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The map label for this gene is 45657926

Identifier: 45657926

GI number: 45657926

Start: 2514227

End: 2515804

Strand: Direct

Name: 45657926

Synonym: LIC12078

Alternate gene names: NA

Gene position: 2514227-2515804 (Clockwise)

Preceding gene: 45657923

Following gene: 45657927

Centisome position: 58.78

GC content: 35.23

Gene sequence:

>1578_bases
TTGAAAAAGAATACAAAATACCCCGGACAAAGATTTTCGGAAAGACTGGATTTATTTAGGAAACTTGAAAAAAATTGTTC
CGAAACGGAAAAACTCATGTTAAACATACCGGAACTCACAGAGACCCTTTTAAGCGGAAAAGACATAGATGTAGAATACA
AATTCGTTTCCGAAGAAGACCATCAACAGCTCTACAATTTATTACTCAATATTTTAGGAAAAATAGACAGACTCTTTTTA
ACGGAAGTAATTTCCACAGTCCTAAAAGAAATCTTGATGAACGCAAACAAAGCGAACGCGAAAAGAATTTTCTTTCTCAA
AAAAAATTTAGACATTCATAACGCAGATCACTACTCGAAAGGAATGAGAACCTTTCAAGAGGAAATTACACATCATTGGG
ACGATCAAAAAGAAATTCTACAAAACAGCGGTTTTAAAATTCATTTCCGAGCCAAAATGATTAACAGTAGTTTGGCGATT
TTAGTGGAAAATGATTCCGCACTTCTACCTCAGGAACTAGATCGTATTAAAAAAAGAATCGAGTCCGCTAAAAAATACAA
CGACCTTTCCGATGCGTTTATGGATATTTCCGATTCTCAAGAAAGTGCCGGACTTGGTTTAGTTTTAATTCAACTCCTTT
TGAAAAATTCCGGAATAGGCTCTGATAAATTTAAAATCGATACAGATGGAAAACTGACTAGAGCGACTTTGATTGTACCT
CAACAAATCGTTCCCATAGAAATTACTACCAAACTCAAAGAAAAAATTCTAATGGAAATTGAAGGACTCCCACCTCTTCC
AAATACTTTGACTAGAATCATTTCTTTATGTAACAATCCAGATTCAGATTTAGGAATTATAGCGAGTGAAATCGAAAAAA
ATCCGGCCCTCAGTGTAGACTTGCTAAAACTTTCCAACTCGGCAGGATTTGCGAGTAGAAACAAAGTAAATACGATCGTT
CAAGCGGTTAAAGTAGTAGGTCTTAAGAACGTAAGAAACCTTCTCTATGTTTCTGGAGTAAGGAAAATCATGGATGGACG
TTATGCGAAATTACAAGAAGTTTGGAATCATTCCAACATGTGCAGTTTCTTTATTAGACAAATTGCAGGTAGAGGTGGTA
TGACTAGGGTTGCAGATATTGCCGCAGCAGGTGCACTTTTACATGATTTGGGAAAATTCATTTTACTTTCTCTCAATCAA
AAATTATTCATCAAGCTGACAAACTATCAAAAAGACAGAGACTTCGGAAGTTCTACAATCTTAGAAGAGATTTCCATCGG
AATTTCTCATCCAACGTTAGGTGCTCTTTTAGCCAAAAAATGGGATTTTCCTCCCGATTTAGTTCAAATGATAGAATTTC
ATCACAGACCTTTTATGAACGTCGGTGGCGTTTATCATGATTTAGTAGAATTGGTCTATCTAGCCAATATGATGATGGAT
TGTATCGATAAAAAAGCTTCTTTCTTTACGATAGATGAAACGATATTACATAAATACGATCTCGCAGATAAAAAAATCTT
CGAAGAAACCTGTGAAAAACTTAGAAAGTTATACGAAATCGCACGTATGGAGAATTGA

Upstream 100 bases:

>100_bases
CCAGTATTCCCTCTAATTTCTCCTCTAAAAAATAACGAATTTGACGATCTATTTCATTCTCCGTTTCTTTTATTAAAACC
ATACATTCCTCCAACATTAC

Downstream 100 bases:

>100_bases
AAGGCGGTTTGAAAATCAATTCGTTATTATCCCTAGAAAAAATCAGCTATAAACCTACTGGAAAAACGATCTTAGATTCG
GTAAGTTTTGAAATCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MKKNTKYPGQRFSERLDLFRKLEKNCSETEKLMLNIPELTETLLSGKDIDVEYKFVSEEDHQQLYNLLLNILGKIDRLFL
TEVISTVLKEILMNANKANAKRIFFLKKNLDIHNADHYSKGMRTFQEEITHHWDDQKEILQNSGFKIHFRAKMINSSLAI
LVENDSALLPQELDRIKKRIESAKKYNDLSDAFMDISDSQESAGLGLVLIQLLLKNSGIGSDKFKIDTDGKLTRATLIVP
QQIVPIEITTKLKEKILMEIEGLPPLPNTLTRIISLCNNPDSDLGIIASEIEKNPALSVDLLKLSNSAGFASRNKVNTIV
QAVKVVGLKNVRNLLYVSGVRKIMDGRYAKLQEVWNHSNMCSFFIRQIAGRGGMTRVADIAAAGALLHDLGKFILLSLNQ
KLFIKLTNYQKDRDFGSSTILEEISIGISHPTLGALLAKKWDFPPDLVQMIEFHHRPFMNVGGVYHDLVELVYLANMMMD
CIDKKASFFTIDETILHKYDLADKKIFEETCEKLRKLYEIARMEN

Sequences:

>Translated_525_residues
MKKNTKYPGQRFSERLDLFRKLEKNCSETEKLMLNIPELTETLLSGKDIDVEYKFVSEEDHQQLYNLLLNILGKIDRLFL
TEVISTVLKEILMNANKANAKRIFFLKKNLDIHNADHYSKGMRTFQEEITHHWDDQKEILQNSGFKIHFRAKMINSSLAI
LVENDSALLPQELDRIKKRIESAKKYNDLSDAFMDISDSQESAGLGLVLIQLLLKNSGIGSDKFKIDTDGKLTRATLIVP
QQIVPIEITTKLKEKILMEIEGLPPLPNTLTRIISLCNNPDSDLGIIASEIEKNPALSVDLLKLSNSAGFASRNKVNTIV
QAVKVVGLKNVRNLLYVSGVRKIMDGRYAKLQEVWNHSNMCSFFIRQIAGRGGMTRVADIAAAGALLHDLGKFILLSLNQ
KLFIKLTNYQKDRDFGSSTILEEISIGISHPTLGALLAKKWDFPPDLVQMIEFHHRPFMNVGGVYHDLVELVYLANMMMD
CIDKKASFFTIDETILHKYDLADKKIFEETCEKLRKLYEIARMEN
>Mature_525_residues
MKKNTKYPGQRFSERLDLFRKLEKNCSETEKLMLNIPELTETLLSGKDIDVEYKFVSEEDHQQLYNLLLNILGKIDRLFL
TEVISTVLKEILMNANKANAKRIFFLKKNLDIHNADHYSKGMRTFQEEITHHWDDQKEILQNSGFKIHFRAKMINSSLAI
LVENDSALLPQELDRIKKRIESAKKYNDLSDAFMDISDSQESAGLGLVLIQLLLKNSGIGSDKFKIDTDGKLTRATLIVP
QQIVPIEITTKLKEKILMEIEGLPPLPNTLTRIISLCNNPDSDLGIIASEIEKNPALSVDLLKLSNSAGFASRNKVNTIV
QAVKVVGLKNVRNLLYVSGVRKIMDGRYAKLQEVWNHSNMCSFFIRQIAGRGGMTRVADIAAAGALLHDLGKFILLSLNQ
KLFIKLTNYQKDRDFGSSTILEEISIGISHPTLGALLAKKWDFPPDLVQMIEFHHRPFMNVGGVYHDLVELVYLANMMMD
CIDKKASFFTIDETILHKYDLADKKIFEETCEKLRKLYEIARMEN

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 59791; Mature: 59791

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNTKYPGQRFSERLDLFRKLEKNCSETEKLMLNIPELTETLLSGKDIDVEYKFVSEED
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCHH
HQQLYNLLLNILGKIDRLFLTEVISTVLKEILMNANKANAKRIFFLKKNLDIHNADHYSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH
GMRTFQEEITHHWDDQKEILQNSGFKIHFRAKMINSSLAILVENDSALLPQELDRIKKRI
HHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHH
ESAKKYNDLSDAFMDISDSQESAGLGLVLIQLLLKNSGIGSDKFKIDTDGKLTRATLIVP
HHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECC
QQIVPIEITTKLKEKILMEIEGLPPLPNTLTRIISLCNNPDSDLGIIASEIEKNPALSVD
CCEECEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEE
LLKLSNSAGFASRNKVNTIVQAVKVVGLKNVRNLLYVSGVRKIMDGRYAKLQEVWNHSNM
HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
CSFFIRQIAGRGGMTRVADIAAAGALLHDLGKFILLSLNQKLFIKLTNYQKDRDFGSSTI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHH
LEEISIGISHPTLGALLAKKWDFPPDLVQMIEFHHRPFMNVGGVYHDLVELVYLANMMMD
HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH
CIDKKASFFTIDETILHKYDLADKKIFEETCEKLRKLYEIARMEN
HHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNTKYPGQRFSERLDLFRKLEKNCSETEKLMLNIPELTETLLSGKDIDVEYKFVSEED
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCHH
HQQLYNLLLNILGKIDRLFLTEVISTVLKEILMNANKANAKRIFFLKKNLDIHNADHYSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH
GMRTFQEEITHHWDDQKEILQNSGFKIHFRAKMINSSLAILVENDSALLPQELDRIKKRI
HHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHH
ESAKKYNDLSDAFMDISDSQESAGLGLVLIQLLLKNSGIGSDKFKIDTDGKLTRATLIVP
HHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECC
QQIVPIEITTKLKEKILMEIEGLPPLPNTLTRIISLCNNPDSDLGIIASEIEKNPALSVD
CCEECEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEE
LLKLSNSAGFASRNKVNTIVQAVKVVGLKNVRNLLYVSGVRKIMDGRYAKLQEVWNHSNM
HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
CSFFIRQIAGRGGMTRVADIAAAGALLHDLGKFILLSLNQKLFIKLTNYQKDRDFGSSTI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHH
LEEISIGISHPTLGALLAKKWDFPPDLVQMIEFHHRPFMNVGGVYHDLVELVYLANMMMD
HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH
CIDKKASFFTIDETILHKYDLADKKIFEETCEKLRKLYEIARMEN
HHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]