BacMap

Definition	Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence.
Accession	NC_005823
Length	4,277,185

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The map label for this gene is ylmA [H]

Identifier: 45657927

GI number: 45657927

Start: 2515813

End: 2516613

Strand: Direct

Name: ylmA [H]

Synonym: LIC12079

Alternate gene names: 45657927

Gene position: 2515813-2516613 (Clockwise)

Preceding gene: 45657926

Following gene: 45657934

Centisome position: 58.82

GC content: 34.83

Gene sequence:

>801_bases
TTGAAAATCAATTCGTTATTATCCCTAGAAAAAATCAGCTATAAACCTACTGGAAAAACGATCTTAGATTCGGTAAGTTT
TGAAATCAAAACAAACGAACACTGCGTTCTTTTAGGAAGAAACGGAGCTGGCAAAAGTACTCTCGTAAATCTGATCTACG
GTATGATCTGGGCGACTTCCGGAACAATCCGTTTGTTCCAAGAAACCTATGGAGAAATAGCGATACAAGATTTGAGAAAA
AGAATCGGTATTTTAGATTCTTCCCAACAAGAAAATTCAATTCAAAGAAAACTTACTGTAAAAGATACAATACTGACCGG
GTTATTTCATACAATTGGTTATTACAGAGACCCGTCTCCGGAAGAAGAAACCAAAACGTTACAAATCTTAAAAGACTCGG
ATCTACTTTCTAAGAAGGATCAGTTATACAATACTCTTTCTTCAGGTGAAAAGAAAAAAATTTTATTTTTACGAAGTATA
GTTAATGAACCGGACTTTCTCATCATGGACGAGCCCTGTTCTTCTTTGGATCTAACCGCAAGAGAAGACTTTTTAGGATT
TTTAAAAGAATATCATTCTAAAAAAAAATTTACCTCTCTTTATATCACCCATAGGCCAGAAGAAATTCCGGATTTTTATT
CCAAAGCGGTTTTACTAAAAGAAGGAAAAGTAATCCACTTCGGCCCGATTGAGGAATGTTTCACGGAGAAAAATCTAGAA
GATCTTTACGATATTCCACTTCAAGTTCAAAGAATCGAAAACACTTGGTCAGTGATCCCAAAACAAAAACGAACCTATTA
A

Upstream 100 bases:

>100_bases
TACATAAATACGATCTCGCAGATAAAAAAATCTTCGAAGAAACCTGTGAAAAACTTAGAAAGTTATACGAAATCGCACGT
ATGGAGAATTGAAAGGCGGT

Downstream 100 bases:

>100_bases
TCTATCATACTAAAAAAATCACATTCAAAATACATAAACAAGTGATTTGATTTTATTATTCATAACTATATAATAAAGTA
TCTAATATTTTGCATGGAAC

Product: ABC transporter ATP-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKINSLLSLEKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRK
RIGILDSSQQENSIQRKLTVKDTILTGLFHTIGYYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSI
VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFTSLYITHRPEEIPDFYSKAVLLKEGKVIHFGPIEECFTEKNLE
DLYDIPLQVQRIENTWSVIPKQKRTY

Sequences:

>Translated_266_residues
MKINSLLSLEKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRK
RIGILDSSQQENSIQRKLTVKDTILTGLFHTIGYYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSI
VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFTSLYITHRPEEIPDFYSKAVLLKEGKVIHFGPIEECFTEKNLE
DLYDIPLQVQRIENTWSVIPKQKRTY
>Mature_266_residues
MKINSLLSLEKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRK
RIGILDSSQQENSIQRKLTVKDTILTGLFHTIGYYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSI
VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFTSLYITHRPEEIPDFYSKAVLLKEGKVIHFGPIEECFTEKNLE
DLYDIPLQVQRIENTWSVIPKQKRTY

Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42490749, Length=225, Percent_Identity=27.5555555555556, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI27477115, Length=205, Percent_Identity=29.7560975609756, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27436953, Length=204, Percent_Identity=27.4509803921569, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI105990541, Length=227, Percent_Identity=24.6696035242291, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI47078218, Length=214, Percent_Identity=27.1028037383178, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI45446740, Length=214, Percent_Identity=27.1028037383178, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=25.5924170616114, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI6005701, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI27262624, Length=216, Percent_Identity=25.462962962963, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI27262626, Length=216, Percent_Identity=25.462962962963, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI27881501, Length=204, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI30795238, Length=204, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=25.6521739130435, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI90421313, Length=240, Percent_Identity=25.4166666666667, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI9955963, Length=220, Percent_Identity=24.5454545454545, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1788761, Length=242, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786975, Length=198, Percent_Identity=31.8181818181818, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=27.0142180094787, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=23.8938053097345, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786253, Length=212, Percent_Identity=26.4150943396226, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787370, Length=238, Percent_Identity=25.6302521008403, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788897, Length=213, Percent_Identity=31.924882629108, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788225, Length=249, Percent_Identity=23.6947791164659, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082267, Length=227, Percent_Identity=25.9911894273128, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=26.0089686098655, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=22.0338983050847, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790544, Length=251, Percent_Identity=23.1075697211155, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787547, Length=215, Percent_Identity=24.1860465116279, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786345, Length=246, Percent_Identity=21.9512195121951, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=24.6808510638298, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=25.9615384615385, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788506, Length=219, Percent_Identity=23.7442922374429, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=23.9495798319328, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=20.8695652173913, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=221, Percent_Identity=22.6244343891403, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=22.8448275862069, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789032, Length=233, Percent_Identity=25.7510729613734, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788472, Length=235, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=25.1141552511416, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787112, Length=235, Percent_Identity=22.5531914893617, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=23.394495412844, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081834, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786654, Length=226, Percent_Identity=25.2212389380531, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787792, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790190, Length=250, Percent_Identity=24.8, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081782, Length=212, Percent_Identity=27.3584905660377, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787041, Length=216, Percent_Identity=26.3888888888889, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71996550, Length=259, Percent_Identity=30.5019305019305, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=204, Percent_Identity=28.4313725490196, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=250, Percent_Identity=24.4, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=217, Percent_Identity=26.7281105990783, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=247, Percent_Identity=24.2914979757085, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=250, Percent_Identity=26, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71992285, Length=170, Percent_Identity=28.8235294117647, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=229, Percent_Identity=25.3275109170306, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=229, Percent_Identity=25.3275109170306, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17551702, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551700, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=239, Percent_Identity=25.1046025104602, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=223, Percent_Identity=26.0089686098655, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323959, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321752, Length=240, Percent_Identity=24.1666666666667, Blast_Score=66, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6321720, Length=239, Percent_Identity=24.2677824267782, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320339, Length=231, Percent_Identity=26.8398268398268, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=229, Percent_Identity=27.0742358078603, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322957, Length=228, Percent_Identity=23.6842105263158, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI62484234, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24582014, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24582012, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221512771, Length=207, Percent_Identity=27.536231884058, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=27.1428571428571, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574744, Length=211, Percent_Identity=25.5924170616114, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585091, Length=243, Percent_Identity=25.1028806584362, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726357, Length=258, Percent_Identity=23.2558139534884, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.25 [C]

Molecular weight: Translated: 30638; Mature: 30638

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINSLLSLEKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATS
CCCHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCC
GTIRLFQETYGEIAIQDLRKRIGILDSSQQENSIQRKLTVKDTILTGLFHTIGYYRDPSP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSIVNEPDFLIMDEPCSSLDLTA
CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCH
REDFLGFLKEYHSKKKFTSLYITHRPEEIPDFYSKAVLLKEGKVIHFGPIEECFTEKNLE
HHHHHHHHHHHHCHHHEEEEEEEECCHHHHHHHHHEEEEECCCEEEECCHHHHHHHCCHH
DLYDIPLQVQRIENTWSVIPKQKRTY
HHHCCCHHEEEHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKINSLLSLEKISYKPTGKTILDSVSFEIKTNEHCVLLGRNGAGKSTLVNLIYGMIWATS
CCCHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCC
GTIRLFQETYGEIAIQDLRKRIGILDSSQQENSIQRKLTVKDTILTGLFHTIGYYRDPSP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSIVNEPDFLIMDEPCSSLDLTA
CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCH
REDFLGFLKEYHSKKKFTSLYITHRPEEIPDFYSKAVLLKEGKVIHFGPIEECFTEKNLE
HHHHHHHHHHHHCHHHEEEEEEEECCHHHHHHHHHEEEEECCCEEEECCHHHHHHHCCHH
DLYDIPLQVQRIENTWSVIPKQKRTY
HHHCCCHHEEEHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]