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The map label for this gene is yqfF [H]

Identifier: 45657954

GI number: 45657954

Start: 2546159

End: 2548573

Strand: Reverse

Name: yqfF [H]

Synonym: LIC12106

Alternate gene names: 45657954

Gene position: 2548573-2546159 (Counterclockwise)

Preceding gene: 45657955

Following gene: 45657953

Centisome position: 59.59

GC content: 37.35

Gene sequence:

>2415_bases
ATGTCCAGTCCGGGAGAACAGGTCGAGTCTGCTATGGCTTGGATTACGGATACCCTTACTAGGGTCCGTTCGATTTGGTT
TGTACGAAGATTTCAAATCGTTTTAGTTCTTATTACTCTTTTGACTGTTACTTGGATGCTTGCCATTCCGTTTTTTGGTC
AGGATAAGATGGATCTTTCTCCGGATGGATTGTATTCGGAAGGTAAAACTGCGCCTGAAAAAATCATCTCCGCCAAAGAA
ATTGTCTATGAGGACGAGGATAAAACCAAGGCAAAAAAACTAACCGCTTATCAATCTGCTCCTTTTGTTTTTGATCGAGA
CTTTGGGGTTTTACAAGAACAGATCAATAATTTCATTCAAGAGGATATGGAGAATTTTCGTTCCTTCAAACCAAGCGCGG
AAGGTAGGATTTATCCGGAACTTTTAAGCGTGGTTCCTCGTTGGAAAAACCGTTCTAAAGAAGAGATTGAACTTTTATAT
AAAATTCCAGGTAAAGGAAAACTTAAGGATCTTATTCAACAATATTCTAATTTAGTATTTTCTTCTTTTTGTATATTACG
CGATTTACCTCCGGACTACGCCGCTTTAAAAACTTCGGGCGCGAGAGTACGTAATCAAGGAATCAAGGAGCAAATTTCTA
ATTTAGAAGGTGCTTATGTAATTCCTAGATCATTTTTATATAGAGATCCAGATACAGTCAATACGCTCAATCGTATGGCT
CAGGAAAAACTTTCCCGTATGGACTCCGAAATACTTCCGATTATTCAGAAAATTTCCTTAAGTTATATCTATTCTAATCC
TTCCTGTTCTTATAATTCGGAAGAAACTCTTTCCGCCAAACAATTTGCCGCGGATAGGGCGGAGCCGATCAATTCTAGAA
TTTTGGCCGGAGAGGTAATCGTTAAATCAGGAGAAATTATTACTCCCGAAATATTCAAAAAGTTGCAGATTGTAAACACT
TATGCTACACGGGCAAACTTTGCTTCTATCGTTTCTATTTTACTCATTCAGACTGTATTTGTAGTTATCATCTATATTTT
TCTTAAAAAGTACAATCCAAAACGTTTGAACGACGTTTCGAGTAACGTGATCGTTTTTTCTCTAATCTGGGTTTTGGTAT
TGAGTTGTACGGTTGCTTCTAAGATCTTTTTTAATTTTGAAACTAAATACGATTCTATTTTTTATTTTGCTCTGTTTGTT
CCTGTTGGAATGGTTTGTTTGATTATCAGTTTTATCTACGACGAACAACTTTCGATTGCTATTGGGTTTTATCTTTCCTT
TTTCATTTTTATGGCCTCTCATTATAATCCTACTTCGTTTATGTTAGGGTTTGTTTCTTGTATTGTATCTGCTAGCTACG
GTAGAAATCTTAAAAAACGGATCGATTTTATCAAAGCAGGTTTATATATTTCGGGGGTTCAGATCATCATCGCGTCTAGT
GGTTATCTTTTTGATTCTCGTAACTATTGGGTGGCGATTCCAAGCGGTTCTTGGATCAAGGATTTGATCGAATCGAATAT
ATTCAAATTATATGTTCTTTGTCTGATAAACGGTTTTGCCTGTTCTACAGCCGCACAGTTTTTACTTCCTATCTATGAGT
ATTTATTCAATGTTCCTACTCGTTTTAAATTGATGGAACTAGCAGATACGGGACATCCGTTGTTACAGGATTTACTTACT
AAGGCGCCTTCTACATATACACATACTTTTATGGTCGCTGCTCTTTCGGAACGGGCCTGTCAGAATTTAGGTTTGGATTG
GTTATTGACTAGGGTAGGAGTGTATTTTCACGATATAGGTAAAATTCCAAACGCAGGGTTTTTTGTGGAGAATCAGCATT
TGATTCCCAAAAAAGAAAATATAGATAAAAATAATCCGGCGCTTGCAGCAAAAATTGTCATCGATCACGTGTTAGACGGA
ATTGAGATGGCAAAGAAGGCAAGGCTTCCGAGAGAGGTAATCGATTTTATTCCGGAACATCACGGAACTTCCACGATGGC
GTTTTTTTATCACAAGGCTTTGTCTGAACTTTCGCCTACTCAAAAAAAGAAATTAAAAAAACAGGATTTTCAATATCCAG
GACCCAAACCGCAGAGAAAAGAAACCGCTATCGTAATGATTGCGGATTCTCTTGAAGCCGCTTCTCGTTCTTTGGACGAA
ATTACTCCGGAATCTTTGGATAATCTGATTACTAAAATTATAGGAATTAAACTCTCTGAAAATCAGTTAGACGAATGTGG
GCTGACCTTAGGCGATCTAGAAGTAATCAAGGCTTCGTTTAAGGAAGTGTTGTTGTCTAGTCTTCATTCTAGACCTAAAT
ATCCTAGTATGGAAGCCACCAAAGCATTAGAAAAAAAGAATGCGGTGGAGAACGGACACAAACAGATTAAAAACATTTCG
GGGAAAACAAACTGA

Upstream 100 bases:

>100_bases
AACACAGATCAAATTGGAATGGTCTTTTTTGGTAAAGAAGACATTACCAGACATCCTCTTGTGGAAGTGATCGTTCGTAA
ATTCGAGGAGTTGTAATCGT

Downstream 100 bases:

>100_bases
TTTCTGATTTAGTTTCTATCTCCAATGACTATGGGGAAATTTTTTGGTGGAATGAATCAGAAGTACTTATGAATTGTAAG
ATTCTTTTTCGTAAAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MSSPGEQVESAMAWITDTLTRVRSIWFVRRFQIVLVLITLLTVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISAKE
IVYEDEDKTKAKKLTAYQSAPFVFDRDFGVLQEQINNFIQEDMENFRSFKPSAEGRIYPELLSVVPRWKNRSKEEIELLY
KIPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKTSGARVRNQGIKEQISNLEGAYVIPRSFLYRDPDTVNTLNRMA
QEKLSRMDSEILPIIQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPINSRILAGEVIVKSGEIITPEIFKKLQIVNT
YATRANFASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWVLVLSCTVASKIFFNFETKYDSIFYFALFV
PVGMVCLIISFIYDEQLSIAIGFYLSFFIFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYISGVQIIIASS
GYLFDSRNYWVAIPSGSWIKDLIESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLT
KAPSTYTHTFMVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDG
IEMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLDE
ITPESLDNLITKIIGIKLSENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNAVENGHKQIKNIS
GKTN

Sequences:

>Translated_804_residues
MSSPGEQVESAMAWITDTLTRVRSIWFVRRFQIVLVLITLLTVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISAKE
IVYEDEDKTKAKKLTAYQSAPFVFDRDFGVLQEQINNFIQEDMENFRSFKPSAEGRIYPELLSVVPRWKNRSKEEIELLY
KIPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKTSGARVRNQGIKEQISNLEGAYVIPRSFLYRDPDTVNTLNRMA
QEKLSRMDSEILPIIQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPINSRILAGEVIVKSGEIITPEIFKKLQIVNT
YATRANFASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWVLVLSCTVASKIFFNFETKYDSIFYFALFV
PVGMVCLIISFIYDEQLSIAIGFYLSFFIFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYISGVQIIIASS
GYLFDSRNYWVAIPSGSWIKDLIESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLT
KAPSTYTHTFMVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDG
IEMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLDE
ITPESLDNLITKIIGIKLSENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNAVENGHKQIKNIS
GKTN
>Mature_803_residues
SSPGEQVESAMAWITDTLTRVRSIWFVRRFQIVLVLITLLTVTWMLAIPFFGQDKMDLSPDGLYSEGKTAPEKIISAKEI
VYEDEDKTKAKKLTAYQSAPFVFDRDFGVLQEQINNFIQEDMENFRSFKPSAEGRIYPELLSVVPRWKNRSKEEIELLYK
IPGKGKLKDLIQQYSNLVFSSFCILRDLPPDYAALKTSGARVRNQGIKEQISNLEGAYVIPRSFLYRDPDTVNTLNRMAQ
EKLSRMDSEILPIIQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPINSRILAGEVIVKSGEIITPEIFKKLQIVNTY
ATRANFASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVSSNVIVFSLIWVLVLSCTVASKIFFNFETKYDSIFYFALFVP
VGMVCLIISFIYDEQLSIAIGFYLSFFIFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYISGVQIIIASSG
YLFDSRNYWVAIPSGSWIKDLIESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPTRFKLMELADTGHPLLQDLLTK
APSTYTHTFMVAALSERACQNLGLDWLLTRVGVYFHDIGKIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGI
EMAKKARLPREVIDFIPEHHGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLDEI
TPESLDNLITKIIGIKLSENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEATKALEKKNAVENGHKQIKNISG
KTN

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 91069; Mature: 90938

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPGEQVESAMAWITDTLTRVRSIWFVRRFQIVLVLITLLTVTWMLAIPFFGQDKMDLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDGLYSEGKTAPEKIISAKEIVYEDEDKTKAKKLTAYQSAPFVFDRDFGVLQEQINNFIQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
EDMENFRSFKPSAEGRIYPELLSVVPRWKNRSKEEIELLYKIPGKGKLKDLIQQYSNLVF
HHHHHHHCCCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHH
SSFCILRDLPPDYAALKTSGARVRNQGIKEQISNLEGAYVIPRSFLYRDPDTVNTLNRMA
HHHHHHHCCCCCHHHHHCCCHHHHHCCHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHH
QEKLSRMDSEILPIIQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPINSRILAGEVI
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHE
VKSGEIITPEIFKKLQIVNTYATRANFASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVS
ECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SNVIVFSLIWVLVLSCTVASKIFFNFETKYDSIFYFALFVPVGMVCLIISFIYDEQLSIA
CHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IGFYLSFFIFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYISGVQIIIASS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCEEEEEECC
GYLFDSRNYWVAIPSGSWIKDLIESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPT
CCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
RFKLMELADTGHPLLQDLLTKAPSTYTHTFMVAALSERACQNLGLDWLLTRVGVYFHDIG
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
KIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGIEMAKKARLPREVIDFIPEH
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
HGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLDE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH
ITPESLDNLITKIIGIKLSENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEAT
CCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KALEKKNAVENGHKQIKNISGKTN
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSPGEQVESAMAWITDTLTRVRSIWFVRRFQIVLVLITLLTVTWMLAIPFFGQDKMDLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDGLYSEGKTAPEKIISAKEIVYEDEDKTKAKKLTAYQSAPFVFDRDFGVLQEQINNFIQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
EDMENFRSFKPSAEGRIYPELLSVVPRWKNRSKEEIELLYKIPGKGKLKDLIQQYSNLVF
HHHHHHHCCCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHH
SSFCILRDLPPDYAALKTSGARVRNQGIKEQISNLEGAYVIPRSFLYRDPDTVNTLNRMA
HHHHHHHCCCCCHHHHHCCCHHHHHCCHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHH
QEKLSRMDSEILPIIQKISLSYIYSNPSCSYNSEETLSAKQFAADRAEPINSRILAGEVI
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHE
VKSGEIITPEIFKKLQIVNTYATRANFASIVSILLIQTVFVVIIYIFLKKYNPKRLNDVS
ECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SNVIVFSLIWVLVLSCTVASKIFFNFETKYDSIFYFALFVPVGMVCLIISFIYDEQLSIA
CHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IGFYLSFFIFMASHYNPTSFMLGFVSCIVSASYGRNLKKRIDFIKAGLYISGVQIIIASS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCEEEEEECC
GYLFDSRNYWVAIPSGSWIKDLIESNIFKLYVLCLINGFACSTAAQFLLPIYEYLFNVPT
CCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
RFKLMELADTGHPLLQDLLTKAPSTYTHTFMVAALSERACQNLGLDWLLTRVGVYFHDIG
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
KIPNAGFFVENQHLIPKKENIDKNNPALAAKIVIDHVLDGIEMAKKARLPREVIDFIPEH
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
HGTSTMAFFYHKALSELSPTQKKKLKKQDFQYPGPKPQRKETAIVMIADSLEAASRSLDE
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH
ITPESLDNLITKIIGIKLSENQLDECGLTLGDLEVIKASFKEVLLSSLHSRPKYPSMEAT
CCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KALEKKNAVENGHKQIKNISGKTN
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]