Click here to switch to the map view.

The map label for this gene is 45657658

Identifier: 45657658

GI number: 45657658

Start: 2185232

End: 2186137

Strand: Reverse

Name: 45657658

Synonym: LIC11792

Alternate gene names: NA

Gene position: 2186137-2185232 (Counterclockwise)

Preceding gene: 45657665

Following gene: 45657657

Centisome position: 51.11

GC content: 34.11

Gene sequence:

>906_bases
GTGTTTGAGATTTTTAGCGATTGTTCTCGGTTAAAATTTACGGATCACGGTGAACAAATTCTTTCTTGGGTTTGGAAACA
TCCCTTAAGTGGAAAGGAGTTGGAAATTATTTCCGGCTATAATCAAAGTGAATCTTTTTTTTCTTCCGGTTCTTATTTAA
TGTATCCATGGGTCAATCGACATACAAATGATCGAATTCGTTTGGGAGAAGAATGGATTTCATTATCCTCCATCACAAAT
AAAGATAAAAATGGTTATCCTATCCACGGGCTTGGTTTTGCTTGGAAGCGCAAGATTCTACAAAAGACGGAAGATTCTAT
CCAGTTTGAACTTTCTCCGGAAAAAGAATTATTGAATTCTTCCTTGGGAAATGTAATCGTTCGAGAGACGTATTCTCTTA
GAAGAATTTTCAACGAAGAAATTCTGACTCTCAAAACCGATTTTTTAAACCATAATTCATATCCGTTTCGATTTTGTTAT
GGGTATCATCCTTATTTTAGAATCCAATCTGACAAACAGTCTTGTGTTCTTAGATCTAATCTTTCAAAACAGATTCCTTT
AAAAGAAGATCTGACGCCTATATATCCAATTTATACAAGAGAAACGGATCGATTTAGATTAGAAAAAATTCCAGTTTTGG
ATTCTTTATTTTTTGGAGAAGACGCTTGGGTTCTTTTGCAAATTCCAGACGATTCTTATGAAGTTCGAATTCGATCTAAC
TTGTCGAATAAAAACGATATACAACTTTCTTATTTTCAAATTTATACAGACTTCTCTAAGAATAGAATTGCGATAGAACC
GATGAGTGCACCAGGAAATGCGATTGTAAATGGCTTTTCCTTAACTACCATTCTTCCCCAAGAAAAAAAGAGCGGAAGTT
TTCAAATCGTTGTGAAATGTATTTAG

Upstream 100 bases:

>100_bases
TAGGTTTTCAATTCCTTTCCAGTTCTTAAATTTTGTGTCTAGAAAAGCCGTTTTTACAAAATGAATGGAAAGGATTTTGA
ATTTCTGAAAAGTTTGCGAT

Downstream 100 bases:

>100_bases
GGCTTTTGTTTCAAAACCTCAAAAAGTTTACGTAATAATTCTTTAGAAATTTTTAATAAAATGCAGTAGTTCCTACATTT
TTGTGAAACTCAATGCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFEIFSDCSRLKFTDHGEQILSWVWKHPLSGKELEIISGYNQSESFFSSGSYLMYPWVNRHTNDRIRLGEEWISLSSITN
KDKNGYPIHGLGFAWKRKILQKTEDSIQFELSPEKELLNSSLGNVIVRETYSLRRIFNEEILTLKTDFLNHNSYPFRFCY
GYHPYFRIQSDKQSCVLRSNLSKQIPLKEDLTPIYPIYTRETDRFRLEKIPVLDSLFFGEDAWVLLQIPDDSYEVRIRSN
LSNKNDIQLSYFQIYTDFSKNRIAIEPMSAPGNAIVNGFSLTTILPQEKKSGSFQIVVKCI

Sequences:

>Translated_301_residues
MFEIFSDCSRLKFTDHGEQILSWVWKHPLSGKELEIISGYNQSESFFSSGSYLMYPWVNRHTNDRIRLGEEWISLSSITN
KDKNGYPIHGLGFAWKRKILQKTEDSIQFELSPEKELLNSSLGNVIVRETYSLRRIFNEEILTLKTDFLNHNSYPFRFCY
GYHPYFRIQSDKQSCVLRSNLSKQIPLKEDLTPIYPIYTRETDRFRLEKIPVLDSLFFGEDAWVLLQIPDDSYEVRIRSN
LSNKNDIQLSYFQIYTDFSKNRIAIEPMSAPGNAIVNGFSLTTILPQEKKSGSFQIVVKCI
>Mature_301_residues
MFEIFSDCSRLKFTDHGEQILSWVWKHPLSGKELEIISGYNQSESFFSSGSYLMYPWVNRHTNDRIRLGEEWISLSSITN
KDKNGYPIHGLGFAWKRKILQKTEDSIQFELSPEKELLNSSLGNVIVRETYSLRRIFNEEILTLKTDFLNHNSYPFRFCY
GYHPYFRIQSDKQSCVLRSNLSKQIPLKEDLTPIYPIYTRETDRFRLEKIPVLDSLFFGEDAWVLLQIPDDSYEVRIRSN
LSNKNDIQLSYFQIYTDFSKNRIAIEPMSAPGNAIVNGFSLTTILPQEKKSGSFQIVVKCI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35206; Mature: 35206

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEIFSDCSRLKFTDHGEQILSWVWKHPLSGKELEIISGYNQSESFFSSGSYLMYPWVNR
CCCCCCCHHHCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCEEEEECCCC
HTNDRIRLGEEWISLSSITNKDKNGYPIHGLGFAWKRKILQKTEDSIQFELSPEKELLNS
CCCCCEEECHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHH
SLGNVIVRETYSLRRIFNEEILTLKTDFLNHNSYPFRFCYGYHPYFRIQSDKQSCVLRSN
HHCCEEEEHHHHHHHHHCHHHEEEEEHHCCCCCCCEEEEECCCCEEEEECCCHHHHHHHC
LSKQIPLKEDLTPIYPIYTRETDRFRLEKIPVLDSLFFGEDAWVLLQIPDDSYEVRIRSN
CCCCCCCHHCCCCCCEEEECCCCCEEEECCCCHHHEEECCCCEEEEEECCCCEEEEEECC
LSNKNDIQLSYFQIYTDFSKNRIAIEPMSAPGNAIVNGFSLTTILPQEKKSGSFQIVVKC
CCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEEECEEEEEECCCCCCCCCEEEEEEE
I
C
>Mature Secondary Structure
MFEIFSDCSRLKFTDHGEQILSWVWKHPLSGKELEIISGYNQSESFFSSGSYLMYPWVNR
CCCCCCCHHHCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCEEEEECCCC
HTNDRIRLGEEWISLSSITNKDKNGYPIHGLGFAWKRKILQKTEDSIQFELSPEKELLNS
CCCCCEEECHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHH
SLGNVIVRETYSLRRIFNEEILTLKTDFLNHNSYPFRFCYGYHPYFRIQSDKQSCVLRSN
HHCCEEEEHHHHHHHHHCHHHEEEEEHHCCCCCCCEEEEECCCCEEEEECCCHHHHHHHC
LSKQIPLKEDLTPIYPIYTRETDRFRLEKIPVLDSLFFGEDAWVLLQIPDDSYEVRIRSN
CCCCCCCHHCCCCCCEEEECCCCCEEEECCCCHHHEEECCCCEEEEEECCCCEEEEEECC
LSNKNDIQLSYFQIYTDFSKNRIAIEPMSAPGNAIVNGFSLTTILPQEKKSGSFQIVVKC
CCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEEECEEEEEECCCCCCCCCEEEEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA