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The map label for this gene is yfnD [H]

Identifier: 45657980

GI number: 45657980

Start: 2575733

End: 2576755

Strand: Reverse

Name: yfnD [H]

Synonym: LIC12132

Alternate gene names: 45657980

Gene position: 2576755-2575733 (Counterclockwise)

Preceding gene: 45657981

Following gene: 45657979

Centisome position: 60.24

GC content: 31.57

Gene sequence:

>1023_bases
ATGAAATACCTCTGCACTTTATTCGATTTTAATTATTTACCCTTGGGAATATCTTTATACGAGTCTATTCGGCTGCATTT
TGGAGATTTTCATCTTTGGGTTCTTGCGATGGACGATAAGACTTGTACTTTTTTTAAAGAAAATTCCTTCGATCATGTTA
CAGTGCTCTCGTTAAGTGACATCGAGTCCGAAGATGTTTTAGTGGCAAAAGGAAATAGAACCTGGCAAGAATATTGCTGG
ACTCTTTCGCCAGTTTTACCTTCTTACGTATTGGCTAAAAATCGAGGTATAGATCACATAACGTATTTAGATTCAGATAT
ATATTTTTTTTCCGATGTAGAACCAGTTTATAATGAAATCGGAAAATATTCCGTAATGATTATACCACACCGTTTTCCAG
ATCGTCTTAAATATCTCGAAGCCAACGGAATTTATAACGTTCAAATGGTATATTTTAAACGAGACGAAATCGGAATGAAA
TGTCTTAATCGTTGGAGAGAACAATGTTTGGAATGGTGTTATAACCGATTAGAAGAAGGGCGTTTGGGAGATCAAAAGTA
TTTAGACATATGGCCTCAAGCTTACAAAAACGTATGTGTATTAAAAAACGAACAAGCAGGAGTCGCTCTCTGGAATGTGG
AAAAATATAAGATTGAATTGAAAAATGGAAGGATTTTTATCGATGATGTTCTTTTAGTATTTTATCATTTTCATATGTTT
AAGTTTTATGCGGGAAATATCTATGGAACTGGGATTTCCGATTACGGATTGAATTACAAAACTTTAAAAATTATTTATGA
AGTTTATGTGGAGCAATTGATCAAAGTGGTTTCTCGTTTTGATCTAAAATTAAGAAATTTAAATATTCTAGAAATGTGTA
ATATGATCGAAAAAAAGAATTTTTATTCATATTCTTTTTTTAATAAATTTTTTTGGAATGTTTTTCTCTACGGTTTTGTA
GTTTTGAAAAAGATTCTAAAAATTGGCCGAAATTCTCTTTTAAAAGTTTATCCGGAAGCTTGA

Upstream 100 bases:

>100_bases
CTAATATCGAATCTCAATAGTTTGAATGTAGCTTTTGTAATATATATTTTAATATTTAATAATGTATTTATGTTATACAT
TTAAAAATAAATAACTGCCA

Downstream 100 bases:

>100_bases
AATATCGATTTTGAATCTTTAGATAAAATATGTAGGTTCTGTAAATTACATCGAGTAAAATAAAATCTTGTTCTGATACA
GATTAAAATATTCAATTCTG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKYLCTLFDFNYLPLGISLYESIRLHFGDFHLWVLAMDDKTCTFFKENSFDHVTVLSLSDIESEDVLVAKGNRTWQEYCW
TLSPVLPSYVLAKNRGIDHITYLDSDIYFFSDVEPVYNEIGKYSVMIIPHRFPDRLKYLEANGIYNVQMVYFKRDEIGMK
CLNRWREQCLEWCYNRLEEGRLGDQKYLDIWPQAYKNVCVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMF
KFYAGNIYGTGISDYGLNYKTLKIIYEVYVEQLIKVVSRFDLKLRNLNILEMCNMIEKKNFYSYSFFNKFFWNVFLYGFV
VLKKILKIGRNSLLKVYPEA

Sequences:

>Translated_340_residues
MKYLCTLFDFNYLPLGISLYESIRLHFGDFHLWVLAMDDKTCTFFKENSFDHVTVLSLSDIESEDVLVAKGNRTWQEYCW
TLSPVLPSYVLAKNRGIDHITYLDSDIYFFSDVEPVYNEIGKYSVMIIPHRFPDRLKYLEANGIYNVQMVYFKRDEIGMK
CLNRWREQCLEWCYNRLEEGRLGDQKYLDIWPQAYKNVCVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMF
KFYAGNIYGTGISDYGLNYKTLKIIYEVYVEQLIKVVSRFDLKLRNLNILEMCNMIEKKNFYSYSFFNKFFWNVFLYGFV
VLKKILKIGRNSLLKVYPEA
>Mature_340_residues
MKYLCTLFDFNYLPLGISLYESIRLHFGDFHLWVLAMDDKTCTFFKENSFDHVTVLSLSDIESEDVLVAKGNRTWQEYCW
TLSPVLPSYVLAKNRGIDHITYLDSDIYFFSDVEPVYNEIGKYSVMIIPHRFPDRLKYLEANGIYNVQMVYFKRDEIGMK
CLNRWREQCLEWCYNRLEEGRLGDQKYLDIWPQAYKNVCVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMF
KFYAGNIYGTGISDYGLNYKTLKIIYEVYVEQLIKVVSRFDLKLRNLNILEMCNMIEKKNFYSYSFFNKFFWNVFLYGFV
VLKKILKIGRNSLLKVYPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 40630; Mature: 40630

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLCTLFDFNYLPLGISLYESIRLHFGDFHLWVLAMDDKTCTFFKENSFDHVTVLSLSD
CCEEEEEECCCCCCCHHHHHHHHHEEECCEEEEEEEECCCEEEEEECCCCCEEEEEEECC
IESEDVLVAKGNRTWQEYCWTLSPVLPSYVLAKNRGIDHITYLDSDIYFFSDVEPVYNEI
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHCC
GKYSVMIIPHRFPDRLKYLEANGIYNVQMVYFKRDEIGMKCLNRWREQCLEWCYNRLEEG
CCEEEEEEECCCCHHHHEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
RLGDQKYLDIWPQAYKNVCVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMF
CCCCCHHHHHCHHHHCCEEEEECCCCCEEEEEEEEEEEEEECCCEEHHHHHHHHHHHHHH
KFYAGNIYGTGISDYGLNYKTLKIIYEVYVEQLIKVVSRFDLKLRNLNILEMCNMIEKKN
HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHCC
FYSYSFFNKFFWNVFLYGFVVLKKILKIGRNSLLKVYPEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MKYLCTLFDFNYLPLGISLYESIRLHFGDFHLWVLAMDDKTCTFFKENSFDHVTVLSLSD
CCEEEEEECCCCCCCHHHHHHHHHEEECCEEEEEEEECCCEEEEEECCCCCEEEEEEECC
IESEDVLVAKGNRTWQEYCWTLSPVLPSYVLAKNRGIDHITYLDSDIYFFSDVEPVYNEI
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHCC
GKYSVMIIPHRFPDRLKYLEANGIYNVQMVYFKRDEIGMKCLNRWREQCLEWCYNRLEEG
CCEEEEEEECCCCHHHHEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
RLGDQKYLDIWPQAYKNVCVLKNEQAGVALWNVEKYKIELKNGRIFIDDVLLVFYHFHMF
CCCCCHHHHHCHHHHCCEEEEECCCCCEEEEEEEEEEEEEECCCEEHHHHHHHHHHHHHH
KFYAGNIYGTGISDYGLNYKTLKIIYEVYVEQLIKVVSRFDLKLRNLNILEMCNMIEKKN
HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHCC
FYSYSFFNKFFWNVFLYGFVVLKKILKIGRNSLLKVYPEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]