTNSFSYPIPQYKDPRGVFVEMLKTQDAGQFSFFTAHPGVTRGEHYHHSKIEKFLVISGK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCEEEEEECC
AKFRFRHIITNEYFEIFTEGDIPQVVESIPGWTHDITNVGQEKMVVMLWASEIFDKSKPD
CCEEEEHHHHHHHHHEECCCCHHHHHHHCCCCCCHHHCCCCHHEEEEEEEHHHHCCCCCC
TYSCKI
CEECCC
>Mature Secondary Structure
MNILVTGANGFIGKNLTFQLKERKEFKIFFYTKESTKGELSQFISEADFIFHLAGVNRPK
CEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCH
ENLEFKKVNRDLTESICSLLREKNKKTPILFSSSIQAALDNEYGKSKLEAESILNRLQSE
HCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCC
NGNPVFIFRLPNVFGKWCLPNYNSVIATFCYNIVRDLPVKINDPDATIVLAYIDDVVDKF
CCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHH
INILNNFSQNFDQNLTTYKITLGELYRILQSFKQSRKDLVIPNVGTGLIRALYATFTSYL
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHH
DTNSFSYPIPQYKDPRGVFVEMLKTQDAGQFSFFTAHPGVTRGEHYHHSKIEKFLVISGK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCEEEEEECC
AKFRFRHIITNEYFEIFTEGDIPQVVESIPGWTHDITNVGQEKMVVMLWASEIFDKSKPD
CCEEEEHHHHHHHHHEECCCCHHHHHHHCCCCCCHHHCCCCHHEEEEEEEHHHHCCCCCC
TYSCKI
CEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA