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The map label for this gene is 45657979

Identifier: 45657979

GI number: 45657979

Start: 2575164

End: 2575583

Strand: Reverse

Name: 45657979

Synonym: LIC12131

Alternate gene names: NA

Gene position: 2575583-2575164 (Counterclockwise)

Preceding gene: 45657980

Following gene: 45657978

Centisome position: 60.22

GC content: 31.67

Gene sequence:

>420_bases
ATGGATGAAATTATAGTCAAAAATTCAGGTTATATAAACCTAAAAAAAATCAGAGACGATAGAGACGGAAATTTAATTAT
ATTAGAAAGTTTGAAAGATATACCTTTTGAAATAAAACGAGTTTATTATATTAATAATTTAGAAAACTCTGTAAGTGTAA
GAGGCCAGCACGCTCATAAACAGATTGAACAAGCGATTTTTTGTGTTAGCGGGAGTTTTACCTTGAGATTAGATGATGGA
AAAACAAAACAGGAAATTTTAATGAACAAAGATAATGTGGGAGTCCTTTTGGGAAAAATGCTTTGGCATGCTATGGAAAA
TTTTTCTTCCGGTTGTATCCTTCTTGTTGCCGCTTCGGATTATTATAGAGAAGACGATTACATAAGAAATTATTCTGATT
TTATCAGGCTGGCTGGTTGA

Upstream 100 bases:

>100_bases
ATCGAGTAAAATAAAATCTTGTTCTGATACAGATTAAAATATTCAATTCTGATTTTGTGTAGTTTTTTAGCAAAAGTATT
GTGGAAATTAGGTTATTCTT

Downstream 100 bases:

>100_bases
AAAAAAATTAAATATGATTGAATATGAAAATTTACGTTTAGCGAATGAACGCTTTTTTGACGAGTATAAAACTAAACTTT
TAGAAACCATAGAAAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; Lipopolysaccharide Biosynthesis Protein; WxcM-Like; WblP Protein; FdtA-Like Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDEIIVKNSGYINLKKIRDDRDGNLIILESLKDIPFEIKRVYYINNLENSVSVRGQHAHKQIEQAIFCVSGSFTLRLDDG
KTKQEILMNKDNVGVLLGKMLWHAMENFSSGCILLVAASDYYREDDYIRNYSDFIRLAG

Sequences:

>Translated_139_residues
MDEIIVKNSGYINLKKIRDDRDGNLIILESLKDIPFEIKRVYYINNLENSVSVRGQHAHKQIEQAIFCVSGSFTLRLDDG
KTKQEILMNKDNVGVLLGKMLWHAMENFSSGCILLVAASDYYREDDYIRNYSDFIRLAG
>Mature_139_residues
MDEIIVKNSGYINLKKIRDDRDGNLIILESLKDIPFEIKRVYYINNLENSVSVRGQHAHKQIEQAIFCVSGSFTLRLDDG
KTKQEILMNKDNVGVLLGKMLWHAMENFSSGCILLVAASDYYREDDYIRNYSDFIRLAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16009; Mature: 16009

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIIVKNSGYINLKKIRDDRDGNLIILESLKDIPFEIKRVYYINNLENSVSVRGQHAHK
CCCEEEECCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCEEECCHHHHH
QIEQAIFCVSGSFTLRLDDGKTKQEILMNKDNVGVLLGKMLWHAMENFSSGCILLVAASD
HHHHHEEEECCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
YYREDDYIRNYSDFIRLAG
CCCCCCHHCCHHHHHEECC
>Mature Secondary Structure
MDEIIVKNSGYINLKKIRDDRDGNLIILESLKDIPFEIKRVYYINNLENSVSVRGQHAHK
CCCEEEECCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCEEECCHHHHH
QIEQAIFCVSGSFTLRLDDGKTKQEILMNKDNVGVLLGKMLWHAMENFSSGCILLVAASD
HHHHHEEEECCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
YYREDDYIRNYSDFIRLAG
CCCCCCHHCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA